RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 GNAI3P08754 354 aa16.91■□□□□ 0.3
SF1-202ENST00000334944 ZSCAN20P17040 1043 aaPredicted RBP16.91■□□□□ 0.3
SF1-202ENST00000334944 EIF4A1P60842 406 aaKnown RBP16.91■□□□□ 0.3
SF1-202ENST00000334944 UNC5CLQ8IV45 518 aa16.91■□□□□ 0.3
SF1-202ENST00000334944 CAVIN1Q6NZI2 390 aaKnown RBP16.9■□□□□ 0.3
SF1-202ENST00000334944 ATP8B2P98198 1209 aa16.9■□□□□ 0.3
SF1-202ENST00000334944 CASC1Q6TDU7 716 aa16.9■□□□□ 0.3
SF1-202ENST00000334944 PROSER2Q86WR7 435 aaPredicted RBP16.9■□□□□ 0.3
SF1-202ENST00000334944 VGLL3A8MV65 326 aa16.9■□□□□ 0.3
SF1-202ENST00000334944 PKP1Q13835 747 aa16.9■□□□□ 0.3
SF1-202ENST00000334944 PROSER3Q2NL68 480 aa16.9■□□□□ 0.3
SF1-202ENST00000334944 ANKRD24Q8TF21 1146 aa16.9■□□□□ 0.3
SF1-202ENST00000334944 AK9Q5TCS8 1911 aa16.89■□□□□ 0.29
SF1-202ENST00000334944 SURF6O75683 361 aaKnown RBP16.89■□□□□ 0.29
SF1-202ENST00000334944 MX1P20591 662 aa16.89■□□□□ 0.29
SF1-202ENST00000334944 DMTNQ08495 405 aa16.89■□□□□ 0.29
SF1-202ENST00000334944 PPP1R42Q7Z4L9 355 aa16.89■□□□□ 0.29
SF1-202ENST00000334944 LTN1O94822 1766 aa16.89■□□□□ 0.29
SF1-202ENST00000334944 RBSNQ9H1K0 784 aa16.89■□□□□ 0.29
SF1-202ENST00000334944 NCOA3Q9Y6Q9 1424 aa16.89■□□□□ 0.29
SF1-202ENST00000334944 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
SF1-202ENST00000334944 RAB3GAP1Q15042 981 aa16.88■□□□□ 0.29
SF1-202ENST00000334944 FOXD4L5Q5VV16 416 aaPredicted RBP16.88■□□□□ 0.29
SF1-202ENST00000334944 FOXD4L4Q8WXT5 416 aaPredicted RBP16.88■□□□□ 0.29
SF1-202ENST00000334944 CHAMP1Q96JM3 812 aa16.88■□□□□ 0.29
SF1-202ENST00000334944 SRCIN1Q9C0H9 1055 aa16.88■□□□□ 0.29
SF1-202ENST00000334944 RGPD2P0DJD1 1756 aa16.88■□□□□ 0.29
SF1-202ENST00000334944 SRGAP3O43295 1099 aa16.88■□□□□ 0.29
SF1-202ENST00000334944 KCNH5Q8NCM2 988 aa16.88■□□□□ 0.29
SF1-202ENST00000334944 CABLES1Q8TDN4 633 aa16.88■□□□□ 0.29
SF1-202ENST00000334944 ERC2O15083 957 aa16.87■□□□□ 0.29
SF1-202ENST00000334944 C1orf141Q5JVX7 400 aa16.87■□□□□ 0.29
SF1-202ENST00000334944 ZGPATQ8N5A5 531 aaKnown RBP16.87■□□□□ 0.29
SF1-202ENST00000334944 AIMP1Q12904 312 aaKnown RBP16.87■□□□□ 0.29
SF1-202ENST00000334944 SKOR2Q2VWA4 1001 aaPredicted RBP16.87■□□□□ 0.29
SF1-202ENST00000334944 KRT28Q7Z3Y7 464 aa16.87■□□□□ 0.29
SF1-202ENST00000334944 RBM27Q9P2N5 1060 aaKnown RBP16.87■□□□□ 0.29
SF1-202ENST00000334944 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
SF1-202ENST00000334944 RABEP1Q15276 862 aa16.86■□□□□ 0.29
SF1-202ENST00000334944 PPP4R3BQ5MIZ7 849 aa16.86■□□□□ 0.29
SF1-202ENST00000334944 ARHGEF25Q86VW2 580 aa16.86■□□□□ 0.29
SF1-202ENST00000334944 ANO2Q9NQ90 1003 aa16.86■□□□□ 0.29
SF1-202ENST00000334944 PXDNQ92626 1479 aa16.86■□□□□ 0.29
SF1-202ENST00000334944 SLC39A6Q13433 755 aa16.86■□□□□ 0.29
SF1-202ENST00000334944 PLEKHO1Q53GL0 409 aaPredicted RBP16.86■□□□□ 0.29
SF1-202ENST00000334944 MCTP1Q6DN14 999 aa16.86■□□□□ 0.29
SF1-202ENST00000334944 IL25Q9H293 177 aa16.86■□□□□ 0.29
SF1-202ENST00000334944 NOL7Q9UMY1 257 aaKnown RBP16.86■□□□□ 0.29
SF1-202ENST00000334944 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
SF1-202ENST00000334944 ZBTB22O15209 634 aa16.85■□□□□ 0.29
SF1-202ENST00000334944 PALD1Q9ULE6 856 aa16.85■□□□□ 0.29
SF1-202ENST00000334944 DYNC1I1O14576 645 aa16.85■□□□□ 0.29
SF1-202ENST00000334944 DNTTIP2Q5QJE6 756 aaKnown RBP16.85■□□□□ 0.29
SF1-202ENST00000334944 RNF214Q8ND24 703 aa16.85■□□□□ 0.29
SF1-202ENST00000334944 CCDC94Q9BW85 323 aaPredicted RBP16.85■□□□□ 0.29
SF1-202ENST00000334944 CHD2O14647 1828 aaKnown RBP16.85■□□□□ 0.29
SF1-202ENST00000334944 IBTKQ9P2D0 1353 aaPredicted RBP16.85■□□□□ 0.29
SF1-202ENST00000334944 NFAT5O94916 1531 aa16.85■□□□□ 0.29
SF1-202ENST00000334944 SPDYE4A6NLX3 237 aa16.85■□□□□ 0.29
SF1-202ENST00000334944 REC8O95072 547 aa16.85■□□□□ 0.29
SF1-202ENST00000334944 PIP4K2AP48426 406 aaPredicted RBP16.85■□□□□ 0.29
SF1-202ENST00000334944 PRIM1P49642 420 aaKnown RBP16.85■□□□□ 0.29
SF1-202ENST00000334944 TERF1P54274 439 aa16.85■□□□□ 0.29
SF1-202ENST00000334944 CWF19L2Q2TBE0 894 aaKnown RBP16.85■□□□□ 0.29
SF1-202ENST00000334944 AEBP2Q6ZN18 517 aaPredicted RBP16.85■□□□□ 0.29
SF1-202ENST00000334944 DNAAF4Q8WXU2 420 aa16.85■□□□□ 0.29
SF1-202ENST00000334944 SOS1Q07889 1333 aaPredicted RBP16.85■□□□□ 0.29
SF1-202ENST00000334944 AKAP4Q5JQC9 854 aa16.84■□□□□ 0.29
SF1-202ENST00000334944 NAP1L2Q9ULW6 460 aaPredicted RBP16.84■□□□□ 0.29
SF1-202ENST00000334944 RNMTO43148 476 aaKnown RBP16.84■□□□□ 0.29
SF1-202ENST00000334944 NLRP2Q9NX02 1062 aa16.84■□□□□ 0.29
SF1-202ENST00000334944 FAM208AQ9UK61 1670 aaKnown RBP16.84■□□□□ 0.29
SF1-202ENST00000334944 NEK4P51957 841 aa16.83■□□□□ 0.29
SF1-202ENST00000334944 LRRC37A3O60309 1634 aa16.83■□□□□ 0.29
SF1-202ENST00000334944 NPHP4O75161 1426 aaPredicted RBP16.83■□□□□ 0.29
SF1-202ENST00000334944 SALL3Q9BXA9 1300 aa16.83■□□□□ 0.28
SF1-202ENST00000334944 ZNF500O60304 480 aaPredicted RBP16.83■□□□□ 0.28
SF1-202ENST00000334944 CHRNA2Q15822 529 aa16.83■□□□□ 0.28
SF1-202ENST00000334944 BEND3Q5T5X7 828 aa16.83■□□□□ 0.28
SF1-202ENST00000334944 PLCD3Q8N3E9 789 aa16.83■□□□□ 0.28
SF1-202ENST00000334944 MAP3K2Q9Y2U5 619 aa16.83■□□□□ 0.28
SF1-202ENST00000334944 OS9Q13438 667 aaPredicted RBP16.82■□□□□ 0.28
SF1-202ENST00000334944 ESYT1Q9BSJ8 1104 aa16.82■□□□□ 0.28
SF1-202ENST00000334944 UPF3BQ9BZI7 483 aaKnown RBP16.82■□□□□ 0.28
SF1-202ENST00000334944 OSBPL3Q9H4L5 887 aa16.82■□□□□ 0.28
SF1-202ENST00000334944 PA2G4Q9UQ80 394 aaKnown RBP16.82■□□□□ 0.28
SF1-202ENST00000334944 ZKSCAN5Q9Y2L8 839 aa16.82■□□□□ 0.28
SF1-202ENST00000334944 BAG4O95429 457 aaKnown RBP16.82■□□□□ 0.28
SF1-202ENST00000334944 GOLGA6L22H0YM25 854 aa16.81■□□□□ 0.28
SF1-202ENST00000334944 CHMLP26374 656 aa16.81■□□□□ 0.28
SF1-202ENST00000334944 ATP2B3Q16720 1220 aa16.81■□□□□ 0.28
SF1-202ENST00000334944 ZSCAN23Q3MJ62 389 aa16.81■□□□□ 0.28
SF1-202ENST00000334944 SASS6Q6UVJ0 657 aa16.81■□□□□ 0.28
SF1-202ENST00000334944 DTNBO60941 627 aa16.81■□□□□ 0.28
SF1-202ENST00000334944 RHPN1Q8TCX5 695 aa16.81■□□□□ 0.28
SF1-202ENST00000334944 SSH3Q8TE77 659 aa16.81■□□□□ 0.28
SF1-202ENST00000334944 ADCY9O60503 1353 aa16.8■□□□□ 0.28
SF1-202ENST00000334944 MYL6BP14649 208 aa16.8■□□□□ 0.28
SF1-202ENST00000334944 CIZ1Q9ULV3 898 aaPredicted RBP16.8■□□□□ 0.28
SF1-202ENST00000334944 ST18O60284 1047 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms