RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 A0A087WWV3 80 aa21.52■■□□□ 1.03
CTSB-202ENST00000353047 CSB-PGBD3P0DP91 1061 aa21.52■■□□□ 1.03
CTSB-202ENST00000353047 ATP8B2P98198 1209 aa21.52■■□□□ 1.03
CTSB-202ENST00000353047 CWF19L2Q2TBE0 894 aaKnown RBP21.52■■□□□ 1.03
CTSB-202ENST00000353047 PTGS1P23219 599 aa21.51■■□□□ 1.03
CTSB-202ENST00000353047 PDCL2Q8N4E4 241 aa21.51■■□□□ 1.03
CTSB-202ENST00000353047 ERCC4Q92889 916 aaPredicted RBP21.51■■□□□ 1.03
CTSB-202ENST00000353047 MAP7D2Q96T17 732 aa21.51■■□□□ 1.03
CTSB-202ENST00000353047 KRT85P78386 507 aa21.51■■□□□ 1.03
CTSB-202ENST00000353047 EID1Q9Y6B2 187 aa21.51■■□□□ 1.03
CTSB-202ENST00000353047 CCDC186Q7Z3E2 898 aa21.5■■□□□ 1.03
CTSB-202ENST00000353047 SYTL4Q96C24 671 aaPredicted RBP21.5■■□□□ 1.03
CTSB-202ENST00000353047 KIF1BPQ96EK5 621 aa21.5■■□□□ 1.03
CTSB-202ENST00000353047 CCDC85AQ96PX6 553 aaPredicted RBP21.5■■□□□ 1.03
CTSB-202ENST00000353047 ZNF853P0CG23 659 aa21.5■■□□□ 1.03
CTSB-202ENST00000353047 ZNF530Q6P9A1 599 aaPredicted RBP21.5■■□□□ 1.03
CTSB-202ENST00000353047 C1orf141Q5JVX7 400 aa21.49■■□□□ 1.03
CTSB-202ENST00000353047 EDC3Q96F86 508 aaKnown RBP21.49■■□□□ 1.03
CTSB-202ENST00000353047 BLOC1S2Q6QNY1 142 aa21.49■■□□□ 1.03
CTSB-202ENST00000353047 DACT1Q9NYF0 836 aa21.49■■□□□ 1.03
CTSB-202ENST00000353047 MAP3K4Q9Y6R4 1608 aa21.48■■□□□ 1.03
CTSB-202ENST00000353047 ISM2Q6H9L7 571 aa21.48■■□□□ 1.03
CTSB-202ENST00000353047 IQSEC2Q5JU85 1478 aa21.48■■□□□ 1.03
CTSB-202ENST00000353047 SNX14Q9Y5W7 946 aa21.48■■□□□ 1.03
CTSB-202ENST00000353047 DYNC1I1O14576 645 aa21.48■■□□□ 1.03
CTSB-202ENST00000353047 LARGE1O95461 756 aa21.48■■□□□ 1.03
CTSB-202ENST00000353047 F13A1P00488 732 aa21.48■■□□□ 1.03
CTSB-202ENST00000353047 ZFYVE16Q7Z3T8 1539 aa21.47■■□□□ 1.03
CTSB-202ENST00000353047 POGZQ7Z3K3 1410 aa21.47■■□□□ 1.03
CTSB-202ENST00000353047 KCNQ3O43525 872 aa21.47■■□□□ 1.03
CTSB-202ENST00000353047 MAP3K11Q16584 847 aa21.47■■□□□ 1.03
CTSB-202ENST00000353047 FAM177A1Q8N128 213 aaPredicted RBP21.47■■□□□ 1.03
CTSB-202ENST00000353047 UBE2HP62256 183 aa21.47■■□□□ 1.03
CTSB-202ENST00000353047 CCT2P78371 535 aaKnown RBP21.47■■□□□ 1.03
CTSB-202ENST00000353047 BTBD11A6QL63 1104 aa21.47■■□□□ 1.03
CTSB-202ENST00000353047 HMGN5P82970 282 aaKnown RBP21.47■■□□□ 1.03
CTSB-202ENST00000353047 ADCK5Q3MIX3 580 aa21.47■■□□□ 1.03
CTSB-202ENST00000353047 CREBRFQ8IUR6 639 aa21.47■■□□□ 1.03
CTSB-202ENST00000353047 CCAR2Q8N163 923 aaKnown RBP21.47■■□□□ 1.03
CTSB-202ENST00000353047 LRMPQ12912 555 aa21.46■■□□□ 1.03
CTSB-202ENST00000353047 FAM227BQ96M60 508 aa21.46■■□□□ 1.03
CTSB-202ENST00000353047 SDF4Q9BRK5 362 aa21.46■■□□□ 1.03
CTSB-202ENST00000353047 PSME1Q06323 249 aa21.46■■□□□ 1.03
CTSB-202ENST00000353047 GNL2Q13823 731 aaKnown RBP21.46■■□□□ 1.03
CTSB-202ENST00000353047 DNAAF4Q8WXU2 420 aa21.46■■□□□ 1.03
CTSB-202ENST00000353047 ZMYM3Q14202 1370 aa21.45■■□□□ 1.03
CTSB-202ENST00000353047 PTH1RQ03431 593 aa21.45■■□□□ 1.02
CTSB-202ENST00000353047 LRRC59Q96AG4 307 aaKnown RBP21.45■■□□□ 1.02
CTSB-202ENST00000353047 USP44Q9H0E7 712 aa21.45■■□□□ 1.02
CTSB-202ENST00000353047 DNAJC25Q9H1X3 360 aa21.45■■□□□ 1.02
CTSB-202ENST00000353047 U2AF2P26368 475 aaKnown RBP eCLIP21.45■■□□□ 1.02
CTSB-202ENST00000353047 TRERF1Q96PN7 1200 aa21.45■■□□□ 1.02
CTSB-202ENST00000353047 ANO6Q4KMQ2 910 aa21.44■■□□□ 1.02
CTSB-202ENST00000353047 CHST3Q7LGC8 479 aa21.44■■□□□ 1.02
CTSB-202ENST00000353047 PUS7Q96PZ0 661 aaKnown RBP21.44■■□□□ 1.02
CTSB-202ENST00000353047 LGR6Q9HBX8 967 aa21.44■■□□□ 1.02
CTSB-202ENST00000353047 MYOM2P54296 1465 aa21.44■■□□□ 1.02
CTSB-202ENST00000353047 MAP3K2Q9Y2U5 619 aa21.44■■□□□ 1.02
CTSB-202ENST00000353047 ERICH4A6NGS2 130 aa21.43■■□□□ 1.02
CTSB-202ENST00000353047 RNF20Q5VTR2 975 aa21.43■■□□□ 1.02
CTSB-202ENST00000353047 RBM8AQ9Y5S9 174 aaKnown RBP21.43■■□□□ 1.02
CTSB-202ENST00000353047 PYCARDQ9ULZ3 195 aa21.43■■□□□ 1.02
CTSB-202ENST00000353047 SOS1Q07889 1333 aaPredicted RBP21.43■■□□□ 1.02
CTSB-202ENST00000353047 BIN1O00499 593 aa21.43■■□□□ 1.02
CTSB-202ENST00000353047 GLRX3O76003 335 aaKnown RBP21.43■■□□□ 1.02
CTSB-202ENST00000353047 PLXNC1O60486 1568 aa21.42■■□□□ 1.02
CTSB-202ENST00000353047 ME1P48163 572 aa21.42■■□□□ 1.02
CTSB-202ENST00000353047 RUFY3Q7L099 469 aa21.42■■□□□ 1.02
CTSB-202ENST00000353047 HOMER1Q86YM7 354 aa21.42■■□□□ 1.02
CTSB-202ENST00000353047 TMX1Q9H3N1 280 aa21.42■■□□□ 1.02
CTSB-202ENST00000353047 SPHKAPQ2M3C7 1700 aa21.42■■□□□ 1.02
CTSB-202ENST00000353047 IQGAP1P46940 1657 aa21.42■■□□□ 1.02
CTSB-202ENST00000353047 ESCO1Q5FWF5 840 aa21.41■■□□□ 1.02
CTSB-202ENST00000353047 AMOTL2Q9Y2J4 779 aa21.41■■□□□ 1.02
CTSB-202ENST00000353047 ZNF500O60304 480 aaPredicted RBP21.41■■□□□ 1.02
CTSB-202ENST00000353047 TNNT1P13805 278 aa21.41■■□□□ 1.02
CTSB-202ENST00000353047 SLC39A6Q13433 755 aa21.41■■□□□ 1.02
CTSB-202ENST00000353047 SMC2O95347 1197 aa21.41■■□□□ 1.02
CTSB-202ENST00000353047 HSP90AB4PQ58FF6 505 aa21.41■■□□□ 1.02
CTSB-202ENST00000353047 RIOK3O14730 519 aaKnown RBP21.4■■□□□ 1.02
CTSB-202ENST00000353047 ZNF165P49910 485 aa21.4■■□□□ 1.02
CTSB-202ENST00000353047 TULP4Q9NRJ4 1543 aa21.4■■□□□ 1.02
CTSB-202ENST00000353047 LIG1P18858 919 aa21.4■■□□□ 1.02
CTSB-202ENST00000353047 CDC37L1Q7L3B6 337 aa21.4■■□□□ 1.02
CTSB-202ENST00000353047 NRBP1Q9UHY1 535 aa21.4■■□□□ 1.02
CTSB-202ENST00000353047 NEXNQ0ZGT2 675 aa21.4■■□□□ 1.02
CTSB-202ENST00000353047 CCDC112Q8NEF3 446 aa21.4■■□□□ 1.02
CTSB-202ENST00000353047 YEATS2Q9ULM3 1422 aa21.39■■□□□ 1.02
CTSB-202ENST00000353047 ATP5J2-PTCD1G3V325 749 aa21.39■■□□□ 1.02
CTSB-202ENST00000353047 PTCD1O75127 700 aaKnown RBP21.39■■□□□ 1.02
CTSB-202ENST00000353047 CYP2E1P05181 493 aaPredicted RBP21.39■■□□□ 1.02
CTSB-202ENST00000353047 HSP90AA4PQ58FG1 418 aa21.39■■□□□ 1.02
CTSB-202ENST00000353047 ECHDC1Q9NTX5 307 aa21.39■■□□□ 1.02
CTSB-202ENST00000353047 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.39■■□□□ 1.02
CTSB-202ENST00000353047 FAM135BQ49AJ0 1406 aa21.39■■□□□ 1.01
CTSB-202ENST00000353047 ATP2B1P20020 1258 aa21.39■■□□□ 1.01
CTSB-202ENST00000353047 CCDC73Q6ZRK6 1079 aa21.39■■□□□ 1.01
CTSB-202ENST00000353047 CCDC129Q6ZRS4 1044 aa21.39■■□□□ 1.01
CTSB-202ENST00000353047 CLIP2Q9UDT6 1046 aa21.39■■□□□ 1.01
CTSB-202ENST00000353047 CDK11BP21127 795 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms