RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 LMOD3Q0VAK6 560 aa29.64■■■□□ 2.34
PBX1-201ENST00000340699 NLGN1Q8N2Q7 840 aa29.64■■■□□ 2.34
PBX1-201ENST00000340699 ZBTB1Q9Y2K1 713 aa29.62■■■□□ 2.33
PBX1-201ENST00000340699 THUMPD2Q9BTF0 503 aaKnown RBP29.61■■■□□ 2.33
PBX1-201ENST00000340699 SOS1Q07889 1333 aaPredicted RBP29.61■■■□□ 2.33
PBX1-201ENST00000340699 CANXP27824 592 aaKnown RBP29.6■■■□□ 2.33
PBX1-201ENST00000340699 NEUROD2Q15784 382 aa29.6■■■□□ 2.33
PBX1-201ENST00000340699 MIS18AQ9NYP9 233 aa29.6■■■□□ 2.33
PBX1-201ENST00000340699 ZPR1O75312 459 aa29.59■■■□□ 2.33
PBX1-201ENST00000340699 GYS1P13807 737 aa29.59■■■□□ 2.33
PBX1-201ENST00000340699 RRP7AQ9Y3A4 280 aaKnown RBP29.59■■■□□ 2.33
PBX1-201ENST00000340699 SNRPA1P09661 255 aaKnown RBP29.58■■■□□ 2.33
PBX1-201ENST00000340699 C4AP0C0L4 1744 aa29.58■■■□□ 2.33
PBX1-201ENST00000340699 USP42Q9H9J4 1324 aaKnown RBP29.57■■■□□ 2.32
PBX1-201ENST00000340699 MMP10P09238 476 aa29.57■■■□□ 2.32
PBX1-201ENST00000340699 SRP68Q9UHB9 627 aaKnown RBP29.57■■■□□ 2.32
PBX1-201ENST00000340699 COL15A1P39059 1388 aa29.56■■■□□ 2.32
PBX1-201ENST00000340699 NPM2Q86SE8 214 aaKnown RBP29.56■■■□□ 2.32
PBX1-201ENST00000340699 CD2APQ9Y5K6 639 aa29.56■■■□□ 2.32
PBX1-201ENST00000340699 A0A087WZG4 1122 aa29.54■■■□□ 2.32
PBX1-201ENST00000340699 USP16Q9Y5T5 823 aa29.54■■■□□ 2.32
PBX1-201ENST00000340699 USPL1Q5W0Q7 1092 aa29.53■■■□□ 2.32
PBX1-201ENST00000340699 NARFQ9UHQ1 456 aa29.53■■■□□ 2.32
PBX1-201ENST00000340699 PARP3Q9Y6F1 533 aa29.53■■■□□ 2.32
PBX1-201ENST00000340699 A1BGP04217 495 aa29.52■■■□□ 2.32
PBX1-201ENST00000340699 EIF5P55010 431 aaKnown RBP29.52■■■□□ 2.32
PBX1-201ENST00000340699 CCDC184Q52MB2 194 aa29.52■■■□□ 2.32
PBX1-201ENST00000340699 NLGN2Q8NFZ4 835 aa29.52■■■□□ 2.32
PBX1-201ENST00000340699 ZNF330Q9Y3S2 320 aaPredicted RBP29.52■■■□□ 2.32
PBX1-201ENST00000340699 PRAMEF22A3QJZ6 481 aa29.51■■■□□ 2.31
PBX1-201ENST00000340699 IL6STP40189 918 aaPredicted RBP29.51■■■□□ 2.31
PBX1-201ENST00000340699 MRS2Q9HD23 443 aa29.51■■■□□ 2.31
PBX1-201ENST00000340699 TSPYL4Q9UJ04 414 aa29.51■■■□□ 2.31
PBX1-201ENST00000340699 KDM3BQ7LBC6 1761 aa29.5■■■□□ 2.31
PBX1-201ENST00000340699 FKBP8Q14318 412 aa29.5■■■□□ 2.31
PBX1-201ENST00000340699 EIF4A1P60842 406 aaKnown RBP29.49■■■□□ 2.31
PBX1-201ENST00000340699 BABAM1Q9NWV8 329 aa29.49■■■□□ 2.31
PBX1-201ENST00000340699 TRIM35Q9UPQ4 493 aa29.48■■■□□ 2.31
PBX1-201ENST00000340699 APAF1O14727 1248 aa29.47■■■□□ 2.31
PBX1-201ENST00000340699 GPR162Q16538 588 aa29.47■■■□□ 2.31
PBX1-201ENST00000340699 PELP1Q8IZL8 1130 aaKnown RBP29.46■■■□□ 2.31
PBX1-201ENST00000340699 GIGYF1O75420 1035 aaPredicted RBP29.45■■■□□ 2.31
PBX1-201ENST00000340699 TBC1D2BQ9UPU7 963 aa29.44■■■□□ 2.3
PBX1-201ENST00000340699 TM4SF1P30408 202 aa29.43■■■□□ 2.3
PBX1-201ENST00000340699 LAS1LQ9Y4W2 734 aaKnown RBP29.43■■■□□ 2.3
PBX1-201ENST00000340699 PIP4K2AP48426 406 aaPredicted RBP29.42■■■□□ 2.3
PBX1-201ENST00000340699 BCL2L12Q9HB09 334 aa29.41■■■□□ 2.3
PBX1-201ENST00000340699 DDR1Q08345 913 aa29.4■■■□□ 2.3
PBX1-201ENST00000340699 DZIP3Q86Y13 1208 aaKnown RBP29.4■■■□□ 2.3
PBX1-201ENST00000340699 LAMB4A4D0S4 1761 aa29.39■■■□□ 2.3
PBX1-201ENST00000340699 NFIXQ14938 502 aa29.39■■■□□ 2.3
PBX1-201ENST00000340699 POLRMTO00411 1230 aaKnown RBP29.38■■■□□ 2.29
PBX1-201ENST00000340699 CHL1O00533 1208 aa29.38■■■□□ 2.29
PBX1-201ENST00000340699 TGFB2P61812 414 aa29.38■■■□□ 2.29
PBX1-201ENST00000340699 CALD1Q05682 793 aaKnown RBP29.38■■■□□ 2.29
PBX1-201ENST00000340699 NBPF26B4DH59 902 aa29.37■■■□□ 2.29
PBX1-201ENST00000340699 NBPF10Q6P3W6 841 aaKnown RBP29.37■■■□□ 2.29
PBX1-201ENST00000340699 NBPF15Q8N660 670 aa29.37■■■□□ 2.29
PBX1-201ENST00000340699 C10orf71Q711Q0 1435 aa29.37■■■□□ 2.29
PBX1-201ENST00000340699 BICDL1Q6ZP65 573 aa29.36■■■□□ 2.29
PBX1-201ENST00000340699 CAMTA2O94983 1202 aa29.35■■■□□ 2.29
PBX1-201ENST00000340699 CFAP44Q96MT7 982 aa29.35■■■□□ 2.29
PBX1-201ENST00000340699 KIF13BQ9NQT8 1826 aa29.34■■■□□ 2.29
PBX1-201ENST00000340699 GRIN3BO60391 1043 aa29.33■■■□□ 2.29
PBX1-201ENST00000340699 SERPINB2P05120 415 aa29.33■■■□□ 2.29
PBX1-201ENST00000340699 TBC1D9BQ66K14 1250 aa29.33■■■□□ 2.29
PBX1-201ENST00000340699 SCN7AQ01118 1682 aa29.33■■■□□ 2.29
PBX1-201ENST00000340699 EIF2S2P20042 333 aaKnown RBP29.32■■■□□ 2.28
PBX1-201ENST00000340699 NGEFQ8N5V2 710 aa29.32■■■□□ 2.28
PBX1-201ENST00000340699 ZNF652Q9Y2D9 606 aa29.32■■■□□ 2.28
PBX1-201ENST00000340699 ERBB4Q15303 1308 aa29.31■■■□□ 2.28
PBX1-201ENST00000340699 A0A0G2JLW4 131 aa29.3■■■□□ 2.28
PBX1-201ENST00000340699 MYL6BP14649 208 aa29.3■■■□□ 2.28
PBX1-201ENST00000340699 YBX3P16989 372 aaKnown RBP eCLIP29.3■■■□□ 2.28
PBX1-201ENST00000340699 YY1P25490 414 aa29.3■■■□□ 2.28
PBX1-201ENST00000340699 GNAI1P63096 354 aa29.3■■■□□ 2.28
PBX1-201ENST00000340699 CLEC4GQ6UXB4 293 aa29.3■■■□□ 2.28
PBX1-201ENST00000340699 SETDB2Q96T68 719 aa29.3■■■□□ 2.28
PBX1-201ENST00000340699 IFT57Q9NWB7 429 aa29.29■■■□□ 2.28
PBX1-201ENST00000340699 WWC3Q9ULE0 1092 aa29.29■■■□□ 2.28
PBX1-201ENST00000340699 PXDNLA1KZ92 1463 aa29.29■■■□□ 2.28
PBX1-201ENST00000340699 DPEP1P16444 411 aa29.28■■■□□ 2.28
PBX1-201ENST00000340699 BCORQ6W2J9 1755 aa29.28■■■□□ 2.28
PBX1-201ENST00000340699 AFDNP55196 1824 aaKnown RBP29.27■■■□□ 2.28
PBX1-201ENST00000340699 N4BP2Q86UW6 1770 aaPredicted RBP29.27■■■□□ 2.28
PBX1-201ENST00000340699 RGL2O15211 777 aa29.27■■■□□ 2.28
PBX1-201ENST00000340699 FAM9BQ8IZU0 186 aa29.27■■■□□ 2.28
PBX1-201ENST00000340699 MBIPQ9NS73 344 aa29.27■■■□□ 2.28
PBX1-201ENST00000340699 CARMIL3Q8ND23 1372 aa29.26■■■□□ 2.28
PBX1-201ENST00000340699 ZNF853P0CG23 659 aa29.26■■■□□ 2.27
PBX1-201ENST00000340699 KIF6Q6ZMV9 814 aa29.26■■■□□ 2.27
PBX1-201ENST00000340699 SENP3-EIF4A1A0A087X0R7 540 aa29.25■■■□□ 2.27
PBX1-201ENST00000340699 NPHP1O15259 732 aa29.25■■■□□ 2.27
PBX1-201ENST00000340699 CCDC27Q2M243 656 aa29.25■■■□□ 2.27
PBX1-201ENST00000340699 KRT24Q2M2I5 525 aa29.24■■■□□ 2.27
PBX1-201ENST00000340699 NECTIN2Q92692 538 aa29.24■■■□□ 2.27
PBX1-201ENST00000340699 NRXN2Q9P2S2 1712 aa29.24■■■□□ 2.27
PBX1-201ENST00000340699 KIAA1551Q9HCM1 1747 aa29.23■■■□□ 2.27
PBX1-201ENST00000340699 HOXB7P09629 217 aa29.23■■■□□ 2.27
PBX1-201ENST00000340699 NCBP3Q53F19 620 aaKnown RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms