RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 CCDC152Q4G0S7 254 aa19.59■□□□□ 0.73
SMARCA4-201ENST00000344626 MBIPQ9NS73 344 aa19.59■□□□□ 0.73
SMARCA4-201ENST00000344626 PIK3R4Q99570 1358 aa19.59■□□□□ 0.73
SMARCA4-201ENST00000344626 NSFL1CQ9UNZ2 370 aaKnown RBP19.58■□□□□ 0.73
SMARCA4-201ENST00000344626 USP5P45974 858 aa19.58■□□□□ 0.73
SMARCA4-201ENST00000344626 NUCB2P80303 420 aa19.58■□□□□ 0.73
SMARCA4-201ENST00000344626 MPHOSPH10O00566 681 aaKnown RBP19.58■□□□□ 0.72
SMARCA4-201ENST00000344626 CARD14Q9BXL6 1004 aa19.58■□□□□ 0.72
SMARCA4-201ENST00000344626 RIMBP3CA6NJZ7 1639 aa19.57■□□□□ 0.72
SMARCA4-201ENST00000344626 RIMBP3BA6NNM3 1639 aa19.57■□□□□ 0.72
SMARCA4-201ENST00000344626 RIMBP3Q9UFD9 1639 aa19.57■□□□□ 0.72
SMARCA4-201ENST00000344626 ANKRD18AQ8IVF6 992 aa19.57■□□□□ 0.72
SMARCA4-201ENST00000344626 TTC37Q6PGP7 1564 aa19.57■□□□□ 0.72
SMARCA4-201ENST00000344626 KRT27Q7Z3Y8 459 aa19.57■□□□□ 0.72
SMARCA4-201ENST00000344626 OGFOD1Q8N543 542 aa19.57■□□□□ 0.72
SMARCA4-201ENST00000344626 POLR3DP05423 398 aaPredicted RBP19.56■□□□□ 0.72
SMARCA4-201ENST00000344626 PES1O00541 588 aaKnown RBP19.56■□□□□ 0.72
SMARCA4-201ENST00000344626 RBM26Q5T8P6 1007 aaKnown RBP19.56■□□□□ 0.72
SMARCA4-201ENST00000344626 AIDAQ96BJ3 306 aa19.56■□□□□ 0.72
SMARCA4-201ENST00000344626 ZC3H12CQ9C0D7 883 aaKnown RBP19.56■□□□□ 0.72
SMARCA4-201ENST00000344626 NLRP1Q9C000 1473 aa19.56■□□□□ 0.72
SMARCA4-201ENST00000344626 SLF2Q8IX21 1173 aa19.55■□□□□ 0.72
SMARCA4-201ENST00000344626 NYXQ9GZU5 481 aa19.55■□□□□ 0.72
SMARCA4-201ENST00000344626 DDX49Q9Y6V7 483 aaKnown RBP19.55■□□□□ 0.72
SMARCA4-201ENST00000344626 BRINP3Q76B58 766 aa19.55■□□□□ 0.72
SMARCA4-201ENST00000344626 UTP14AQ9BVJ6 771 aaKnown RBP19.55■□□□□ 0.72
SMARCA4-201ENST00000344626 ZNF287Q9HBT7 754 aa19.55■□□□□ 0.72
SMARCA4-201ENST00000344626 MSL1Q68DK7 614 aa19.55■□□□□ 0.72
SMARCA4-201ENST00000344626 ADGBQ8N7X0 1667 aa19.55■□□□□ 0.72
SMARCA4-201ENST00000344626 GOLGA6L3A6NEY3 463 aa19.55■□□□□ 0.72
SMARCA4-201ENST00000344626 ANKRD1Q15327 319 aa19.55■□□□□ 0.72
SMARCA4-201ENST00000344626 RNMTO43148 476 aaKnown RBP19.54■□□□□ 0.72
SMARCA4-201ENST00000344626 CNBD1Q8NA66 436 aa19.54■□□□□ 0.72
SMARCA4-201ENST00000344626 TSR1Q2NL82 804 aaKnown RBP19.54■□□□□ 0.72
SMARCA4-201ENST00000344626 KDM5DQ9BY66 1539 aa19.54■□□□□ 0.72
SMARCA4-201ENST00000344626 GOLGA6L19H0YKK7 550 aa19.54■□□□□ 0.72
SMARCA4-201ENST00000344626 BICD2Q8TD16 824 aa19.54■□□□□ 0.72
SMARCA4-201ENST00000344626 TSHZ2Q9NRE2 1034 aa19.54■□□□□ 0.72
SMARCA4-201ENST00000344626 LRRFIP2Q9Y608 721 aaKnown RBP19.54■□□□□ 0.72
SMARCA4-201ENST00000344626 BECN2A8MW95 431 aa19.54■□□□□ 0.72
SMARCA4-201ENST00000344626 CHMP5Q9NZZ3 219 aa19.54■□□□□ 0.72
SMARCA4-201ENST00000344626 SAMD9LQ8IVG5 1584 aa19.53■□□□□ 0.72
SMARCA4-201ENST00000344626 KIAA0232Q92628 1395 aa19.53■□□□□ 0.72
SMARCA4-201ENST00000344626 EDC4Q6P2E9 1401 aaKnown RBP19.53■□□□□ 0.72
SMARCA4-201ENST00000344626 F8W031 263 aaPredicted RBP19.53■□□□□ 0.72
SMARCA4-201ENST00000344626 MYO1BO43795 1136 aa19.53■□□□□ 0.72
SMARCA4-201ENST00000344626 FAM196AQ6ZSG2 479 aa19.53■□□□□ 0.72
SMARCA4-201ENST00000344626 NUTM1Q86Y26 1132 aa19.53■□□□□ 0.72
SMARCA4-201ENST00000344626 CEP89Q96ST8 783 aa19.53■□□□□ 0.72
SMARCA4-201ENST00000344626 ANKRD20A12PQ8NF67 263 aa19.53■□□□□ 0.72
SMARCA4-201ENST00000344626 PIK3C2GO75747 1445 aa19.53■□□□□ 0.72
SMARCA4-201ENST00000344626 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.52■□□□□ 0.72
SMARCA4-201ENST00000344626 GLRX3O76003 335 aaKnown RBP19.52■□□□□ 0.72
SMARCA4-201ENST00000344626 CYP46A1Q9Y6A2 500 aa19.52■□□□□ 0.72
SMARCA4-201ENST00000344626 RABEP1Q15276 862 aa19.52■□□□□ 0.72
SMARCA4-201ENST00000344626 SEPT12Q8IYM1 358 aa19.52■□□□□ 0.72
SMARCA4-201ENST00000344626 POLR3AO14802 1390 aaPredicted RBP19.52■□□□□ 0.72
SMARCA4-201ENST00000344626 PDCP20941 246 aa19.52■□□□□ 0.72
SMARCA4-201ENST00000344626 IQSEC3Q9UPP2 1182 aaPredicted RBP19.52■□□□□ 0.72
SMARCA4-201ENST00000344626 CCDC69A6NI79 296 aa19.52■□□□□ 0.71
SMARCA4-201ENST00000344626 COL17A1Q9UMD9 1497 aaPredicted RBP19.52■□□□□ 0.71
SMARCA4-201ENST00000344626 TPM1P09493 284 aa19.52■□□□□ 0.71
SMARCA4-201ENST00000344626 ATP2B1P20020 1258 aa19.52■□□□□ 0.71
SMARCA4-201ENST00000344626 CCDC8Q9H0W5 538 aaPredicted RBP19.51■□□□□ 0.71
SMARCA4-201ENST00000344626 CCDC24Q8N4L8 307 aa19.51■□□□□ 0.71
SMARCA4-201ENST00000344626 MINDY4BA8MYZ0 360 aa19.51■□□□□ 0.71
SMARCA4-201ENST00000344626 TRIM22Q8IYM9 498 aa19.51■□□□□ 0.71
SMARCA4-201ENST00000344626 PHACTR3Q96KR7 559 aa19.51■□□□□ 0.71
SMARCA4-201ENST00000344626 AFF2P51816 1311 aa19.5■□□□□ 0.71
SMARCA4-201ENST00000344626 MYCNP04198 464 aaPredicted RBP19.5■□□□□ 0.71
SMARCA4-201ENST00000344626 BOLA2Q9H3K6 86 aa19.5■□□□□ 0.71
SMARCA4-201ENST00000344626 NEK4P51957 841 aa19.5■□□□□ 0.71
SMARCA4-201ENST00000344626 HECW2Q9P2P5 1572 aa19.5■□□□□ 0.71
SMARCA4-201ENST00000344626 MAP3K12Q12852 859 aa19.5■□□□□ 0.71
SMARCA4-201ENST00000344626 KRT32Q14532 448 aa19.5■□□□□ 0.71
SMARCA4-201ENST00000344626 CCDC73Q6ZRK6 1079 aa19.5■□□□□ 0.71
SMARCA4-201ENST00000344626 DNAJC10Q8IXB1 793 aa19.5■□□□□ 0.71
SMARCA4-201ENST00000344626 SNRKQ9NRH2 765 aa19.49■□□□□ 0.71
SMARCA4-201ENST00000344626 GJA3Q9Y6H8 435 aa19.49■□□□□ 0.71
SMARCA4-201ENST00000344626 CNKSR2Q8WXI2 1034 aa19.49■□□□□ 0.71
SMARCA4-201ENST00000344626 UBAC1Q9BSL1 405 aa19.49■□□□□ 0.71
SMARCA4-201ENST00000344626 RIMBP2O15034 1052 aa19.49■□□□□ 0.71
SMARCA4-201ENST00000344626 NUP133Q8WUM0 1156 aa19.49■□□□□ 0.71
SMARCA4-201ENST00000344626 MKNK2Q9HBH9 465 aa19.49■□□□□ 0.71
SMARCA4-201ENST00000344626 SBNO1A3KN83 1393 aa19.49■□□□□ 0.71
SMARCA4-201ENST00000344626 HSPA1LP34931 641 aa19.49■□□□□ 0.71
SMARCA4-201ENST00000344626 UNC5CLQ8IV45 518 aa19.49■□□□□ 0.71
SMARCA4-201ENST00000344626 ERVK-7P63135 1459 aa19.49■□□□□ 0.71
SMARCA4-201ENST00000344626 MAP3K5Q99683 1374 aa19.48■□□□□ 0.71
SMARCA4-201ENST00000344626 ZNF790Q6PG37 636 aa19.48■□□□□ 0.71
SMARCA4-201ENST00000344626 HDAC9Q9UKV0 1011 aa19.48■□□□□ 0.71
SMARCA4-201ENST00000344626 ROBO2Q9HCK4 1378 aa19.48■□□□□ 0.71
SMARCA4-201ENST00000344626 TPM3P06753 285 aa19.48■□□□□ 0.71
SMARCA4-201ENST00000344626 BCS1LQ9Y276 419 aa19.48■□□□□ 0.71
SMARCA4-201ENST00000344626 FEZ1Q99689 392 aa19.47■□□□□ 0.71
SMARCA4-201ENST00000344626 MX1P20591 662 aa19.47■□□□□ 0.71
SMARCA4-201ENST00000344626 LMOD1P29536 600 aaPredicted RBP19.47■□□□□ 0.71
SMARCA4-201ENST00000344626 IMMTQ16891 758 aaKnown RBP19.47■□□□□ 0.71
SMARCA4-201ENST00000344626 LDHCP07864 332 aa19.47■□□□□ 0.71
SMARCA4-201ENST00000344626 SOGA3Q5TF21 947 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms