RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 FMNL2Q96PY5 1086 aa17.03■□□□□ 0.32
CDC42-202ENST00000344548 DCTPP1Q9H773 170 aa17.03■□□□□ 0.32
CDC42-202ENST00000344548 MAP3K2Q9Y2U5 619 aa17.03■□□□□ 0.32
CDC42-202ENST00000344548 PTCD1O75127 700 aaKnown RBP17.03■□□□□ 0.32
CDC42-202ENST00000344548 NBPF7P0C2Y1 421 aaPredicted RBP17.03■□□□□ 0.32
CDC42-202ENST00000344548 RPAP2Q8IXW5 612 aaPredicted RBP17.03■□□□□ 0.32
CDC42-202ENST00000344548 SEC24BO95487 1268 aa17.02■□□□□ 0.32
CDC42-202ENST00000344548 GCC1Q96CN9 775 aa17.02■□□□□ 0.32
CDC42-202ENST00000344548 BCL11AQ9H165 835 aa17.02■□□□□ 0.32
CDC42-202ENST00000344548 PXDNLA1KZ92 1463 aa17.02■□□□□ 0.31
CDC42-202ENST00000344548 NRAPQ86VF7 1730 aa17.02■□□□□ 0.31
CDC42-202ENST00000344548 N4BP2Q86UW6 1770 aaPredicted RBP17.02■□□□□ 0.31
CDC42-202ENST00000344548 PNMA6EA0A0J9YXQ4 647 aa17.01■□□□□ 0.31
CDC42-202ENST00000344548 SRCIN1Q9C0H9 1055 aa17.01■□□□□ 0.31
CDC42-202ENST00000344548 HYPKQ9NX55 129 aa17.01■□□□□ 0.31
CDC42-202ENST00000344548 LRRFIP2Q9Y608 721 aaKnown RBP17.01■□□□□ 0.31
CDC42-202ENST00000344548 SPATA31A1Q5TZJ5 1347 aa17.01■□□□□ 0.31
CDC42-202ENST00000344548 GNAI2P04899 355 aa17.01■□□□□ 0.31
CDC42-202ENST00000344548 CWF19L2Q2TBE0 894 aaKnown RBP17.01■□□□□ 0.31
CDC42-202ENST00000344548 KSR2Q6VAB6 950 aa17.01■□□□□ 0.31
CDC42-202ENST00000344548 PIGBQ92521 554 aa17.01■□□□□ 0.31
CDC42-202ENST00000344548 KCPQ6ZWJ8 1503 aa17.01■□□□□ 0.31
CDC42-202ENST00000344548 MSH5O43196 834 aa17■□□□□ 0.31
CDC42-202ENST00000344548 NPM2Q86SE8 214 aaKnown RBP17■□□□□ 0.31
CDC42-202ENST00000344548 ASAP1Q9ULH1 1129 aa17■□□□□ 0.31
CDC42-202ENST00000344548 APBB1O00213 710 aa17■□□□□ 0.31
CDC42-202ENST00000344548 COPS6Q7L5N1 327 aa17■□□□□ 0.31
CDC42-202ENST00000344548 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
CDC42-202ENST00000344548 XAGE3Q8WTP9 111 aa17■□□□□ 0.31
CDC42-202ENST00000344548 NBPF26B4DH59 902 aa16.99■□□□□ 0.31
CDC42-202ENST00000344548 NBPF14Q5TI25 921 aa16.99■□□□□ 0.31
CDC42-202ENST00000344548 NBPF10Q6P3W6 841 aaKnown RBP16.99■□□□□ 0.31
CDC42-202ENST00000344548 NBPF15Q8N660 670 aa16.99■□□□□ 0.31
CDC42-202ENST00000344548 CHMP4AQ9BY43 222 aa16.99■□□□□ 0.31
CDC42-202ENST00000344548 UBR2Q8IWV8 1755 aa16.99■□□□□ 0.31
CDC42-202ENST00000344548 SMARCA5O60264 1052 aaPredicted RBP16.99■□□□□ 0.31
CDC42-202ENST00000344548 GNAI3P08754 354 aa16.99■□□□□ 0.31
CDC42-202ENST00000344548 SLIT2O94813 1529 aa16.99■□□□□ 0.31
CDC42-202ENST00000344548 PAPPAQ13219 1627 aa16.98■□□□□ 0.31
CDC42-202ENST00000344548 EXOC5O00471 708 aa16.98■□□□□ 0.31
CDC42-202ENST00000344548 KAT6BQ8WYB5 2073 aa16.98■□□□□ 0.31
CDC42-202ENST00000344548 A1BGP04217 495 aa16.98■□□□□ 0.31
CDC42-202ENST00000344548 UBTFL1P0CB47 393 aaPredicted RBP16.98■□□□□ 0.31
CDC42-202ENST00000344548 AEBP2Q6ZN18 517 aaPredicted RBP16.98■□□□□ 0.31
CDC42-202ENST00000344548 OTUD7AQ8TE49 926 aaPredicted RBP16.98■□□□□ 0.31
CDC42-202ENST00000344548 TMOD3Q9NYL9 352 aa16.98■□□□□ 0.31
CDC42-202ENST00000344548 TNS2Q63HR2 1409 aa16.97■□□□□ 0.31
CDC42-202ENST00000344548 SPATA31A5Q5VU36 1347 aa16.97■□□□□ 0.31
CDC42-202ENST00000344548 SPATA31A7Q8IWB4 1347 aa16.97■□□□□ 0.31
CDC42-202ENST00000344548 CERKQ8TCT0 537 aa16.97■□□□□ 0.31
CDC42-202ENST00000344548 ATG3Q9NT62 314 aa16.97■□□□□ 0.31
CDC42-202ENST00000344548 IGKV5-2P06315 115 aa16.96■□□□□ 0.31
CDC42-202ENST00000344548 C8orf37Q96NL8 207 aa16.96■□□□□ 0.31
CDC42-202ENST00000344548 ITGB4P16144 1822 aa16.96■□□□□ 0.31
CDC42-202ENST00000344548 WNK3Q9BYP7 1800 aa16.96■□□□□ 0.31
CDC42-202ENST00000344548 ATP8B2P98198 1209 aa16.96■□□□□ 0.31
CDC42-202ENST00000344548 EXOC6BQ9Y2D4 811 aa16.96■□□□□ 0.31
CDC42-202ENST00000344548 CCDC9Q9Y3X0 531 aaKnown RBP16.95■□□□□ 0.3
CDC42-202ENST00000344548 RIC3Q7Z5B4 369 aa16.95■□□□□ 0.3
CDC42-202ENST00000344548 SLC4A9Q96Q91 983 aa16.95■□□□□ 0.3
CDC42-202ENST00000344548 MARCH10Q8NA82 808 aaPredicted RBP16.94■□□□□ 0.3
CDC42-202ENST00000344548 SYTL4Q96C24 671 aaPredicted RBP16.94■□□□□ 0.3
CDC42-202ENST00000344548 BCL9LQ86UU0 1499 aa16.94■□□□□ 0.3
CDC42-202ENST00000344548 LRP6O75581 1613 aa16.93■□□□□ 0.3
CDC42-202ENST00000344548 LAMB4A4D0S4 1761 aa16.93■□□□□ 0.3
CDC42-202ENST00000344548 JCADQ9P266 1359 aa16.93■□□□□ 0.3
CDC42-202ENST00000344548 PRIM1P49642 420 aaKnown RBP16.93■□□□□ 0.3
CDC42-202ENST00000344548 TTLL7Q6ZT98 887 aa16.93■□□□□ 0.3
CDC42-202ENST00000344548 ANKRD13DQ6ZTN6 518 aa16.93■□□□□ 0.3
CDC42-202ENST00000344548 PPP1R42Q7Z4L9 355 aa16.93■□□□□ 0.3
CDC42-202ENST00000344548 KAZALD1Q96I82 304 aa16.93■□□□□ 0.3
CDC42-202ENST00000344548 NGLY1Q96IV0 654 aa16.93■□□□□ 0.3
CDC42-202ENST00000344548 BCL9O00512 1426 aa16.93■□□□□ 0.3
CDC42-202ENST00000344548 DDB1Q16531 1140 aa16.93■□□□□ 0.3
CDC42-202ENST00000344548 PLEKHM2Q8IWE5 1019 aa16.93■□□□□ 0.3
CDC42-202ENST00000344548 LINS1Q8NG48 757 aa16.93■□□□□ 0.3
CDC42-202ENST00000344548 UNC5CLQ8IV45 518 aa16.92■□□□□ 0.3
CDC42-202ENST00000344548 DNAJC10Q8IXB1 793 aa16.92■□□□□ 0.3
CDC42-202ENST00000344548 JARID2Q92833 1246 aaPredicted RBP16.92■□□□□ 0.3
CDC42-202ENST00000344548 MYD88Q99836 296 aa16.92■□□□□ 0.3
CDC42-202ENST00000344548 NWD2Q9ULI1 1742 aa16.92■□□□□ 0.3
CDC42-202ENST00000344548 DDX58O95786 925 aaKnown RBP16.91■□□□□ 0.3
CDC42-202ENST00000344548 ACSBG1Q96GR2 724 aa16.91■□□□□ 0.3
CDC42-202ENST00000344548 THRAP3Q9Y2W1 955 aaKnown RBP16.91■□□□□ 0.3
CDC42-202ENST00000344548 HMMRO75330 724 aa16.91■□□□□ 0.3
CDC42-202ENST00000344548 ALDH1L1O75891 902 aa16.91■□□□□ 0.3
CDC42-202ENST00000344548 RBM42Q9BTD8 480 aaKnown RBP16.91■□□□□ 0.3
CDC42-202ENST00000344548 METTL22Q9BUU2 404 aaPredicted RBP16.91■□□□□ 0.3
CDC42-202ENST00000344548 C9orf78Q9NZ63 289 aaPredicted RBP16.91■□□□□ 0.3
CDC42-202ENST00000344548 NEURL1BA8MQ27 555 aa16.9■□□□□ 0.3
CDC42-202ENST00000344548 HSPA1LP34931 641 aa16.9■□□□□ 0.3
CDC42-202ENST00000344548 FAM98CQ17RN3 349 aaKnown RBP16.9■□□□□ 0.3
CDC42-202ENST00000344548 SSH3Q8TE77 659 aa16.9■□□□□ 0.3
CDC42-202ENST00000344548 ATP5J2-PTCD1G3V325 749 aa16.9■□□□□ 0.3
CDC42-202ENST00000344548 GSPT1P15170 499 aaKnown RBP16.9■□□□□ 0.3
CDC42-202ENST00000344548 SUCLG2Q96I99 432 aa16.9■□□□□ 0.3
CDC42-202ENST00000344548 GRM8O00222 908 aa16.89■□□□□ 0.29
CDC42-202ENST00000344548 POLA2Q14181 598 aa16.89■□□□□ 0.29
CDC42-202ENST00000344548 DOT1LQ8TEK3 1739 aa16.89■□□□□ 0.29
CDC42-202ENST00000344548 SRGAP3O43295 1099 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms