RNA–Protein interactions for RNA: ENST00000345093.8

RNF41-201, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 5,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-201ENST00000345093 FAM43AQ8N2R8 423 aa11.63□□□□□ -0.55
RNF41-201ENST00000345093 EDC4Q6P2E9 1401 aaKnown RBP11.63□□□□□ -0.55
RNF41-201ENST00000345093 NOC3LQ8WTT2 800 aaKnown RBP11.62□□□□□ -0.55
RNF41-201ENST00000345093 MAST3O60307 1309 aa11.62□□□□□ -0.55
RNF41-201ENST00000345093 KIF1BPQ96EK5 621 aa11.62□□□□□ -0.55
RNF41-201ENST00000345093 IPO7O95373 1038 aaKnown RBP11.62□□□□□ -0.55
RNF41-201ENST00000345093 APBA3O96018 575 aa11.62□□□□□ -0.55
RNF41-201ENST00000345093 JMYQ8N9B5 988 aa11.61□□□□□ -0.55
RNF41-201ENST00000345093 SMC3Q9UQE7 1217 aa11.61□□□□□ -0.55
RNF41-201ENST00000345093 THRAP3Q9Y2W1 955 aaKnown RBP11.61□□□□□ -0.55
RNF41-201ENST00000345093 RDXP35241 583 aaKnown RBP11.61□□□□□ -0.55
RNF41-201ENST00000345093 LETM1O95202 739 aaPredicted RBP11.61□□□□□ -0.55
RNF41-201ENST00000345093 SRGAP3O43295 1099 aa11.61□□□□□ -0.55
RNF41-201ENST00000345093 RABEP1Q15276 862 aa11.61□□□□□ -0.55
RNF41-201ENST00000345093 SBNO1A3KN83 1393 aa11.6□□□□□ -0.55
RNF41-201ENST00000345093 QTRT2Q9H974 415 aaKnown RBP11.6□□□□□ -0.55
RNF41-201ENST00000345093 SEC63Q9UGP8 760 aaKnown RBP11.6□□□□□ -0.55
RNF41-201ENST00000345093 TMEM94Q12767 1356 aa11.6□□□□□ -0.55
RNF41-201ENST00000345093 CCDC196A0A1B0GTZ2 297 aa11.6□□□□□ -0.55
RNF41-201ENST00000345093 DESP17661 470 aa11.6□□□□□ -0.55
RNF41-201ENST00000345093 HSP90AA2PQ14568 343 aaPredicted RBP11.6□□□□□ -0.55
RNF41-201ENST00000345093 IMMTQ16891 758 aaKnown RBP11.6□□□□□ -0.55
RNF41-201ENST00000345093 MTERF4Q7Z6M4 381 aaKnown RBP11.6□□□□□ -0.55
RNF41-201ENST00000345093 AACSQ86V21 672 aa11.6□□□□□ -0.55
RNF41-201ENST00000345093 USHBP1Q8N6Y0 703 aa11.6□□□□□ -0.55
RNF41-201ENST00000345093 EMILIN1Q9Y6C2 1016 aa11.6□□□□□ -0.55
RNF41-201ENST00000345093 H0YIN7 160 aa11.6□□□□□ -0.55
RNF41-201ENST00000345093 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.6□□□□□ -0.55
RNF41-201ENST00000345093 CCDC184Q52MB2 194 aa11.6□□□□□ -0.55
RNF41-201ENST00000345093 ZNF444Q8N0Y2 327 aaPredicted RBP11.6□□□□□ -0.55
RNF41-201ENST00000345093 RTN4Q9NQC3 1192 aaKnown RBP11.6□□□□□ -0.55
RNF41-201ENST00000345093 ALDH1L1O75891 902 aa11.59□□□□□ -0.55
RNF41-201ENST00000345093 ALDH1B1P30837 517 aa11.59□□□□□ -0.55
RNF41-201ENST00000345093 CDCA7LQ96GN5 454 aa11.59□□□□□ -0.55
RNF41-201ENST00000345093 RNF123Q5XPI4 1314 aa11.59□□□□□ -0.55
RNF41-201ENST00000345093 ACSBG1Q96GR2 724 aa11.59□□□□□ -0.55
RNF41-201ENST00000345093 MKNK2Q9HBH9 465 aa11.59□□□□□ -0.55
RNF41-201ENST00000345093 PLXNC1O60486 1568 aa11.59□□□□□ -0.55
RNF41-201ENST00000345093 NOB1Q9ULX3 412 aaKnown RBP11.59□□□□□ -0.55
RNF41-201ENST00000345093 ZNF76P36508 570 aa11.59□□□□□ -0.55
RNF41-201ENST00000345093 ZC3H12CQ9C0D7 883 aaKnown RBP11.59□□□□□ -0.55
RNF41-201ENST00000345093 A2ML1A8K2U0 1454 aa11.58□□□□□ -0.55
RNF41-201ENST00000345093 DPY19L2Q6NUT2 758 aa11.58□□□□□ -0.56
RNF41-201ENST00000345093 DZIP3Q86Y13 1208 aaKnown RBP11.58□□□□□ -0.56
RNF41-201ENST00000345093 CERKQ8TCT0 537 aa11.58□□□□□ -0.56
RNF41-201ENST00000345093 ZNF396Q96N95 335 aaPredicted RBP11.58□□□□□ -0.56
RNF41-201ENST00000345093 FKBP4Q02790 459 aaKnown RBP eCLIP11.58□□□□□ -0.56
RNF41-201ENST00000345093 CCDC12Q8WUD4 166 aaPredicted RBP11.58□□□□□ -0.56
RNF41-201ENST00000345093 FEZ1Q99689 392 aa11.58□□□□□ -0.56
RNF41-201ENST00000345093 BMP2KQ9NSY1 1161 aaPredicted RBP11.58□□□□□ -0.56
RNF41-201ENST00000345093 RRP12Q5JTH9 1297 aaKnown RBP11.58□□□□□ -0.56
RNF41-201ENST00000345093 MAP7D2Q96T17 732 aa11.58□□□□□ -0.56
RNF41-201ENST00000345093 SH2D4AQ9H788 454 aa11.58□□□□□ -0.56
RNF41-201ENST00000345093 CNBD1Q8NA66 436 aa11.58□□□□□ -0.56
RNF41-201ENST00000345093 DDX49Q9Y6V7 483 aaKnown RBP11.58□□□□□ -0.56
RNF41-201ENST00000345093 MAP3K5Q99683 1374 aa11.58□□□□□ -0.56
RNF41-201ENST00000345093 MBD3O95983 291 aa11.57□□□□□ -0.56
RNF41-201ENST00000345093 CCDC73Q6ZRK6 1079 aa11.57□□□□□ -0.56
RNF41-201ENST00000345093 NIP7Q9Y221 180 aaKnown RBP eCLIP11.57□□□□□ -0.56
RNF41-201ENST00000345093 POLR3AO14802 1390 aaPredicted RBP11.57□□□□□ -0.56
RNF41-201ENST00000345093 PLEKHH1Q9ULM0 1364 aa11.57□□□□□ -0.56
RNF41-201ENST00000345093 GOLGA6L19H0YKK7 550 aa11.57□□□□□ -0.56
RNF41-201ENST00000345093 GLRX3O76003 335 aaKnown RBP11.57□□□□□ -0.56
RNF41-201ENST00000345093 EPS15P42566 896 aa11.57□□□□□ -0.56
RNF41-201ENST00000345093 DHX37Q8IY37 1157 aaKnown RBP11.57□□□□□ -0.56
RNF41-201ENST00000345093 SPRYD3Q8NCJ5 442 aa11.57□□□□□ -0.56
RNF41-201ENST00000345093 ADCY10Q96PN6 1610 aa11.57□□□□□ -0.56
RNF41-201ENST00000345093 KRT18P05783 430 aaKnown RBP11.57□□□□□ -0.56
RNF41-201ENST00000345093 ABCF2Q9UG63 623 aa11.57□□□□□ -0.56
RNF41-201ENST00000345093 PLEKHG3A1L390 1219 aa11.57□□□□□ -0.56
RNF41-201ENST00000345093 ANKRD13DQ6ZTN6 518 aa11.57□□□□□ -0.56
RNF41-201ENST00000345093 CRNKL1Q9BZJ0 848 aaKnown RBP11.57□□□□□ -0.56
RNF41-201ENST00000345093 GNPATO15228 680 aa11.57□□□□□ -0.56
RNF41-201ENST00000345093 BLMP54132 1417 aaPredicted RBP11.56□□□□□ -0.56
RNF41-201ENST00000345093 ERVV-2B6SEH9 535 aa11.56□□□□□ -0.56
RNF41-201ENST00000345093 PES1O00541 588 aaKnown RBP11.56□□□□□ -0.56
RNF41-201ENST00000345093 PDE4BQ07343 736 aa11.56□□□□□ -0.56
RNF41-201ENST00000345093 IQCA1Q86XH1 822 aa11.56□□□□□ -0.56
RNF41-201ENST00000345093 SAMD9LQ8IVG5 1584 aa11.56□□□□□ -0.56
RNF41-201ENST00000345093 IDH1O75874 414 aaKnown RBP11.56□□□□□ -0.56
RNF41-201ENST00000345093 TMEM87AQ8NBN3 555 aa11.56□□□□□ -0.56
RNF41-201ENST00000345093 U3KPZ7 1027 aaPredicted RBP11.56□□□□□ -0.56
RNF41-201ENST00000345093 HMGB1P09429 215 aaKnown RBP11.56□□□□□ -0.56
RNF41-201ENST00000345093 SLC4A3P48751 1232 aa11.56□□□□□ -0.56
RNF41-201ENST00000345093 GPR162Q16538 588 aa11.56□□□□□ -0.56
RNF41-201ENST00000345093 CCDC70Q6NSX1 233 aa11.56□□□□□ -0.56
RNF41-201ENST00000345093 PANK1Q8TE04 598 aa11.56□□□□□ -0.56
RNF41-201ENST00000345093 HOXC9P31274 260 aa11.55□□□□□ -0.56
RNF41-201ENST00000345093 SPATA31E1Q6ZUB1 1445 aa11.55□□□□□ -0.56
RNF41-201ENST00000345093 BECN2A8MW95 431 aa11.55□□□□□ -0.56
RNF41-201ENST00000345093 HOXB7P09629 217 aa11.55□□□□□ -0.56
RNF41-201ENST00000345093 MCM10Q7L590 875 aa11.55□□□□□ -0.56
RNF41-201ENST00000345093 SIL1Q9H173 461 aa11.55□□□□□ -0.56
RNF41-201ENST00000345093 DHX8Q14562 1220 aaKnown RBP11.55□□□□□ -0.56
RNF41-201ENST00000345093 FAM98CQ17RN3 349 aaKnown RBP11.55□□□□□ -0.56
RNF41-201ENST00000345093 LDHAL6AQ6ZMR3 332 aa11.55□□□□□ -0.56
RNF41-201ENST00000345093 NOL8Q76FK4 1167 aaKnown RBP11.55□□□□□ -0.56
RNF41-201ENST00000345093 TSPOAP1O95153 1857 aa11.55□□□□□ -0.56
RNF41-201ENST00000345093 CCDC173Q0VFZ6 552 aa11.55□□□□□ -0.56
RNF41-201ENST00000345093 CREBRFQ8IUR6 639 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms