RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 IL17RAQ96F46 866 aa24.41■■□□□ 1.5
RUNX3-202ENST00000338888 MIS18AQ9NYP9 233 aa24.41■■□□□ 1.5
RUNX3-202ENST00000338888 SSH2Q76I76 1423 aa24.41■■□□□ 1.5
RUNX3-202ENST00000338888 GOLGA6L6A8MZA4 724 aa24.41■■□□□ 1.5
RUNX3-202ENST00000338888 TXNDC2Q86VQ3 553 aa24.41■■□□□ 1.5
RUNX3-202ENST00000338888 METP08581 1390 aa24.41■■□□□ 1.5
RUNX3-202ENST00000338888 HDGFP51858 240 aaKnown RBP24.4■■□□□ 1.5
RUNX3-202ENST00000338888 PNMA6EA0A0J9YXQ4 647 aa24.4■■□□□ 1.5
RUNX3-202ENST00000338888 PTGS1P23219 599 aa24.4■■□□□ 1.5
RUNX3-202ENST00000338888 AK2P54819 239 aa24.39■■□□□ 1.49
RUNX3-202ENST00000338888 DNM1Q05193 864 aaKnown RBP24.39■■□□□ 1.49
RUNX3-202ENST00000338888 SMC3Q9UQE7 1217 aa24.39■■□□□ 1.49
RUNX3-202ENST00000338888 CDK12Q9NYV4 1490 aaPredicted RBP24.39■■□□□ 1.49
RUNX3-202ENST00000338888 CCT4P50991 539 aaKnown RBP24.38■■□□□ 1.49
RUNX3-202ENST00000338888 NCBP1Q09161 790 aaKnown RBP24.38■■□□□ 1.49
RUNX3-202ENST00000338888 SULT6B1Q6IMI4 303 aa24.38■■□□□ 1.49
RUNX3-202ENST00000338888 FEZ1Q99689 392 aa24.38■■□□□ 1.49
RUNX3-202ENST00000338888 MAP4K4O95819 1239 aaPredicted RBP24.37■■□□□ 1.49
RUNX3-202ENST00000338888 ZNF771Q7L3S4 317 aaPredicted RBP24.37■■□□□ 1.49
RUNX3-202ENST00000338888 ATP6V1DQ9Y5K8 247 aa24.37■■□□□ 1.49
RUNX3-202ENST00000338888 TMEM2Q9UHN6 1383 aa24.37■■□□□ 1.49
RUNX3-202ENST00000338888 OGFRQ9NZT2 677 aa24.37■■□□□ 1.49
RUNX3-202ENST00000338888 FGD1P98174 961 aa24.36■■□□□ 1.49
RUNX3-202ENST00000338888 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.36■■□□□ 1.49
RUNX3-202ENST00000338888 RUFY3Q7L099 469 aa24.36■■□□□ 1.49
RUNX3-202ENST00000338888 STAP2Q9UGK3 403 aa24.36■■□□□ 1.49
RUNX3-202ENST00000338888 SNX14Q9Y5W7 946 aa24.36■■□□□ 1.49
RUNX3-202ENST00000338888 CCDC192P0DO97 292 aa24.35■■□□□ 1.49
RUNX3-202ENST00000338888 LTKP29376 864 aa24.35■■□□□ 1.49
RUNX3-202ENST00000338888 COG3Q96JB2 828 aa24.35■■□□□ 1.49
RUNX3-202ENST00000338888 C16orf45Q96MC5 204 aaPredicted RBP24.35■■□□□ 1.49
RUNX3-202ENST00000338888 LIMCH1Q9UPQ0 1083 aa24.35■■□□□ 1.49
RUNX3-202ENST00000338888 TTC14Q96N46 770 aa24.35■■□□□ 1.49
RUNX3-202ENST00000338888 IL1RAPL2Q9NP60 686 aa24.35■■□□□ 1.49
RUNX3-202ENST00000338888 CHMP3Q9Y3E7 222 aa24.34■■□□□ 1.49
RUNX3-202ENST00000338888 CPA1P15085 419 aa24.34■■□□□ 1.49
RUNX3-202ENST00000338888 LRMPQ12912 555 aa24.34■■□□□ 1.49
RUNX3-202ENST00000338888 NAA30Q147X3 362 aaPredicted RBP24.34■■□□□ 1.49
RUNX3-202ENST00000338888 RASEFQ8IZ41 740 aa24.34■■□□□ 1.49
RUNX3-202ENST00000338888 CCDC186Q7Z3E2 898 aa24.33■■□□□ 1.49
RUNX3-202ENST00000338888 NUTM1Q86Y26 1132 aa24.33■■□□□ 1.49
RUNX3-202ENST00000338888 NRXN3Q9Y4C0 1643 aa24.33■■□□□ 1.48
RUNX3-202ENST00000338888 LARGE1O95461 756 aa24.32■■□□□ 1.48
RUNX3-202ENST00000338888 ATP8B2P98198 1209 aa24.32■■□□□ 1.48
RUNX3-202ENST00000338888 CTNNA3Q9UI47 895 aa24.32■■□□□ 1.48
RUNX3-202ENST00000338888 ATP7BP35670 1465 aa24.32■■□□□ 1.48
RUNX3-202ENST00000338888 LUZP1Q86V48 1076 aa24.32■■□□□ 1.48
RUNX3-202ENST00000338888 AATKQ6ZMQ8 1374 aa24.32■■□□□ 1.48
RUNX3-202ENST00000338888 GJB2P29033 226 aa24.31■■□□□ 1.48
RUNX3-202ENST00000338888 CCDC83Q8IWF9 413 aa24.31■■□□□ 1.48
RUNX3-202ENST00000338888 UBR1Q8IWV7 1749 aa24.31■■□□□ 1.48
RUNX3-202ENST00000338888 CAMK4Q16566 473 aa24.31■■□□□ 1.48
RUNX3-202ENST00000338888 FAM200AQ8TCP9 573 aa24.31■■□□□ 1.48
RUNX3-202ENST00000338888 SLC26A8Q96RN1 970 aa24.31■■□□□ 1.48
RUNX3-202ENST00000338888 BCL11BQ9C0K0 894 aaPredicted RBP24.31■■□□□ 1.48
RUNX3-202ENST00000338888 MTMR6Q9Y217 621 aa24.31■■□□□ 1.48
RUNX3-202ENST00000338888 DRC7Q8IY82 874 aa24.31■■□□□ 1.48
RUNX3-202ENST00000338888 CGNQ9P2M7 1197 aaKnown RBP24.31■■□□□ 1.48
RUNX3-202ENST00000338888 NRBP1Q9UHY1 535 aa24.31■■□□□ 1.48
RUNX3-202ENST00000338888 RAD50Q92878 1312 aa24.3■■□□□ 1.48
RUNX3-202ENST00000338888 TUBGCP6Q96RT7 1819 aa24.3■■□□□ 1.48
RUNX3-202ENST00000338888 SETD1AO15047 1707 aaKnown RBP24.3■■□□□ 1.48
RUNX3-202ENST00000338888 BBXQ8WY36 941 aaPredicted RBP24.3■■□□□ 1.48
RUNX3-202ENST00000338888 VPS37CA5D8V6 355 aaPredicted RBP24.29■■□□□ 1.48
RUNX3-202ENST00000338888 SMTNL1A8MU46 457 aa24.29■■□□□ 1.48
RUNX3-202ENST00000338888 TNNT1P13805 278 aa24.29■■□□□ 1.48
RUNX3-202ENST00000338888 EIF4A2Q14240 407 aaKnown RBP24.29■■□□□ 1.48
RUNX3-202ENST00000338888 EDC4Q6P2E9 1401 aaKnown RBP24.28■■□□□ 1.48
RUNX3-202ENST00000338888 SGSM2O43147 1006 aa24.28■■□□□ 1.48
RUNX3-202ENST00000338888 EPB41L2O43491 1005 aaKnown RBP24.28■■□□□ 1.48
RUNX3-202ENST00000338888 MRVI1Q9Y6F6 885 aa24.28■■□□□ 1.48
RUNX3-202ENST00000338888 GNAI3P08754 354 aa24.28■■□□□ 1.48
RUNX3-202ENST00000338888 NCKAP5LQ9HCH0 1330 aa24.28■■□□□ 1.48
RUNX3-202ENST00000338888 LRRFIP2Q9Y608 721 aaKnown RBP24.28■■□□□ 1.48
RUNX3-202ENST00000338888 CASTP20810 708 aaKnown RBP24.27■■□□□ 1.48
RUNX3-202ENST00000338888 TYRO3Q06418 890 aa24.27■■□□□ 1.48
RUNX3-202ENST00000338888 TSPYL4Q9UJ04 414 aa24.27■■□□□ 1.48
RUNX3-202ENST00000338888 C3P01024 1663 aa24.27■■□□□ 1.48
RUNX3-202ENST00000338888 MAP3K11Q16584 847 aa24.27■■□□□ 1.48
RUNX3-202ENST00000338888 KLHL34Q8N239 644 aa24.27■■□□□ 1.48
RUNX3-202ENST00000338888 RTF1Q92541 710 aaKnown RBP24.27■■□□□ 1.48
RUNX3-202ENST00000338888 LSG1Q9H089 658 aaKnown RBP24.27■■□□□ 1.48
RUNX3-202ENST00000338888 EID1Q9Y6B2 187 aa24.27■■□□□ 1.48
RUNX3-202ENST00000338888 SYCP1Q15431 976 aa24.26■■□□□ 1.47
RUNX3-202ENST00000338888 CKAP2LQ8IYA6 745 aa24.26■■□□□ 1.47
RUNX3-202ENST00000338888 DDX41Q9UJV9 622 aaKnown RBP24.26■■□□□ 1.47
RUNX3-202ENST00000338888 SPG7Q9UQ90 795 aa24.26■■□□□ 1.47
RUNX3-202ENST00000338888 FER1L4A9Z1Z3 1794 aa24.26■■□□□ 1.47
RUNX3-202ENST00000338888 LIG1P18858 919 aa24.25■■□□□ 1.47
RUNX3-202ENST00000338888 NUP62CLQ9H1M0 184 aa24.25■■□□□ 1.47
RUNX3-202ENST00000338888 DLC1Q96QB1 1528 aa24.25■■□□□ 1.47
RUNX3-202ENST00000338888 CCDC112Q8NEF3 446 aa24.25■■□□□ 1.47
RUNX3-202ENST00000338888 TRIM5Q9C035 493 aa24.25■■□□□ 1.47
RUNX3-202ENST00000338888 HYPKQ9NX55 129 aa24.25■■□□□ 1.47
RUNX3-202ENST00000338888 WASLO00401 505 aaPredicted RBP24.24■■□□□ 1.47
RUNX3-202ENST00000338888 GABPB1Q06547 395 aaPredicted RBP24.24■■□□□ 1.47
RUNX3-202ENST00000338888 TAF3Q5VWG9 929 aa24.24■■□□□ 1.47
RUNX3-202ENST00000338888 ZSCAN25Q6NSZ9 544 aa24.24■■□□□ 1.47
RUNX3-202ENST00000338888 CWC27Q6UX04 472 aaKnown RBP24.24■■□□□ 1.47
RUNX3-202ENST00000338888 TTC6Q86TZ1 520 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms