RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 BTBD11A6QL63 1104 aa20.23■□□□□ 0.83
PRKN-201ENST00000338468 ADRA2BP18089 450 aa20.23■□□□□ 0.83
PRKN-201ENST00000338468 PNNQ9H307 717 aaKnown RBP20.23■□□□□ 0.83
PRKN-201ENST00000338468 HEG1Q9ULI3 1381 aa20.22■□□□□ 0.83
PRKN-201ENST00000338468 NEFMP07197 916 aa20.22■□□□□ 0.83
PRKN-201ENST00000338468 CCDC87Q9NVE4 849 aa20.22■□□□□ 0.83
PRKN-201ENST00000338468 MAPK8IP3Q9UPT6 1336 aa20.22■□□□□ 0.83
PRKN-201ENST00000338468 ZNF526Q8TF50 670 aaPredicted RBP20.21■□□□□ 0.83
PRKN-201ENST00000338468 HSPA6P17066 643 aa20.2■□□□□ 0.82
PRKN-201ENST00000338468 THUMPD2Q9BTF0 503 aaKnown RBP20.2■□□□□ 0.82
PRKN-201ENST00000338468 ADAMTS8Q9UP79 889 aa20.2■□□□□ 0.82
PRKN-201ENST00000338468 ZBTB1Q9Y2K1 713 aa20.2■□□□□ 0.82
PRKN-201ENST00000338468 SOS1Q07889 1333 aaPredicted RBP20.2■□□□□ 0.82
PRKN-201ENST00000338468 CCDC146Q8IYE0 955 aa20.19■□□□□ 0.82
PRKN-201ENST00000338468 FMNL2Q96PY5 1086 aa20.19■□□□□ 0.82
PRKN-201ENST00000338468 GYS1P13807 737 aa20.18■□□□□ 0.82
PRKN-201ENST00000338468 TAF7Q15545 349 aaPredicted RBP20.18■□□□□ 0.82
PRKN-201ENST00000338468 CCDC184Q52MB2 194 aa20.18■□□□□ 0.82
PRKN-201ENST00000338468 SRP68Q9UHB9 627 aaKnown RBP20.18■□□□□ 0.82
PRKN-201ENST00000338468 RFC4P35249 363 aa20.17■□□□□ 0.82
PRKN-201ENST00000338468 TMPOP42166 694 aaKnown RBP20.17■□□□□ 0.82
PRKN-201ENST00000338468 WDR43Q15061 677 aaKnown RBP eCLIP20.17■□□□□ 0.823e-8■■■■■ 70.1
PRKN-201ENST00000338468 MIS18AQ9NYP9 233 aa20.17■□□□□ 0.82
PRKN-201ENST00000338468 KDM3BQ7LBC6 1761 aa20.16■□□□□ 0.82
PRKN-201ENST00000338468 PRAMEF22A3QJZ6 481 aa20.16■□□□□ 0.82
PRKN-201ENST00000338468 USP42Q9H9J4 1324 aaKnown RBP20.16■□□□□ 0.82
PRKN-201ENST00000338468 STARD3NLO95772 234 aa20.15■□□□□ 0.82
PRKN-201ENST00000338468 RIPK4P57078 832 aa20.15■□□□□ 0.82
PRKN-201ENST00000338468 RUNDC1Q96C34 613 aa20.15■□□□□ 0.82
PRKN-201ENST00000338468 WWC3Q9ULE0 1092 aa20.15■□□□□ 0.82
PRKN-201ENST00000338468 COL15A1P39059 1388 aa20.14■□□□□ 0.81
PRKN-201ENST00000338468 MMP10P09238 476 aa20.14■□□□□ 0.81
PRKN-201ENST00000338468 NLGN1Q8N2Q7 840 aa20.14■□□□□ 0.81
PRKN-201ENST00000338468 TEX13AQ9BXU3 409 aaPredicted RBP20.14■□□□□ 0.81
PRKN-201ENST00000338468 RRP7AQ9Y3A4 280 aaKnown RBP20.14■□□□□ 0.81
PRKN-201ENST00000338468 USP16Q9Y5T5 823 aa20.14■□□□□ 0.81
PRKN-201ENST00000338468 A1BGP04217 495 aa20.13■□□□□ 0.81
PRKN-201ENST00000338468 CANXP27824 592 aaKnown RBP20.13■□□□□ 0.81
PRKN-201ENST00000338468 EIF5P55010 431 aaKnown RBP20.13■□□□□ 0.81
PRKN-201ENST00000338468 FKBP8Q14318 412 aa20.13■□□□□ 0.81
PRKN-201ENST00000338468 SNRPA1P09661 255 aaKnown RBP20.11■□□□□ 0.81
PRKN-201ENST00000338468 BCL2L12Q9HB09 334 aa20.11■□□□□ 0.81
PRKN-201ENST00000338468 TRIM35Q9UPQ4 493 aa20.11■□□□□ 0.81
PRKN-201ENST00000338468 USPL1Q5W0Q7 1092 aa20.1■□□□□ 0.81
PRKN-201ENST00000338468 PNISRQ8TF01 805 aaKnown RBP20.1■□□□□ 0.81
PRKN-201ENST00000338468 NARFQ9UHQ1 456 aa20.1■□□□□ 0.81
PRKN-201ENST00000338468 EIF4A1P60842 406 aaKnown RBP20.09■□□□□ 0.81
PRKN-201ENST00000338468 NEUROD2Q15784 382 aa20.09■□□□□ 0.81
PRKN-201ENST00000338468 ANP32CO43423 234 aa20.08■□□□□ 0.81
PRKN-201ENST00000338468 TM4SF1P30408 202 aa20.08■□□□□ 0.81
PRKN-201ENST00000338468 IL6STP40189 918 aaPredicted RBP20.08■□□□□ 0.81
PRKN-201ENST00000338468 DDR1Q08345 913 aa20.08■□□□□ 0.81
PRKN-201ENST00000338468 KIF13BQ9NQT8 1826 aa20.08■□□□□ 0.8
PRKN-201ENST00000338468 KIF3CO14782 793 aa20.07■□□□□ 0.8
PRKN-201ENST00000338468 ZPR1O75312 459 aa20.07■□□□□ 0.8
PRKN-201ENST00000338468 PIP4K2AP48426 406 aaPredicted RBP20.07■□□□□ 0.8
PRKN-201ENST00000338468 LMOD3Q0VAK6 560 aa20.07■□□□□ 0.8
PRKN-201ENST00000338468 C10orf71Q711Q0 1435 aa20.07■□□□□ 0.8
PRKN-201ENST00000338468 LAMB4A4D0S4 1761 aa20.06■□□□□ 0.8
PRKN-201ENST00000338468 NBPF26B4DH59 902 aa20.06■□□□□ 0.8
PRKN-201ENST00000338468 NBPF10Q6P3W6 841 aaKnown RBP20.06■□□□□ 0.8
PRKN-201ENST00000338468 NBPF15Q8N660 670 aa20.06■□□□□ 0.8
PRKN-201ENST00000338468 KIAA1551Q9HCM1 1747 aa20.06■□□□□ 0.8
PRKN-201ENST00000338468 PXDNLA1KZ92 1463 aa20.05■□□□□ 0.8
PRKN-201ENST00000338468 APAF1O14727 1248 aa20.05■□□□□ 0.8
PRKN-201ENST00000338468 TSPYL4Q9UJ04 414 aa20.05■□□□□ 0.8
PRKN-201ENST00000338468 PARP3Q9Y6F1 533 aa20.05■□□□□ 0.8
PRKN-201ENST00000338468 SCN7AQ01118 1682 aa20.05■□□□□ 0.8
PRKN-201ENST00000338468 A0A087WZG4 1122 aa20.04■□□□□ 0.8
PRKN-201ENST00000338468 POLRMTO00411 1230 aaKnown RBP20.04■□□□□ 0.8
PRKN-201ENST00000338468 APLP1P51693 650 aa20.04■□□□□ 0.8
PRKN-201ENST00000338468 NFIXQ14938 502 aa20.04■□□□□ 0.8
PRKN-201ENST00000338468 TBC1D2BQ9UPU7 963 aa20.04■□□□□ 0.8
PRKN-201ENST00000338468 BABAM1Q9NWV8 329 aa20.03■□□□□ 0.8
PRKN-201ENST00000338468 ZNF330Q9Y3S2 320 aaPredicted RBP20.03■□□□□ 0.8
PRKN-201ENST00000338468 CHL1O00533 1208 aa20.02■□□□□ 0.8
PRKN-201ENST00000338468 CAMTA2O94983 1202 aa20.02■□□□□ 0.8
PRKN-201ENST00000338468 MRS2Q9HD23 443 aa20.02■□□□□ 0.8
PRKN-201ENST00000338468 BCORQ6W2J9 1755 aa20.01■□□□□ 0.79
PRKN-201ENST00000338468 TGFB2P61812 414 aa20.01■□□□□ 0.79
PRKN-201ENST00000338468 NRXN2Q9P2S2 1712 aa20.01■□□□□ 0.79
PRKN-201ENST00000338468 TOMM70O94826 608 aa20■□□□□ 0.79
PRKN-201ENST00000338468 BCS1LQ9Y276 419 aa20■□□□□ 0.79
PRKN-201ENST00000338468 N4BP2Q86UW6 1770 aaPredicted RBP20■□□□□ 0.79
PRKN-201ENST00000338468 AFDNP55196 1824 aaKnown RBP19.99■□□□□ 0.79
PRKN-201ENST00000338468 TBC1D9BQ66K14 1250 aa19.99■□□□□ 0.79
PRKN-201ENST00000338468 DZIP3Q86Y13 1208 aaKnown RBP19.99■□□□□ 0.79
PRKN-201ENST00000338468 KRT24Q2M2I5 525 aa19.97■□□□□ 0.79
PRKN-201ENST00000338468 A0A0G2JLW4 131 aa19.96■□□□□ 0.79
PRKN-201ENST00000338468 SERPINB2P05120 415 aa19.96■□□□□ 0.79
PRKN-201ENST00000338468 ZNF853P0CG23 659 aa19.96■□□□□ 0.79
PRKN-201ENST00000338468 DPEP1P16444 411 aa19.96■□□□□ 0.79
PRKN-201ENST00000338468 BICDL1Q6ZP65 573 aa19.96■□□□□ 0.79
PRKN-201ENST00000338468 ARHGAP27Q6ZUM4 889 aa19.96■□□□□ 0.79
PRKN-201ENST00000338468 LAS1LQ9Y4W2 734 aaKnown RBP19.96■□□□□ 0.79
PRKN-201ENST00000338468 KCNA3P22001 575 aa19.95■□□□□ 0.78
PRKN-201ENST00000338468 CFAP44Q96MT7 982 aa19.95■□□□□ 0.78
PRKN-201ENST00000338468 CARMIL3Q8ND23 1372 aa19.95■□□□□ 0.78
PRKN-201ENST00000338468 BRCA1P38398 1863 aaKnown RBP19.94■□□□□ 0.78
PRKN-201ENST00000338468 PDIA6Q15084 440 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms