RNA–Protein interactions for RNA: ENST00000349299.7

H2AFV-203, Transcript of H2A histone family member V, humanhuman

TSL 2 BASIC

Gene H2AFV, Length 596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-203ENST00000349299 IFNL1Q8IU54 200 aa12.77□□□□□ -0.37
H2AFV-203ENST00000349299 PIGBQ92521 554 aa12.77□□□□□ -0.37
H2AFV-203ENST00000349299 SLC52A2Q9HAB3 445 aa12.77□□□□□ -0.37
H2AFV-203ENST00000349299 TJP1Q07157 1748 aa12.76□□□□□ -0.37
H2AFV-203ENST00000349299 TIE1P35590 1138 aa12.76□□□□□ -0.37
H2AFV-203ENST00000349299 BAG6P46379 1132 aa12.76□□□□□ -0.37
H2AFV-203ENST00000349299 ATN1P54259 1190 aaPredicted RBP12.76□□□□□ -0.37
H2AFV-203ENST00000349299 LMOD3Q0VAK6 560 aa12.76□□□□□ -0.37
H2AFV-203ENST00000349299 TEFQ10587 303 aa12.76□□□□□ -0.37
H2AFV-203ENST00000349299 DCTN1Q14203 1278 aa12.76□□□□□ -0.37
H2AFV-203ENST00000349299 NFATC2IPQ8NCF5 419 aa12.76□□□□□ -0.37
H2AFV-203ENST00000349299 TUBGCP6Q96RT7 1819 aa12.76□□□□□ -0.37
H2AFV-203ENST00000349299 LAMB4A4D0S4 1761 aa12.75□□□□□ -0.37
H2AFV-203ENST00000349299 PLSCR1O15162 318 aa12.75□□□□□ -0.37
H2AFV-203ENST00000349299 TRIM35Q9UPQ4 493 aa12.75□□□□□ -0.37
H2AFV-203ENST00000349299 KCPQ6ZWJ8 1503 aa12.74□□□□□ -0.37
H2AFV-203ENST00000349299 DEFB132Q7Z7B7 95 aa12.74□□□□□ -0.37
H2AFV-203ENST00000349299 QSER1Q2KHR3 1735 aa12.74□□□□□ -0.37
H2AFV-203ENST00000349299 PALLDQ8WX93 1383 aa12.73□□□□□ -0.37
H2AFV-203ENST00000349299 EN1Q05925 392 aaPredicted RBP12.73□□□□□ -0.37
H2AFV-203ENST00000349299 SMARCC1Q92922 1105 aaPredicted RBP12.73□□□□□ -0.37
H2AFV-203ENST00000349299 THUMPD2Q9BTF0 503 aaKnown RBP12.73□□□□□ -0.37
H2AFV-203ENST00000349299 ASAP1Q9ULH1 1129 aa12.73□□□□□ -0.37
H2AFV-203ENST00000349299 SENP3-EIF4A1A0A087X0R7 540 aa12.72□□□□□ -0.37
H2AFV-203ENST00000349299 EZH2Q15910 746 aaKnown RBP12.72□□□□□ -0.37
H2AFV-203ENST00000349299 CCDC27Q2M243 656 aa12.72□□□□□ -0.37
H2AFV-203ENST00000349299 CAMKK2Q96RR4 588 aa12.72□□□□□ -0.37
H2AFV-203ENST00000349299 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
H2AFV-203ENST00000349299 MYH14Q7Z406 1995 aaKnown RBP12.72□□□□□ -0.37
H2AFV-203ENST00000349299 C4BP0C0L5 1744 aa12.71□□□□□ -0.37
H2AFV-203ENST00000349299 TTLL13PA6NNM8 815 aa12.71□□□□□ -0.37
H2AFV-203ENST00000349299 TAF7Q15545 349 aaPredicted RBP12.71□□□□□ -0.37
H2AFV-203ENST00000349299 UBR3Q6ZT12 1888 aa12.71□□□□□ -0.37
H2AFV-203ENST00000349299 BTBD11A6QL63 1104 aa12.7□□□□□ -0.38
H2AFV-203ENST00000349299 SLC39A6Q13433 755 aa12.7□□□□□ -0.38
H2AFV-203ENST00000349299 NGEFQ8N5V2 710 aa12.7□□□□□ -0.38
H2AFV-203ENST00000349299 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
H2AFV-203ENST00000349299 ZNF790Q6PG37 636 aa12.69□□□□□ -0.38
H2AFV-203ENST00000349299 TTC5Q8N0Z6 440 aa12.69□□□□□ -0.38
H2AFV-203ENST00000349299 SLC39A7Q92504 469 aa12.69□□□□□ -0.38
H2AFV-203ENST00000349299 METRNQ9UJH8 293 aa12.69□□□□□ -0.38
H2AFV-203ENST00000349299 SALL2Q9Y467 1007 aaPredicted RBP12.69□□□□□ -0.38
H2AFV-203ENST00000349299 LOC102724428A0A0B4J2F2 783 aa12.68□□□□□ -0.38
H2AFV-203ENST00000349299 POTEB2H3BUK9 544 aa12.68□□□□□ -0.38
H2AFV-203ENST00000349299 SIK1P57059 783 aa12.68□□□□□ -0.38
H2AFV-203ENST00000349299 CALD1Q05682 793 aaKnown RBP12.68□□□□□ -0.38
H2AFV-203ENST00000349299 SLC27A3Q5K4L6 730 aa12.68□□□□□ -0.38
H2AFV-203ENST00000349299 WWC1Q8IX03 1113 aa12.68□□□□□ -0.38
H2AFV-203ENST00000349299 CCNL1Q9UK58 526 aaPredicted RBP12.68□□□□□ -0.38
H2AFV-203ENST00000349299 PTCD1O75127 700 aaKnown RBP12.67□□□□□ -0.38
H2AFV-203ENST00000349299 C7P10643 843 aa12.67□□□□□ -0.38
H2AFV-203ENST00000349299 CHRM1P11229 460 aaPredicted RBP12.67□□□□□ -0.38
H2AFV-203ENST00000349299 LRRC4BQ9NT99 713 aa12.67□□□□□ -0.38
H2AFV-203ENST00000349299 BABAM1Q9NWV8 329 aa12.67□□□□□ -0.38
H2AFV-203ENST00000349299 MIS18AQ9NYP9 233 aa12.67□□□□□ -0.38
H2AFV-203ENST00000349299 KCNQ3O43525 872 aa12.66□□□□□ -0.38
H2AFV-203ENST00000349299 SLC4A9Q96Q91 983 aa12.66□□□□□ -0.38
H2AFV-203ENST00000349299 TSPYL4Q9UJ04 414 aa12.66□□□□□ -0.38
H2AFV-203ENST00000349299 LAS1LQ9Y4W2 734 aaKnown RBP12.66□□□□□ -0.38
H2AFV-203ENST00000349299 CACNA1FO60840 1977 aa12.66□□□□□ -0.38
H2AFV-203ENST00000349299 HEG1Q9ULI3 1381 aa12.66□□□□□ -0.38
H2AFV-203ENST00000349299 C4AP0C0L4 1744 aa12.65□□□□□ -0.38
H2AFV-203ENST00000349299 IL16Q14005 1332 aa12.65□□□□□ -0.38
H2AFV-203ENST00000349299 CHL1O00533 1208 aa12.65□□□□□ -0.38
H2AFV-203ENST00000349299 ZNF853P0CG23 659 aa12.65□□□□□ -0.38
H2AFV-203ENST00000349299 ATP6V1AP38606 617 aa12.65□□□□□ -0.38
H2AFV-203ENST00000349299 KCNQ4P56696 695 aa12.65□□□□□ -0.38
H2AFV-203ENST00000349299 GNAI1P63096 354 aa12.65□□□□□ -0.38
H2AFV-203ENST00000349299 WDR63Q8IWG1 891 aa12.65□□□□□ -0.38
H2AFV-203ENST00000349299 ZNF496Q96IT1 587 aaPredicted RBP12.65□□□□□ -0.38
H2AFV-203ENST00000349299 CFAP44Q96MT7 982 aa12.65□□□□□ -0.38
H2AFV-203ENST00000349299 FMNL2Q96PY5 1086 aa12.65□□□□□ -0.38
H2AFV-203ENST00000349299 IFT57Q9NWB7 429 aa12.65□□□□□ -0.38
H2AFV-203ENST00000349299 PCDHB8Q9UN66 801 aa12.65□□□□□ -0.38
H2AFV-203ENST00000349299 ZNF521Q96K83 1311 aa12.64□□□□□ -0.39
H2AFV-203ENST00000349299 CASZ1Q86V15 1759 aa12.64□□□□□ -0.39
H2AFV-203ENST00000349299 ITPK1Q13572 414 aa12.64□□□□□ -0.39
H2AFV-203ENST00000349299 VSIG10Q8N0Z9 540 aa12.64□□□□□ -0.39
H2AFV-203ENST00000349299 CIZ1Q9ULV3 898 aaPredicted RBP12.64□□□□□ -0.39
H2AFV-203ENST00000349299 HMGB2P26583 209 aaKnown RBP12.63□□□□□ -0.39
H2AFV-203ENST00000349299 EIF4A1P60842 406 aaKnown RBP12.63□□□□□ -0.39
H2AFV-203ENST00000349299 HNRNPUQ00839 825 aaKnown RBP eCLIP12.63□□□□□ -0.39
H2AFV-203ENST00000349299 DNAJC10Q8IXB1 793 aa12.62□□□□□ -0.39
H2AFV-203ENST00000349299 LINC00116Q8NCU8 138 aa12.62□□□□□ -0.39
H2AFV-203ENST00000349299 ANO8Q9HCE9 1232 aaPredicted RBP12.62□□□□□ -0.39
H2AFV-203ENST00000349299 MBIPQ9NS73 344 aa12.62□□□□□ -0.39
H2AFV-203ENST00000349299 NBPF14Q5TI25 921 aa12.61□□□□□ -0.39
H2AFV-203ENST00000349299 TMEM106CQ9BVX2 250 aa12.61□□□□□ -0.39
H2AFV-203ENST00000349299 BCORQ6W2J9 1755 aa12.61□□□□□ -0.39
H2AFV-203ENST00000349299 POTEFA5A3E0 1075 aa12.6□□□□□ -0.39
H2AFV-203ENST00000349299 SNRPA1P09661 255 aaKnown RBP12.6□□□□□ -0.39
H2AFV-203ENST00000349299 GOLGA2Q08379 1002 aa12.6□□□□□ -0.39
H2AFV-203ENST00000349299 ZNF827Q17R98 1081 aa12.6□□□□□ -0.39
H2AFV-203ENST00000349299 TSR2Q969E8 191 aaKnown RBP12.6□□□□□ -0.39
H2AFV-203ENST00000349299 TEX13AQ9BXU3 409 aaPredicted RBP12.6□□□□□ -0.39
H2AFV-203ENST00000349299 STK32BQ9NY57 414 aa12.6□□□□□ -0.39
H2AFV-203ENST00000349299 CNTNAP4Q9C0A0 1308 aa12.6□□□□□ -0.39
H2AFV-203ENST00000349299 PRAMEF22A3QJZ6 481 aa12.59□□□□□ -0.39
H2AFV-203ENST00000349299 GIGYF1O75420 1035 aaPredicted RBP12.59□□□□□ -0.39
H2AFV-203ENST00000349299 CYP19A1P11511 503 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms