RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 SMC1AQ14683 1233 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP2-201ENST00000349780 LRRFIP1Q32MZ4 808 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP2-201ENST00000349780 IFFO1Q0D2I5 559 aa13.65□□□□□ -0.22
CDK5RAP2-201ENST00000349780 CPLX3Q8WVH0 158 aa13.65□□□□□ -0.22
CDK5RAP2-201ENST00000349780 E2F4Q16254 413 aa13.65□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SRCIN1Q9C0H9 1055 aa13.65□□□□□ -0.23
CDK5RAP2-201ENST00000349780 CUX1P39880 1505 aa13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SCAPERQ9BY12 1400 aa13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 TWISTNBQ3B726 338 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 ZGPATQ8N5A5 531 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 LUC7LQ9NQ29 371 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SH2B1Q9NRF2 756 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 CWC27Q6UX04 472 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 RALYLQ86SE5 291 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 GNAI2P04899 355 aa13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 PPP2R3AQ06190 1150 aa13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SEPT7Q16181 437 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 LARP6Q9BRS8 491 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 LMBRD1Q9NUN5 540 aa13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SMARCA5O60264 1052 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 ZEB2O60315 1214 aa13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 EPS15P42566 896 aa13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 TERF2Q15554 542 aa13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 CCDC50Q8IVM0 306 aa13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 PUF60Q9UHX1 559 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP2-201ENST00000349780 ATP2B1P20020 1258 aa13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 IMMTQ16891 758 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 CTCFLQ8NI51 663 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 ARAP1Q96P48 1450 aa13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 DHX16O60231 1041 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 GNAI3P08754 354 aa13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 RHOXF2BP0C7M4 288 aa13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 RHOXF2Q9BQY4 288 aa13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SPATS2LQ9NUQ6 558 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 BUB1BO60566 1050 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 ISM2Q6H9L7 571 aa13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SYT1P21579 422 aa13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 NUCB1Q02818 461 aa13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 CCAR1Q8IX12 1150 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SUDS3Q9H7L9 328 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP2-201ENST00000349780 FAM69CQ0P6D2 419 aa13.62□□□□□ -0.23
CDK5RAP2-201ENST00000349780 BIN1O00499 593 aa13.62□□□□□ -0.23
CDK5RAP2-201ENST00000349780 FSIP1Q8NA03 581 aa13.62□□□□□ -0.23
CDK5RAP2-201ENST00000349780 HFM1A2PYH4 1435 aa13.62□□□□□ -0.23
CDK5RAP2-201ENST00000349780 CEP83Q9Y592 693 aa13.62□□□□□ -0.23
CDK5RAP2-201ENST00000349780 HMOX1P09601 288 aa13.62□□□□□ -0.23
CDK5RAP2-201ENST00000349780 TAF4BQ92750 862 aa13.62□□□□□ -0.23
CDK5RAP2-201ENST00000349780 POLA1P09884 1462 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP2-201ENST00000349780 PAFAH1B1P43034 410 aa13.61□□□□□ -0.23
CDK5RAP2-201ENST00000349780 RBBP5Q15291 538 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP2-201ENST00000349780 TUBB4BP68371 445 aa13.61□□□□□ -0.23
CDK5RAP2-201ENST00000349780 PEX19P40855 299 aa13.61□□□□□ -0.23
CDK5RAP2-201ENST00000349780 HNRNPMP52272 730 aaKnown RBP eCLIP13.61□□□□□ -0.233e-6■■■■□ 24.2
CDK5RAP2-201ENST00000349780 HDAC1Q13547 482 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP2-201ENST00000349780 AOPEPQ8N6M6 819 aa13.61□□□□□ -0.23
CDK5RAP2-201ENST00000349780 CARD6Q9BX69 1037 aa13.61□□□□□ -0.23
CDK5RAP2-201ENST00000349780 DACT1Q9NYF0 836 aa13.61□□□□□ -0.23
CDK5RAP2-201ENST00000349780 PIP4K2BP78356 416 aa13.61□□□□□ -0.23
CDK5RAP2-201ENST00000349780 PRDM4Q9UKN5 801 aa13.61□□□□□ -0.23
CDK5RAP2-201ENST00000349780 CCDC196A0A1B0GTZ2 297 aa13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 RPAP2Q8IXW5 612 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 VEZTQ9HBM0 779 aa13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 MAPKBP1O60336 1514 aa13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 EIF2S2P20042 333 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 UBASH3AP57075 661 aa13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 CKAP4Q07065 602 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SPA17Q15506 151 aa13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 TMEM63CQ9P1W3 806 aa13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SWAP70Q9UH65 585 aa13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 LIG3P49916 1009 aa13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 CAPN7Q9Y6W3 813 aa13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 EVC2Q86UK5 1308 aa13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 CTAGE9A4FU28 777 aa13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 TXLNAP40222 546 aa13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SIL1Q9H173 461 aa13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 ZNF215Q9UL58 517 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP2-201ENST00000349780 NDUFAB1O14561 156 aa13.59□□□□□ -0.23
CDK5RAP2-201ENST00000349780 ARHGAP25P42331 645 aa13.59□□□□□ -0.23
CDK5RAP2-201ENST00000349780 NUP88Q99567 741 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP2-201ENST00000349780 RABEP2Q9H5N1 569 aa13.59□□□□□ -0.23
CDK5RAP2-201ENST00000349780 FRMD3A2A2Y4 597 aa13.59□□□□□ -0.23
CDK5RAP2-201ENST00000349780 ANKRD62A6NC57 917 aa13.59□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SLC3A2P08195 630 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SART3Q15020 963 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP2-201ENST00000349780 TTC22Q5TAA0 569 aa13.59□□□□□ -0.23
CDK5RAP2-201ENST00000349780 MATR3P43243 847 aaKnown RBP eCLIP13.59□□□□□ -0.232e-6■■■■□ 19.8
CDK5RAP2-201ENST00000349780 MCTP2Q6DN12 878 aa13.59□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SSH1Q8WYL5 1049 aa13.59□□□□□ -0.23
CDK5RAP2-201ENST00000349780 F13A1P00488 732 aa13.59□□□□□ -0.23
CDK5RAP2-201ENST00000349780 DNM1Q05193 864 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP2-201ENST00000349780 HLTFQ14527 1009 aaKnown RBP eCLIP13.59□□□□□ -0.237e-7■■■□□ 16.1
CDK5RAP2-201ENST00000349780 ANKS4BQ8N8V4 417 aa13.59□□□□□ -0.23
CDK5RAP2-201ENST00000349780 TRIM27P14373 513 aa13.58□□□□□ -0.23
CDK5RAP2-201ENST00000349780 CCDC6Q16204 474 aa13.58□□□□□ -0.23
CDK5RAP2-201ENST00000349780 SRGAP3O43295 1099 aa13.58□□□□□ -0.24
CDK5RAP2-201ENST00000349780 ERCC6LQ2NKX8 1250 aa13.58□□□□□ -0.24
CDK5RAP2-201ENST00000349780 SPECC1Q5M775 1068 aa13.58□□□□□ -0.24
CDK5RAP2-201ENST00000349780 MYO1CO00159 1063 aa13.58□□□□□ -0.24
CDK5RAP2-201ENST00000349780 ZSCAN20P17040 1043 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms