RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 FRAT1Q92837 279 aaPredicted RBP14.09□□□□□ -0.15
SNU13-202ENST00000355257 KDM6AO15550 1401 aaPredicted RBP14.09□□□□□ -0.15
SNU13-202ENST00000355257 MYH14Q7Z406 1995 aaKnown RBP14.08□□□□□ -0.16
SNU13-202ENST00000355257 EXOSC9Q06265 439 aaKnown RBP14.08□□□□□ -0.16
SNU13-202ENST00000355257 MVPQ14764 893 aaKnown RBP14.08□□□□□ -0.16
SNU13-202ENST00000355257 LINC00116Q8NCU8 138 aa14.08□□□□□ -0.16
SNU13-202ENST00000355257 ASAP1Q9ULH1 1129 aa14.08□□□□□ -0.16
SNU13-202ENST00000355257 CICQ96RK0 1608 aaPredicted RBP14.08□□□□□ -0.16
SNU13-202ENST00000355257 LOC102724428A0A0B4J2F2 783 aa14.07□□□□□ -0.16
SNU13-202ENST00000355257 SIK1P57059 783 aa14.07□□□□□ -0.16
SNU13-202ENST00000355257 ITPK1Q13572 414 aa14.07□□□□□ -0.16
SNU13-202ENST00000355257 NFE2L2Q16236 605 aa14.07□□□□□ -0.16
SNU13-202ENST00000355257 ALDH1L2Q3SY69 923 aa14.07□□□□□ -0.16
SNU13-202ENST00000355257 MSL1Q68DK7 614 aa14.07□□□□□ -0.16
SNU13-202ENST00000355257 SMIM5Q71RC9 77 aa14.07□□□□□ -0.16
SNU13-202ENST00000355257 FLAD1Q8NFF5 587 aa14.07□□□□□ -0.16
SNU13-202ENST00000355257 TSR2Q969E8 191 aaKnown RBP14.07□□□□□ -0.16
SNU13-202ENST00000355257 ATG3Q9NT62 314 aa14.07□□□□□ -0.16
SNU13-202ENST00000355257 TMOD3Q9NYL9 352 aa14.07□□□□□ -0.16
SNU13-202ENST00000355257 KIAA1551Q9HCM1 1747 aa14.06□□□□□ -0.16
SNU13-202ENST00000355257 PRKAR2BP31323 418 aa14.06□□□□□ -0.16
SNU13-202ENST00000355257 CALD1Q05682 793 aaKnown RBP14.06□□□□□ -0.16
SNU13-202ENST00000355257 AEBP1Q8IUX7 1158 aa14.06□□□□□ -0.16
SNU13-202ENST00000355257 DZIP1LQ8IYY4 767 aaKnown RBP14.06□□□□□ -0.16
SNU13-202ENST00000355257 ZNF784Q8NCA9 323 aaPredicted RBP14.06□□□□□ -0.16
SNU13-202ENST00000355257 DDRGK1Q96HY6 314 aa14.06□□□□□ -0.16
SNU13-202ENST00000355257 KIF13BQ9NQT8 1826 aa14.06□□□□□ -0.16
SNU13-202ENST00000355257 NEFMP07197 916 aa14.05□□□□□ -0.16
SNU13-202ENST00000355257 HMGB2P26583 209 aaKnown RBP14.05□□□□□ -0.16
SNU13-202ENST00000355257 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
SNU13-202ENST00000355257 SLC4A9Q96Q91 983 aa14.05□□□□□ -0.16
SNU13-202ENST00000355257 PCDHB15Q9Y5E8 787 aa14.05□□□□□ -0.16
SNU13-202ENST00000355257 C4AP0C0L4 1744 aa14.05□□□□□ -0.16
SNU13-202ENST00000355257 TJP1Q07157 1748 aa14.05□□□□□ -0.16
SNU13-202ENST00000355257 SSH1Q8WYL5 1049 aa14.05□□□□□ -0.16
SNU13-202ENST00000355257 ADAMTS7Q9UKP4 1686 aa14.04□□□□□ -0.16
SNU13-202ENST00000355257 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.04□□□□□ -0.16
SNU13-202ENST00000355257 ERVV-2B6SEH9 535 aa14.04□□□□□ -0.16
SNU13-202ENST00000355257 ZNF853P0CG23 659 aa14.04□□□□□ -0.16
SNU13-202ENST00000355257 AK7Q96M32 723 aa14.04□□□□□ -0.16
SNU13-202ENST00000355257 BCL2L13Q9BXK5 485 aa14.04□□□□□ -0.16
SNU13-202ENST00000355257 RWDD1Q9H446 243 aaPredicted RBP14.04□□□□□ -0.16
SNU13-202ENST00000355257 TNNQ9UQP3 1299 aa14.04□□□□□ -0.16
SNU13-202ENST00000355257 KIF16BQ96L93 1317 aa14.03□□□□□ -0.16
SNU13-202ENST00000355257 YBX3P16989 372 aaKnown RBP eCLIP14.03□□□□□ -0.166e-12■■■□□ 15.9
SNU13-202ENST00000355257 SSFA2P28290 1259 aa14.03□□□□□ -0.16
SNU13-202ENST00000355257 GPR162Q16538 588 aa14.03□□□□□ -0.16
SNU13-202ENST00000355257 ATF7IPQ6VMQ6 1270 aa14.03□□□□□ -0.16
SNU13-202ENST00000355257 DCAF5Q96JK2 942 aa14.03□□□□□ -0.16
SNU13-202ENST00000355257 SMC4Q9NTJ3 1288 aa14.03□□□□□ -0.16
SNU13-202ENST00000355257 IPO8O15397 1037 aaKnown RBP14.02□□□□□ -0.16
SNU13-202ENST00000355257 TRIM27P14373 513 aa14.02□□□□□ -0.16
SNU13-202ENST00000355257 ATP6V1AP38606 617 aa14.02□□□□□ -0.16
SNU13-202ENST00000355257 LMOD3Q0VAK6 560 aa14.02□□□□□ -0.16
SNU13-202ENST00000355257 PLEKHO1Q53GL0 409 aaPredicted RBP14.02□□□□□ -0.16
SNU13-202ENST00000355257 PHACTR3Q96KR7 559 aa14.02□□□□□ -0.16
SNU13-202ENST00000355257 IFT57Q9NWB7 429 aa14.02□□□□□ -0.16
SNU13-202ENST00000355257 PHF14O94880 888 aa14.01□□□□□ -0.17
SNU13-202ENST00000355257 HDAC1Q13547 482 aaPredicted RBP14.01□□□□□ -0.17
SNU13-202ENST00000355257 AMOTQ4VCS5 1084 aa14.01□□□□□ -0.17
SNU13-202ENST00000355257 ZNF530Q6P9A1 599 aaPredicted RBP14.01□□□□□ -0.17
SNU13-202ENST00000355257 NPM2Q86SE8 214 aaKnown RBP14.01□□□□□ -0.17
SNU13-202ENST00000355257 DDX19BQ9UMR2 479 aa14.01□□□□□ -0.17
SNU13-202ENST00000355257 CD2APQ9Y5K6 639 aa14.01□□□□□ -0.17
SNU13-202ENST00000355257 HSP90AB1P08238 724 aaKnown RBP14□□□□□ -0.17
SNU13-202ENST00000355257 RGS3P49796 1198 aa14□□□□□ -0.17
SNU13-202ENST00000355257 GNAI1P63096 354 aa14□□□□□ -0.17
SNU13-202ENST00000355257 FTSJ3Q8IY81 847 aaKnown RBP14□□□□□ -0.17
SNU13-202ENST00000355257 ARHGAP45Q92619 1136 aa14□□□□□ -0.17
SNU13-202ENST00000355257 BRCA1P38398 1863 aaKnown RBP14□□□□□ -0.17
SNU13-202ENST00000355257 SULT6B1Q6IMI4 303 aa14□□□□□ -0.17
SNU13-202ENST00000355257 NOB1Q9ULX3 412 aaKnown RBP14□□□□□ -0.17
SNU13-202ENST00000355257 MRC1P22897 1456 aa13.99□□□□□ -0.17
SNU13-202ENST00000355257 GNPATO15228 680 aa13.99□□□□□ -0.17
SNU13-202ENST00000355257 N4BP2Q86UW6 1770 aaPredicted RBP13.99□□□□□ -0.17
SNU13-202ENST00000355257 GOLGB1Q14789 3259 aaKnown RBP13.98□□□□□ -0.17
SNU13-202ENST00000355257 UBR2Q8IWV8 1755 aa13.98□□□□□ -0.17
SNU13-202ENST00000355257 VAMP4O75379 141 aa13.98□□□□□ -0.17
SNU13-202ENST00000355257 HMOX1P09601 288 aa13.98□□□□□ -0.17
SNU13-202ENST00000355257 CFAP44Q96MT7 982 aa13.98□□□□□ -0.17
SNU13-202ENST00000355257 CNTNAP4Q9C0A0 1308 aa13.97□□□□□ -0.17
SNU13-202ENST00000355257 RC3H1Q5TC82 1133 aaKnown RBP13.97□□□□□ -0.17
SNU13-202ENST00000355257 ZBTB40Q9NUA8 1239 aa13.97□□□□□ -0.17
SNU13-202ENST00000355257 PDZRN3Q9UPQ7 1066 aa13.97□□□□□ -0.17
SNU13-202ENST00000355257 SIPA1L3O60292 1781 aaPredicted RBP13.96□□□□□ -0.17
SNU13-202ENST00000355257 CABP4P57796 275 aa13.96□□□□□ -0.17
SNU13-202ENST00000355257 MRPL50Q8N5N7 158 aaKnown RBP13.96□□□□□ -0.17
SNU13-202ENST00000355257 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.17
SNU13-202ENST00000355257 GRIN3BO60391 1043 aa13.95□□□□□ -0.18
SNU13-202ENST00000355257 NFATC2IPQ8NCF5 419 aa13.95□□□□□ -0.18
SNU13-202ENST00000355257 RPS6KA4O75676 772 aa13.95□□□□□ -0.18
SNU13-202ENST00000355257 C1orf141Q5JVX7 400 aa13.95□□□□□ -0.18
SNU13-202ENST00000355257 SMC5Q8IY18 1101 aa13.95□□□□□ -0.18
SNU13-202ENST00000355257 TMEM57Q8N5G2 664 aa13.95□□□□□ -0.18
SNU13-202ENST00000355257 ARHGEF1Q92888 912 aaKnown RBP13.95□□□□□ -0.18
SNU13-202ENST00000355257 CHMP4BQ9H444 224 aaKnown RBP13.95□□□□□ -0.18
SNU13-202ENST00000355257 MBIPQ9NS73 344 aa13.95□□□□□ -0.18
SNU13-202ENST00000355257 KCPQ6ZWJ8 1503 aa13.95□□□□□ -0.18
SNU13-202ENST00000355257 PXDNLA1KZ92 1463 aa13.94□□□□□ -0.18
SNU13-202ENST00000355257 ADCY9O60503 1353 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms