RNA–Protein interactions for RNA: ENST00000344680.8

RTN2-202, Transcript of reticulon 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN2, Length 2,063 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-202ENST00000344680 DNAAF4Q8WXU2 420 aa31.2■■■□□ 2.59
RTN2-202ENST00000344680 SRCIN1Q9C0H9 1055 aa31.2■■■□□ 2.59
RTN2-202ENST00000344680 UPF2Q9HAU5 1272 aaKnown RBP31.2■■■□□ 2.59
RTN2-202ENST00000344680 PARP4Q9UKK3 1724 aaKnown RBP31.19■■■□□ 2.58
RTN2-202ENST00000344680 PI4KAP2A4QPH2 592 aa31.18■■■□□ 2.58
RTN2-202ENST00000344680 PI4KAP1Q8N8J0 262 aa31.18■■■□□ 2.58
RTN2-202ENST00000344680 ZCRB1Q8TBF4 217 aaKnown RBP31.18■■■□□ 2.58
RTN2-202ENST00000344680 HYPKQ9NX55 129 aa31.18■■■□□ 2.58
RTN2-202ENST00000344680 PRAMEF22A3QJZ6 481 aa31.18■■■□□ 2.58
RTN2-202ENST00000344680 SLC39A6Q13433 755 aa31.18■■■□□ 2.58
RTN2-202ENST00000344680 ATP8B2P98198 1209 aa31.17■■■□□ 2.58
RTN2-202ENST00000344680 BEND3Q5T5X7 828 aa31.17■■■□□ 2.58
RTN2-202ENST00000344680 ADCY9O60503 1353 aa31.17■■■□□ 2.58
RTN2-202ENST00000344680 PCDH11XQ9BZA7 1347 aa31.17■■■□□ 2.58
RTN2-202ENST00000344680 PCDH11YQ9BZA8 1340 aa31.17■■■□□ 2.58
RTN2-202ENST00000344680 ANXA1P04083 346 aa31.17■■■□□ 2.58
RTN2-202ENST00000344680 DDX21Q9NR30 783 aaKnown RBP eCLIP31.16■■■□□ 2.58
RTN2-202ENST00000344680 COL22A1Q8NFW1 1626 aaPredicted RBP31.15■■■□□ 2.58
RTN2-202ENST00000344680 UBTFL1P0CB47 393 aaPredicted RBP31.15■■■□□ 2.58
RTN2-202ENST00000344680 IL2RBP14784 551 aa31.15■■■□□ 2.58
RTN2-202ENST00000344680 PLEKHM2Q8IWE5 1019 aa31.15■■■□□ 2.58
RTN2-202ENST00000344680 PROSER3Q2NL68 480 aa31.14■■■□□ 2.58
RTN2-202ENST00000344680 TBC1D32Q96NH3 1257 aa31.14■■■□□ 2.58
RTN2-202ENST00000344680 CABP4P57796 275 aa31.13■■■□□ 2.57
RTN2-202ENST00000344680 EVA1CP58658 441 aa31.13■■■□□ 2.57
RTN2-202ENST00000344680 LARP1Q6PKG0 1096 aaKnown RBP31.13■■■□□ 2.57
RTN2-202ENST00000344680 LRRFIP2Q9Y608 721 aaKnown RBP31.13■■■□□ 2.57
RTN2-202ENST00000344680 PDIA6Q15084 440 aa31.12■■■□□ 2.57
RTN2-202ENST00000344680 KSR2Q6VAB6 950 aa31.12■■■□□ 2.57
RTN2-202ENST00000344680 ZNF496Q96IT1 587 aaPredicted RBP31.12■■■□□ 2.57
RTN2-202ENST00000344680 NKX1-1Q15270 411 aaPredicted RBP31.12■■■□□ 2.57
RTN2-202ENST00000344680 TTC5Q8N0Z6 440 aa31.12■■■□□ 2.57
RTN2-202ENST00000344680 BECN1Q14457 450 aa31.11■■■□□ 2.57
RTN2-202ENST00000344680 STRN4Q9NRL3 753 aa31.11■■■□□ 2.57
RTN2-202ENST00000344680 SNRPA1P09661 255 aaKnown RBP31.09■■■□□ 2.57
RTN2-202ENST00000344680 FMNL2Q96PY5 1086 aa31.09■■■□□ 2.57
RTN2-202ENST00000344680 PNMA6EA0A0J9YXQ4 647 aa31.09■■■□□ 2.57
RTN2-202ENST00000344680 ERVV-2B6SEH9 535 aa31.09■■■□□ 2.57
RTN2-202ENST00000344680 ALDH1L1O75891 902 aa31.09■■■□□ 2.57
RTN2-202ENST00000344680 MAP3K2Q9Y2U5 619 aa31.09■■■□□ 2.57
RTN2-202ENST00000344680 C16orf71Q8IYS4 520 aaPredicted RBP31.08■■■□□ 2.57
RTN2-202ENST00000344680 DDX58O95786 925 aaKnown RBP31.07■■■□□ 2.56
RTN2-202ENST00000344680 C5P01031 1676 aa31.06■■■□□ 2.56
RTN2-202ENST00000344680 SSH3Q8TE77 659 aa31.05■■■□□ 2.56
RTN2-202ENST00000344680 SMARCA5O60264 1052 aaPredicted RBP31.05■■■□□ 2.56
RTN2-202ENST00000344680 NBPF7P0C2Y1 421 aaPredicted RBP31.04■■■□□ 2.56
RTN2-202ENST00000344680 TTC22Q5TAA0 569 aa31.04■■■□□ 2.56
RTN2-202ENST00000344680 RRP9O43818 475 aaKnown RBP31.03■■■□□ 2.56
RTN2-202ENST00000344680 GSPT1P15170 499 aaKnown RBP31.03■■■□□ 2.56
RTN2-202ENST00000344680 MFAP1P55081 439 aaKnown RBP31.03■■■□□ 2.56
RTN2-202ENST00000344680 APBB1O00213 710 aa31.02■■■□□ 2.56
RTN2-202ENST00000344680 RRAGDQ9NQL2 400 aaPredicted RBP31.02■■■□□ 2.56
RTN2-202ENST00000344680 BTG4Q9NY30 223 aa31.02■■■□□ 2.56
RTN2-202ENST00000344680 IBTKQ9P2D0 1353 aaPredicted RBP31.02■■■□□ 2.56
RTN2-202ENST00000344680 POLA2Q14181 598 aa31.02■■■□□ 2.56
RTN2-202ENST00000344680 OTUD7AQ8TE49 926 aaPredicted RBP31.02■■■□□ 2.56
RTN2-202ENST00000344680 C22orf23Q9BZE7 217 aa31.02■■■□□ 2.56
RTN2-202ENST00000344680 EXOC6BQ9Y2D4 811 aa31.02■■■□□ 2.56
RTN2-202ENST00000344680 LINS1Q8NG48 757 aa31.01■■■□□ 2.56
RTN2-202ENST00000344680 USP16Q9Y5T5 823 aa31.01■■■□□ 2.56
RTN2-202ENST00000344680 LRRCC1Q9C099 1032 aa31.01■■■□□ 2.55
RTN2-202ENST00000344680 OSBPL3Q9H4L5 887 aa31■■■□□ 2.55
RTN2-202ENST00000344680 HDAC5Q9UQL6 1122 aa31■■■□□ 2.55
RTN2-202ENST00000344680 COL14A1Q05707 1796 aaKnown RBP31■■■□□ 2.55
RTN2-202ENST00000344680 LRP10Q7Z4F1 713 aa30.99■■■□□ 2.55
RTN2-202ENST00000344680 PPP1R42Q7Z4L9 355 aa30.99■■■□□ 2.55
RTN2-202ENST00000344680 SHANK3Q9BYB0 1731 aa30.98■■■□□ 2.55
RTN2-202ENST00000344680 CDC45O75419 566 aa30.98■■■□□ 2.55
RTN2-202ENST00000344680 TBC1D9Q6ZT07 1266 aa30.98■■■□□ 2.55
RTN2-202ENST00000344680 DDX54Q8TDD1 881 aaKnown RBP30.98■■■□□ 2.55
RTN2-202ENST00000344680 NUTM2BA6NNL0 878 aaPredicted RBP30.97■■■□□ 2.55
RTN2-202ENST00000344680 NUTM2EB1AL46 878 aaPredicted RBP30.97■■■□□ 2.55
RTN2-202ENST00000344680 CLCN1P35523 988 aa30.97■■■□□ 2.55
RTN2-202ENST00000344680 AIMP1Q12904 312 aaKnown RBP30.97■■■□□ 2.55
RTN2-202ENST00000344680 NUTM2AQ8IVF1 878 aaPredicted RBP30.97■■■□□ 2.55
RTN2-202ENST00000344680 GLI3P10071 1580 aa30.97■■■□□ 2.55
RTN2-202ENST00000344680 ADAMTS2O95450 1211 aa30.96■■■□□ 2.55
RTN2-202ENST00000344680 HSPA1LP34931 641 aa30.96■■■□□ 2.55
RTN2-202ENST00000344680 MTX1Q13505 466 aa30.96■■■□□ 2.55
RTN2-202ENST00000344680 C9orf78Q9NZ63 289 aaPredicted RBP30.96■■■□□ 2.55
RTN2-202ENST00000344680 UTYO14607 1347 aa30.96■■■□□ 2.55
RTN2-202ENST00000344680 RAB11FIP3O75154 756 aa30.96■■■□□ 2.55
RTN2-202ENST00000344680 MYL6BP14649 208 aa30.96■■■□□ 2.55
RTN2-202ENST00000344680 XAGE3Q8WTP9 111 aa30.96■■■□□ 2.55
RTN2-202ENST00000344680 COPS6Q7L5N1 327 aa30.95■■■□□ 2.55
RTN2-202ENST00000344680 RIC3Q7Z5B4 369 aa30.95■■■□□ 2.55
RTN2-202ENST00000344680 JCADQ9P266 1359 aa30.95■■■□□ 2.55
RTN2-202ENST00000344680 SALL3Q9BXA9 1300 aa30.95■■■□□ 2.54
RTN2-202ENST00000344680 ERBB4Q15303 1308 aa30.94■■■□□ 2.54
RTN2-202ENST00000344680 PDE1AP54750 535 aa30.94■■■□□ 2.54
RTN2-202ENST00000344680 CWF19L2Q2TBE0 894 aaKnown RBP30.94■■■□□ 2.54
RTN2-202ENST00000344680 SRGAP3O43295 1099 aa30.93■■■□□ 2.54
RTN2-202ENST00000344680 RBM25P49756 843 aaKnown RBP30.93■■■□□ 2.54
RTN2-202ENST00000344680 HSP90AA1P07900 732 aaKnown RBP30.91■■■□□ 2.54
RTN2-202ENST00000344680 METTL22Q9BUU2 404 aaPredicted RBP30.91■■■□□ 2.54
RTN2-202ENST00000344680 DISP2A7MBM2 1401 aa30.91■■■□□ 2.54
RTN2-202ENST00000344680 PAPPAQ13219 1627 aa30.91■■■□□ 2.54
RTN2-202ENST00000344680 GRM8O00222 908 aa30.91■■■□□ 2.54
RTN2-202ENST00000344680 NEXNQ0ZGT2 675 aa30.91■■■□□ 2.54
RTN2-202ENST00000344680 ANKRD13DQ6ZTN6 518 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms