RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 BTBD11A6QL63 1104 aa12.77□□□□□ -0.37
CAPRIN1-201ENST00000341394 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.37
CAPRIN1-201ENST00000341394 HTATSF1O43719 755 aaKnown RBP12.77□□□□□ -0.37
CAPRIN1-201ENST00000341394 CHAF1AQ13111 956 aaPredicted RBP12.77□□□□□ -0.37
CAPRIN1-201ENST00000341394 LARP6Q9BRS8 491 aaKnown RBP12.77□□□□□ -0.37
CAPRIN1-201ENST00000341394 NPHP1O15259 732 aa12.76□□□□□ -0.37
CAPRIN1-201ENST00000341394 MVPQ14764 893 aaKnown RBP12.76□□□□□ -0.37
CAPRIN1-201ENST00000341394 G2E3Q7L622 706 aa12.76□□□□□ -0.37
CAPRIN1-201ENST00000341394 RGS12O14924 1447 aa12.76□□□□□ -0.37
CAPRIN1-201ENST00000341394 CEMIPQ8WUJ3 1361 aa12.76□□□□□ -0.37
CAPRIN1-201ENST00000341394 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
CAPRIN1-201ENST00000341394 GRPEL1Q9HAV7 217 aa12.75□□□□□ -0.37
CAPRIN1-201ENST00000341394 KIAA1211Q6ZU35 1233 aa12.75□□□□□ -0.37
CAPRIN1-201ENST00000341394 KDM3BQ7LBC6 1761 aa12.74□□□□□ -0.37
CAPRIN1-201ENST00000341394 KAT6BQ8WYB5 2073 aa12.74□□□□□ -0.37
CAPRIN1-201ENST00000341394 PRAMEF22A3QJZ6 481 aa12.74□□□□□ -0.37
CAPRIN1-201ENST00000341394 ESPNB1AK53 854 aa12.74□□□□□ -0.37
CAPRIN1-201ENST00000341394 ALDH1L2Q3SY69 923 aa12.74□□□□□ -0.37
CAPRIN1-201ENST00000341394 IFNL2Q8IZJ0 200 aa12.74□□□□□ -0.37
CAPRIN1-201ENST00000341394 UBE2Q2Q8WVN8 375 aa12.74□□□□□ -0.37
CAPRIN1-201ENST00000341394 SIPA1L3O60292 1781 aaPredicted RBP12.74□□□□□ -0.37
CAPRIN1-201ENST00000341394 LARP1Q6PKG0 1096 aaKnown RBP12.74□□□□□ -0.37
CAPRIN1-201ENST00000341394 TTC5Q8N0Z6 440 aa12.74□□□□□ -0.37
CAPRIN1-201ENST00000341394 MRE11P49959 708 aa12.74□□□□□ -0.37
CAPRIN1-201ENST00000341394 KDM4AO75164 1064 aa12.73□□□□□ -0.37
CAPRIN1-201ENST00000341394 MAP4K4O95819 1239 aaPredicted RBP12.73□□□□□ -0.37
CAPRIN1-201ENST00000341394 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
CAPRIN1-201ENST00000341394 ST18O60284 1047 aa12.73□□□□□ -0.37
CAPRIN1-201ENST00000341394 MCCP23508 829 aa12.73□□□□□ -0.37
CAPRIN1-201ENST00000341394 CABP4P57796 275 aa12.73□□□□□ -0.37
CAPRIN1-201ENST00000341394 API5Q9BZZ5 524 aaKnown RBP12.73□□□□□ -0.37
CAPRIN1-201ENST00000341394 HDGFL1Q5TGJ6 251 aa12.73□□□□□ -0.37
CAPRIN1-201ENST00000341394 DDX19BQ9UMR2 479 aa12.73□□□□□ -0.37
CAPRIN1-201ENST00000341394 CPDO75976 1380 aa12.73□□□□□ -0.37
CAPRIN1-201ENST00000341394 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
CAPRIN1-201ENST00000341394 ZCRB1Q8TBF4 217 aaKnown RBP12.73□□□□□ -0.37
CAPRIN1-201ENST00000341394 CCDC30Q5VVM6 783 aa12.72□□□□□ -0.37
CAPRIN1-201ENST00000341394 SYTL4Q96C24 671 aaPredicted RBP12.72□□□□□ -0.37
CAPRIN1-201ENST00000341394 KDM6AO15550 1401 aaPredicted RBP12.72□□□□□ -0.37
CAPRIN1-201ENST00000341394 COL5A2P05997 1499 aaPredicted RBP12.72□□□□□ -0.37
CAPRIN1-201ENST00000341394 IL2RBP14784 551 aa12.72□□□□□ -0.37
CAPRIN1-201ENST00000341394 FKBP5Q13451 457 aaPredicted RBP12.72□□□□□ -0.37
CAPRIN1-201ENST00000341394 SPC24Q8NBT2 197 aa12.72□□□□□ -0.37
CAPRIN1-201ENST00000341394 NGLY1Q96IV0 654 aa12.72□□□□□ -0.37
CAPRIN1-201ENST00000341394 SCN11AQ9UI33 1791 aa12.72□□□□□ -0.37
CAPRIN1-201ENST00000341394 HSP90B1P14625 803 aaKnown RBP12.71□□□□□ -0.37
CAPRIN1-201ENST00000341394 NEK4P51957 841 aa12.71□□□□□ -0.37
CAPRIN1-201ENST00000341394 MEX3CQ5U5Q3 659 aaKnown RBP12.71□□□□□ -0.37
CAPRIN1-201ENST00000341394 VPS37CA5D8V6 355 aaPredicted RBP12.71□□□□□ -0.37
CAPRIN1-201ENST00000341394 F6X3S4 739 aa12.71□□□□□ -0.37
CAPRIN1-201ENST00000341394 CYP27B1O15528 508 aa12.71□□□□□ -0.37
CAPRIN1-201ENST00000341394 C8orf34Q49A92 452 aa12.71□□□□□ -0.37
CAPRIN1-201ENST00000341394 GDPD2Q9HCC8 539 aa12.71□□□□□ -0.37
CAPRIN1-201ENST00000341394 WDR17Q8IZU2 1322 aa12.71□□□□□ -0.37
CAPRIN1-201ENST00000341394 SHANK3Q9BYB0 1731 aa12.71□□□□□ -0.38
CAPRIN1-201ENST00000341394 ANXA1P04083 346 aa12.71□□□□□ -0.38
CAPRIN1-201ENST00000341394 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.38
CAPRIN1-201ENST00000341394 SLC39A6Q13433 755 aa12.71□□□□□ -0.38
CAPRIN1-201ENST00000341394 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.38
CAPRIN1-201ENST00000341394 CHMP4BQ9H444 224 aaKnown RBP12.71□□□□□ -0.38
CAPRIN1-201ENST00000341394 BRPF1P55201 1214 aaPredicted RBP12.7□□□□□ -0.38
CAPRIN1-201ENST00000341394 CREBRFQ8IUR6 639 aa12.7□□□□□ -0.38
CAPRIN1-201ENST00000341394 RRAGDQ9NQL2 400 aaPredicted RBP12.7□□□□□ -0.38
CAPRIN1-201ENST00000341394 ADAMTS7Q9UKP4 1686 aa12.7□□□□□ -0.38
CAPRIN1-201ENST00000341394 ZBTB9Q96C00 473 aa12.7□□□□□ -0.38
CAPRIN1-201ENST00000341394 CHMP4AQ9BY43 222 aa12.7□□□□□ -0.38
CAPRIN1-201ENST00000341394 ZMYND15Q9H091 742 aa12.7□□□□□ -0.38
CAPRIN1-201ENST00000341394 SMARCA5O60264 1052 aaPredicted RBP12.7□□□□□ -0.38
CAPRIN1-201ENST00000341394 ZBTB40Q9NUA8 1239 aa12.7□□□□□ -0.38
CAPRIN1-201ENST00000341394 ABCC4O15439 1325 aa12.7□□□□□ -0.38
CAPRIN1-201ENST00000341394 COL16A1Q07092 1604 aaPredicted RBP12.7□□□□□ -0.38
CAPRIN1-201ENST00000341394 SSFA2P28290 1259 aa12.69□□□□□ -0.38
CAPRIN1-201ENST00000341394 TSHZ3Q63HK5 1081 aa12.69□□□□□ -0.38
CAPRIN1-201ENST00000341394 C8orf37Q96NL8 207 aa12.69□□□□□ -0.38
CAPRIN1-201ENST00000341394 PKD1L3Q7Z443 1732 aa12.69□□□□□ -0.38
CAPRIN1-201ENST00000341394 ZBTB7BO15156 539 aaPredicted RBP12.68□□□□□ -0.38
CAPRIN1-201ENST00000341394 GOLGB1Q14789 3259 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-201ENST00000341394 C5P01031 1676 aa12.68□□□□□ -0.38
CAPRIN1-201ENST00000341394 PHKG2P15735 406 aa12.68□□□□□ -0.38
CAPRIN1-201ENST00000341394 PHAXQ9H814 394 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-201ENST00000341394 EIF4A1P60842 406 aaKnown RBP12.68□□□□□ -0.38
CAPRIN1-201ENST00000341394 FAM177BA6PVY3 158 aa12.67□□□□□ -0.38
CAPRIN1-201ENST00000341394 SIRT2Q8IXJ6 389 aa12.67□□□□□ -0.38
CAPRIN1-201ENST00000341394 CARD10Q9BWT7 1032 aa12.67□□□□□ -0.38
CAPRIN1-201ENST00000341394 EXOC5O00471 708 aa12.67□□□□□ -0.38
CAPRIN1-201ENST00000341394 FIBPO43427 364 aa12.67□□□□□ -0.38
CAPRIN1-201ENST00000341394 AIMP1Q12904 312 aaKnown RBP12.67□□□□□ -0.38
CAPRIN1-201ENST00000341394 DCAF5Q96JK2 942 aa12.67□□□□□ -0.38
CAPRIN1-201ENST00000341394 RBM27Q9P2N5 1060 aaKnown RBP12.67□□□□□ -0.38
CAPRIN1-201ENST00000341394 UPF3BQ9BZI7 483 aaKnown RBP12.67□□□□□ -0.38
CAPRIN1-201ENST00000341394 PTCD1O75127 700 aaKnown RBP12.66□□□□□ -0.38
CAPRIN1-201ENST00000341394 CERKQ8TCT0 537 aa12.66□□□□□ -0.38
CAPRIN1-201ENST00000341394 ZHX1Q9UKY1 873 aaPredicted RBP12.66□□□□□ -0.38
CAPRIN1-201ENST00000341394 PHLPP1O60346 1717 aa12.65□□□□□ -0.38
CAPRIN1-201ENST00000341394 SYCE3A1L190 88 aa12.65□□□□□ -0.38
CAPRIN1-201ENST00000341394 PROSER3Q2NL68 480 aa12.65□□□□□ -0.38
CAPRIN1-201ENST00000341394 CCAR2Q8N163 923 aaKnown RBP12.65□□□□□ -0.38
CAPRIN1-201ENST00000341394 STK11IPQ8N1F8 1099 aa12.65□□□□□ -0.38
CAPRIN1-201ENST00000341394 AHDC1Q5TGY3 1603 aaPredicted RBP12.65□□□□□ -0.38
CAPRIN1-201ENST00000341394 IGSF3O75054 1194 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms