RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 PAFAH1B1P43034 410 aa15.74■□□□□ 0.11
TRIO-202ENST00000344204 KRT32Q14532 448 aa15.74■□□□□ 0.11
TRIO-202ENST00000344204 POLR1AO95602 1720 aaPredicted RBP15.74■□□□□ 0.11
TRIO-202ENST00000344204 C17orf53Q8N3J3 647 aaPredicted RBP15.74■□□□□ 0.11
TRIO-202ENST00000344204 ATAD2Q6PL18 1390 aa15.74■□□□□ 0.11
TRIO-202ENST00000344204 BUB1BO60566 1050 aaPredicted RBP15.74■□□□□ 0.11
TRIO-202ENST00000344204 CCT4P50991 539 aaKnown RBP15.74■□□□□ 0.11
TRIO-202ENST00000344204 CNPY2Q9Y2B0 182 aa15.74■□□□□ 0.11
TRIO-202ENST00000344204 CTAGE15A4D2H0 777 aa15.74■□□□□ 0.11
TRIO-202ENST00000344204 CTAGE8P0CG41 777 aa15.74■□□□□ 0.11
TRIO-202ENST00000344204 ARID4AP29374 1257 aaPredicted RBP15.74■□□□□ 0.11
TRIO-202ENST00000344204 CTAGE6Q86UF2 777 aa15.74■□□□□ 0.11
TRIO-202ENST00000344204 CTAGE4Q8IX94 777 aa15.74■□□□□ 0.11
TRIO-202ENST00000344204 ANKRD12Q6UB98 2062 aa15.73■□□□□ 0.11
TRIO-202ENST00000344204 KDM4AO75164 1064 aa15.73■□□□□ 0.11
TRIO-202ENST00000344204 FSIP1Q8NA03 581 aa15.73■□□□□ 0.11
TRIO-202ENST00000344204 GOLGA5Q8TBA6 731 aa15.73■□□□□ 0.11
TRIO-202ENST00000344204 CNPY4Q8N129 248 aa15.73■□□□□ 0.11
TRIO-202ENST00000344204 PPP1R9BQ96SB3 815 aa15.73■□□□□ 0.11
TRIO-202ENST00000344204 NUP88Q99567 741 aaPredicted RBP15.73■□□□□ 0.11
TRIO-202ENST00000344204 TRAK1Q9UPV9 953 aa15.73■□□□□ 0.11
TRIO-202ENST00000344204 KIAA1107Q9UPP5 1409 aa15.73■□□□□ 0.11
TRIO-202ENST00000344204 CDKL5O76039 1030 aa15.73■□□□□ 0.11
TRIO-202ENST00000344204 GCKP35557 465 aa15.73■□□□□ 0.11
TRIO-202ENST00000344204 RARSP54136 660 aaKnown RBP15.73■□□□□ 0.11
TRIO-202ENST00000344204 ARHGAP25P42331 645 aa15.73■□□□□ 0.11
TRIO-202ENST00000344204 COG3Q96JB2 828 aa15.73■□□□□ 0.11
TRIO-202ENST00000344204 SURF6O75683 361 aaKnown RBP15.72■□□□□ 0.11
TRIO-202ENST00000344204 PCF11O94913 1555 aaKnown RBP15.72■□□□□ 0.11
TRIO-202ENST00000344204 OAS2P29728 719 aaKnown RBP15.72■□□□□ 0.11
TRIO-202ENST00000344204 CCDC141Q6ZP82 1450 aa15.72■□□□□ 0.11
TRIO-202ENST00000344204 FBXO3Q9UK99 471 aa15.72■□□□□ 0.11
TRIO-202ENST00000344204 CCDC69A6NI79 296 aa15.72■□□□□ 0.11
TRIO-202ENST00000344204 SART3Q15020 963 aaKnown RBP15.72■□□□□ 0.11
TRIO-202ENST00000344204 RNF168Q8IYW5 571 aaPredicted RBP15.72■□□□□ 0.11
TRIO-202ENST00000344204 ANKRD62A6NC57 917 aa15.71■□□□□ 0.11
TRIO-202ENST00000344204 PPP2R3AQ06190 1150 aa15.71■□□□□ 0.11
TRIO-202ENST00000344204 CCDC172P0C7W6 258 aa15.71■□□□□ 0.11
TRIO-202ENST00000344204 PHACTR2O75167 634 aa15.71■□□□□ 0.11
TRIO-202ENST00000344204 HLTFQ14527 1009 aaKnown RBP eCLIP15.71■□□□□ 0.114e-8■□□□□ 8.5
TRIO-202ENST00000344204 YEATS4O95619 227 aa15.71■□□□□ 0.11
TRIO-202ENST00000344204 ATP2B1P20020 1258 aa15.71■□□□□ 0.11
TRIO-202ENST00000344204 SYT1P21579 422 aa15.71■□□□□ 0.11
TRIO-202ENST00000344204 IGHDP01880 384 aa15.71■□□□□ 0.1
TRIO-202ENST00000344204 CFTRP13569 1480 aa15.71■□□□□ 0.1
TRIO-202ENST00000344204 TSPYL4Q9UJ04 414 aa15.7■□□□□ 0.1
TRIO-202ENST00000344204 CCDC6Q16204 474 aa15.7■□□□□ 0.1
TRIO-202ENST00000344204 CARMIL2Q6F5E8 1435 aa15.7■□□□□ 0.1
TRIO-202ENST00000344204 NECTIN2Q92692 538 aa15.7■□□□□ 0.1
TRIO-202ENST00000344204 ZSCAN22P10073 491 aaPredicted RBP15.7■□□□□ 0.1
TRIO-202ENST00000344204 ZMYM4Q5VZL5 1548 aa15.7■□□□□ 0.1
TRIO-202ENST00000344204 NCAPD3P42695 1498 aa15.7■□□□□ 0.1
TRIO-202ENST00000344204 DUSP27Q5VZP5 1158 aa15.7■□□□□ 0.1
TRIO-202ENST00000344204 ICE2Q659A1 982 aa15.7■□□□□ 0.1
TRIO-202ENST00000344204 A6NNZ2 444 aa15.69■□□□□ 0.1
TRIO-202ENST00000344204 LACTBP83111 547 aaPredicted RBP15.69■□□□□ 0.1
TRIO-202ENST00000344204 TUBB8Q3ZCM7 444 aa15.69■□□□□ 0.1
TRIO-202ENST00000344204 GOPCQ9HD26 462 aa15.69■□□□□ 0.1
TRIO-202ENST00000344204 SLC3A2P08195 630 aaKnown RBP15.69■□□□□ 0.1
TRIO-202ENST00000344204 EVCP57679 992 aa15.69■□□□□ 0.1
TRIO-202ENST00000344204 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.69■□□□□ 0.1
TRIO-202ENST00000344204 DAAM2Q86T65 1068 aa15.69■□□□□ 0.1
TRIO-202ENST00000344204 AMPHP49418 695 aa15.69■□□□□ 0.1
TRIO-202ENST00000344204 MTHFSP49914 203 aa15.69■□□□□ 0.1
TRIO-202ENST00000344204 ZNF428Q96B54 188 aa15.69■□□□□ 0.1
TRIO-202ENST00000344204 STAC3Q96MF2 364 aa15.69■□□□□ 0.1
TRIO-202ENST00000344204 CFAP43Q8NDM7 1665 aa15.69■□□□□ 0.1
TRIO-202ENST00000344204 ZFYVE27Q5T4F4 411 aa15.69■□□□□ 0.1
TRIO-202ENST00000344204 TOP2BQ02880 1626 aa15.69■□□□□ 0.1
TRIO-202ENST00000344204 ZEB2O60315 1214 aa15.69■□□□□ 0.1
TRIO-202ENST00000344204 USO1O60763 962 aaKnown RBP15.69■□□□□ 0.1
TRIO-202ENST00000344204 C6orf163Q5TEZ5 329 aa15.69■□□□□ 0.1
TRIO-202ENST00000344204 ZNF330Q9Y3S2 320 aaPredicted RBP15.69■□□□□ 0.1
TRIO-202ENST00000344204 DDX58O95786 925 aaKnown RBP15.68■□□□□ 0.1
TRIO-202ENST00000344204 CWC27Q6UX04 472 aaKnown RBP15.68■□□□□ 0.1
TRIO-202ENST00000344204 TSC1Q92574 1164 aa15.68■□□□□ 0.1
TRIO-202ENST00000344204 NUCB1Q02818 461 aa15.68■□□□□ 0.1
TRIO-202ENST00000344204 FAM114A1Q8IWE2 563 aa15.68■□□□□ 0.1
TRIO-202ENST00000344204 LMNTD2Q8IXW0 634 aa15.68■□□□□ 0.1
TRIO-202ENST00000344204 SPATS2LQ9NUQ6 558 aaKnown RBP15.68■□□□□ 0.1
TRIO-202ENST00000344204 TRIM22Q8IYM9 498 aa15.68■□□□□ 0.1
TRIO-202ENST00000344204 CCDC30Q5VVM6 783 aa15.68■□□□□ 0.1
TRIO-202ENST00000344204 CCDC196A0A1B0GTZ2 297 aa15.67■□□□□ 0.1
TRIO-202ENST00000344204 TWISTNBQ3B726 338 aaPredicted RBP15.67■□□□□ 0.1
TRIO-202ENST00000344204 CCDC178Q5BJE1 867 aa15.67■□□□□ 0.1
TRIO-202ENST00000344204 JADE2Q9NQC1 790 aa15.67■□□□□ 0.1
TRIO-202ENST00000344204 NEK11Q8NG66 645 aa15.67■□□□□ 0.1
TRIO-202ENST00000344204 FBF1Q8TES7 1133 aa15.67■□□□□ 0.1
TRIO-202ENST00000344204 MICAL3Q7RTP6 2002 aa15.67■□□□□ 0.1
TRIO-202ENST00000344204 HDAC1Q13547 482 aaPredicted RBP15.67■□□□□ 0.1
TRIO-202ENST00000344204 MYH8P13535 1937 aa15.67■□□□□ 0.1
TRIO-202ENST00000344204 MAP4K4O95819 1239 aaPredicted RBP15.67■□□□□ 0.1
TRIO-202ENST00000344204 PPP2R5AQ15172 486 aa15.67■□□□□ 0.1
TRIO-202ENST00000344204 SPECC1Q5M775 1068 aa15.67■□□□□ 0.1
TRIO-202ENST00000344204 SH2D4BQ5SQS7 431 aa15.67■□□□□ 0.1
TRIO-202ENST00000344204 CDK5RAP3Q96JB5 506 aa15.66■□□□□ 0.1
TRIO-202ENST00000344204 MYH11P35749 1972 aa15.66■□□□□ 0.1
TRIO-202ENST00000344204 KIF1CO43896 1103 aaKnown RBP15.66■□□□□ 0.1
TRIO-202ENST00000344204 JRKLQ9Y4A0 524 aa15.66■□□□□ 0.1
TRIO-202ENST00000344204 KIF4AO95239 1232 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms