RNA–Protein interactions for RNA: ENST00000342579.7

BPTF-204, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene BPTF, Length 4,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-204ENST00000342579 RSPH6AQ9H0K4 717 aa5.34□□□□□ -1.55
BPTF-204ENST00000342579 CLEC11AQ9Y240 323 aa5.34□□□□□ -1.55
BPTF-204ENST00000342579 TMPOP42166 694 aaKnown RBP5.33□□□□□ -1.56
BPTF-204ENST00000342579 FKBP5Q13451 457 aaPredicted RBP5.33□□□□□ -1.56
BPTF-204ENST00000342579 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.33□□□□□ -1.56
BPTF-204ENST00000342579 FBXW7Q969H0 707 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 ZNF428Q96B54 188 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 NLRP3Q96P20 1036 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 ANP32EQ9BTT0 268 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 ZBTB3Q9H5J0 574 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 PIM2Q9P1W9 311 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 PDZRN3Q9UPQ7 1066 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 NHSL1Q5SYE7 1610 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 GPTP24298 496 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 DALRD3Q5D0E6 543 aaKnown RBP5.33□□□□□ -1.56
BPTF-204ENST00000342579 USPL1Q5W0Q7 1092 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 ATG3Q9NT62 314 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 C9orf78Q9NZ63 289 aaPredicted RBP5.33□□□□□ -1.56
BPTF-204ENST00000342579 IFT172Q9UG01 1749 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 TRMT112Q9UI30 125 aaKnown RBP5.33□□□□□ -1.56
BPTF-204ENST00000342579 ADAMTS8Q9UP79 889 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 TMED8Q6PL24 325 aaPredicted RBP5.33□□□□□ -1.56
BPTF-204ENST00000342579 DDX46Q7L014 1031 aaKnown RBP5.33□□□□□ -1.56
BPTF-204ENST00000342579 CNKSR1Q969H4 720 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 FHDC1Q9C0D6 1143 aaPredicted RBP5.33□□□□□ -1.56
BPTF-204ENST00000342579 NPC1L1Q9UHC9 1359 aa5.33□□□□□ -1.56
BPTF-204ENST00000342579 PPP4R3CPQ6ZMV5 832 aa5.32□□□□□ -1.56
BPTF-204ENST00000342579 C2CD5Q86YS7 1000 aa5.32□□□□□ -1.56
BPTF-204ENST00000342579 ZNF496Q96IT1 587 aaPredicted RBP5.32□□□□□ -1.56
BPTF-204ENST00000342579 THUMPD2Q9BTF0 503 aaKnown RBP5.32□□□□□ -1.56
BPTF-204ENST00000342579 GPBP1L1Q9HC44 474 aaPredicted RBP5.32□□□□□ -1.56
BPTF-204ENST00000342579 IPO8O15397 1037 aaKnown RBP5.32□□□□□ -1.56
BPTF-204ENST00000342579 OS9Q13438 667 aaPredicted RBP5.32□□□□□ -1.56
BPTF-204ENST00000342579 RC3H1Q5TC82 1133 aaKnown RBP5.32□□□□□ -1.56
BPTF-204ENST00000342579 SOGA3Q5TF21 947 aa5.32□□□□□ -1.56
BPTF-204ENST00000342579 FTSJ3Q8IY81 847 aaKnown RBP5.32□□□□□ -1.56
BPTF-204ENST00000342579 DBF4Q9UBU7 674 aaPredicted RBP5.32□□□□□ -1.56
BPTF-204ENST00000342579 CD163L1Q9NR16 1453 aa5.32□□□□□ -1.56
BPTF-204ENST00000342579 PER1O15534 1290 aaPredicted RBP5.32□□□□□ -1.56
BPTF-204ENST00000342579 A1BGP04217 495 aa5.32□□□□□ -1.56
BPTF-204ENST00000342579 SERPINB2P05120 415 aa5.32□□□□□ -1.56
BPTF-204ENST00000342579 RTL5Q5HYW3 569 aaPredicted RBP5.32□□□□□ -1.56
BPTF-204ENST00000342579 LMOD1P29536 600 aaPredicted RBP5.32□□□□□ -1.56
BPTF-204ENST00000342579 COL23A1Q86Y22 540 aaPredicted RBP5.32□□□□□ -1.56
BPTF-204ENST00000342579 ARHGEF1Q92888 912 aaKnown RBP5.32□□□□□ -1.56
BPTF-204ENST00000342579 ALDH1B1P30837 517 aa5.31□□□□□ -1.56
BPTF-204ENST00000342579 IL6STP40189 918 aaPredicted RBP5.31□□□□□ -1.56
BPTF-204ENST00000342579 VPS37DQ86XT2 251 aa5.31□□□□□ -1.56
BPTF-204ENST00000342579 CHMP4BQ9H444 224 aaKnown RBP5.31□□□□□ -1.56
BPTF-204ENST00000342579 HYPKQ9NX55 129 aa5.31□□□□□ -1.56
BPTF-204ENST00000342579 MS4A1P11836 297 aa5.31□□□□□ -1.56
BPTF-204ENST00000342579 NKX1-1Q15270 411 aaPredicted RBP5.31□□□□□ -1.56
BPTF-204ENST00000342579 FRAT1Q92837 279 aaPredicted RBP5.31□□□□□ -1.56
BPTF-204ENST00000342579 PHACTR3Q96KR7 559 aa5.31□□□□□ -1.56
BPTF-204ENST00000342579 SYT17Q9BSW7 474 aa5.31□□□□□ -1.56
BPTF-204ENST00000342579 ZBTB1Q9Y2K1 713 aa5.31□□□□□ -1.56
BPTF-204ENST00000342579 C6orf229H3BNL8 230 aa5.31□□□□□ -1.56
BPTF-204ENST00000342579 PARP10Q53GL7 1025 aa5.31□□□□□ -1.56
BPTF-204ENST00000342579 DUSP27Q5VZP5 1158 aa5.31□□□□□ -1.56
BPTF-204ENST00000342579 TTLL6Q8N841 843 aa5.31□□□□□ -1.56
BPTF-204ENST00000342579 MPHOSPH8Q99549 860 aa5.31□□□□□ -1.56
BPTF-204ENST00000342579 UTP14AQ9BVJ6 771 aaKnown RBP5.31□□□□□ -1.56
BPTF-204ENST00000342579 CD2APQ9Y5K6 639 aa5.31□□□□□ -1.56
BPTF-204ENST00000342579 PIP4K2AP48426 406 aaPredicted RBP5.3□□□□□ -1.56
BPTF-204ENST00000342579 EIF6P56537 245 aaKnown RBP5.3□□□□□ -1.56
BPTF-204ENST00000342579 GORABQ5T7V8 394 aa5.3□□□□□ -1.56
BPTF-204ENST00000342579 RBM17Q96I25 401 aaKnown RBP5.3□□□□□ -1.56
BPTF-204ENST00000342579 BCL2L13Q9BXK5 485 aa5.3□□□□□ -1.56
BPTF-204ENST00000342579 NARFQ9UHQ1 456 aa5.3□□□□□ -1.56
BPTF-204ENST00000342579 TWISTNBQ3B726 338 aaPredicted RBP5.3□□□□□ -1.56
BPTF-204ENST00000342579 SMC4Q9NTJ3 1288 aa5.3□□□□□ -1.56
BPTF-204ENST00000342579 SRP68Q9UHB9 627 aaKnown RBP5.3□□□□□ -1.56
BPTF-204ENST00000342579 RGPD8O14715 1765 aaPredicted RBP5.3□□□□□ -1.56
BPTF-204ENST00000342579 IGHMBP2P38935 993 aaKnown RBP5.3□□□□□ -1.56
BPTF-204ENST00000342579 IL17REQ8NFR9 667 aa5.3□□□□□ -1.56
BPTF-204ENST00000342579 ZFP91Q96JP5 570 aaPredicted RBP5.3□□□□□ -1.56
BPTF-204ENST00000342579 C1orf115Q9H7X2 142 aa5.3□□□□□ -1.56
BPTF-204ENST00000342579 ANKRD13DQ6ZTN6 518 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 COPS6Q7L5N1 327 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 PTF1AQ7RTS3 328 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 BABAM1Q9NWV8 329 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 ANKIB1Q9P2G1 1089 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 XIRP1Q702N8 1843 aaKnown RBP5.29□□□□□ -1.56
BPTF-204ENST00000342579 NPM3O75607 178 aaKnown RBP5.29□□□□□ -1.56
BPTF-204ENST00000342579 SLC4A2P04920 1241 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 LINC00116Q8NCU8 138 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 BCCIPQ9P287 314 aaKnown RBP eCLIP5.29□□□□□ -1.56
BPTF-204ENST00000342579 KDM2BQ8NHM5 1336 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 TGFB2P61812 414 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 ZNF827Q17R98 1081 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 CCDC24Q8N4L8 307 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 SUPT20HQ8NEM7 779 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 XAGE3Q8WTP9 111 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 IFT57Q9NWB7 429 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 RNF181Q9P0P0 153 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.29□□□□□ -1.56
BPTF-204ENST00000342579 USP16Q9Y5T5 823 aa5.29□□□□□ -1.56
BPTF-204ENST00000342579 E9PSI1 815 aa5.28□□□□□ -1.56
BPTF-204ENST00000342579 GIGYF1O75420 1035 aaPredicted RBP5.28□□□□□ -1.56
BPTF-204ENST00000342579 LARGE2Q8N3Y3 721 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms