RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 CFAP100Q494V2 611 aa11.91□□□□□ -0.5
SPTBN1-201ENST00000333896 ARFGAP2Q8N6H7 521 aa11.91□□□□□ -0.5
SPTBN1-201ENST00000333896 CCDC114Q96M63 670 aa11.91□□□□□ -0.5
SPTBN1-201ENST00000333896 ZKSCAN8Q15776 578 aaPredicted RBP11.91□□□□□ -0.5
SPTBN1-201ENST00000333896 CEP120Q8N960 986 aa11.91□□□□□ -0.5
SPTBN1-201ENST00000333896 LARP1Q6PKG0 1096 aaKnown RBP11.91□□□□□ -0.5
SPTBN1-201ENST00000333896 TOP1P11387 765 aaKnown RBP11.9□□□□□ -0.5
SPTBN1-201ENST00000333896 DRC1Q96MC2 740 aa11.9□□□□□ -0.5
SPTBN1-201ENST00000333896 STIM2Q9P246 746 aa11.9□□□□□ -0.5
SPTBN1-201ENST00000333896 TMCO4Q5TGY1 634 aa11.9□□□□□ -0.5
SPTBN1-201ENST00000333896 MACROD2A1Z1Q3 448 aa11.9□□□□□ -0.5
SPTBN1-201ENST00000333896 MAP7Q14244 749 aa11.9□□□□□ -0.5
SPTBN1-201ENST00000333896 NUTM2FA1L443 756 aa11.9□□□□□ -0.5
SPTBN1-201ENST00000333896 HLTFQ14527 1009 aaKnown RBP eCLIP11.9□□□□□ -0.56e-10■□□□□ 9.9
SPTBN1-201ENST00000333896 CEP128Q6ZU80 1094 aa11.9□□□□□ -0.5
SPTBN1-201ENST00000333896 FSD1Q9BTV5 496 aa11.9□□□□□ -0.5
SPTBN1-201ENST00000333896 CYP46A1Q9Y6A2 500 aa11.9□□□□□ -0.5
SPTBN1-201ENST00000333896 PPP1R14CQ8TAE6 165 aa11.9□□□□□ -0.5
SPTBN1-201ENST00000333896 FAM76AQ8TAV0 307 aa11.9□□□□□ -0.5
SPTBN1-201ENST00000333896 ERO1AQ96HE7 468 aa11.9□□□□□ -0.5
SPTBN1-201ENST00000333896 INPP5BP32019 993 aa11.9□□□□□ -0.51
SPTBN1-201ENST00000333896 EIF4G1Q04637 1599 aaKnown RBP11.9□□□□□ -0.51
SPTBN1-201ENST00000333896 FSD2A1L4K1 749 aa11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 NLRP5P59047 1200 aa11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 CACNA2D3Q8IZS8 1091 aa11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 TTC16Q8NEE8 873 aa11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 RAB3IL1Q8TBN0 382 aa11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 PSMC4P43686 418 aa11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 CTAGE9A4FU28 777 aa11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 BUB1BO60566 1050 aaPredicted RBP11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 PKD2Q13563 968 aa11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 MAATS1Q7Z4T9 603 aa11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 USP25Q9UHP3 1055 aa11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 USO1O60763 962 aaKnown RBP11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 PRDM2Q13029 1718 aa11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 GCKP35557 465 aa11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 KLHL34Q8N239 644 aa11.89□□□□□ -0.51
SPTBN1-201ENST00000333896 SSBP05455 408 aaKnown RBP eCLIP11.88□□□□□ -0.51
SPTBN1-201ENST00000333896 HYPKQ9NX55 129 aa11.88□□□□□ -0.51
SPTBN1-201ENST00000333896 A0A1W2PRG0 241 aa11.88□□□□□ -0.51
SPTBN1-201ENST00000333896 RPUSD2Q8IZ73 545 aaKnown RBP11.88□□□□□ -0.51
SPTBN1-201ENST00000333896 CWC25Q9NXE8 425 aaPredicted RBP11.88□□□□□ -0.51
SPTBN1-201ENST00000333896 CDKL5O76039 1030 aa11.88□□□□□ -0.51
SPTBN1-201ENST00000333896 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.88□□□□□ -0.51
SPTBN1-201ENST00000333896 SH2B1Q9NRF2 756 aaPredicted RBP11.88□□□□□ -0.51
SPTBN1-201ENST00000333896 CCDC158Q5M9N0 1113 aa11.88□□□□□ -0.51
SPTBN1-201ENST00000333896 CTNNA2P26232 953 aa11.88□□□□□ -0.51
SPTBN1-201ENST00000333896 TPD52P55327 224 aaPredicted RBP11.88□□□□□ -0.51
SPTBN1-201ENST00000333896 GOLGA5Q8TBA6 731 aa11.88□□□□□ -0.51
SPTBN1-201ENST00000333896 TBC1D2BQ9UPU7 963 aa11.88□□□□□ -0.51
SPTBN1-201ENST00000333896 LARP1BQ659C4 914 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-201ENST00000333896 GGT6Q6P531 493 aa11.87□□□□□ -0.51
SPTBN1-201ENST00000333896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPTBN1-201ENST00000333896 ZNF428Q96B54 188 aa11.87□□□□□ -0.51
SPTBN1-201ENST00000333896 CFAP65Q6ZU64 1925 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-201ENST00000333896 TSNARE1Q96NA8 513 aa11.87□□□□□ -0.51
SPTBN1-201ENST00000333896 ELP1O95163 1332 aa11.87□□□□□ -0.51
SPTBN1-201ENST00000333896 PDZRN3Q9UPQ7 1066 aa11.87□□□□□ -0.51
SPTBN1-201ENST00000333896 CCDC69A6NI79 296 aa11.87□□□□□ -0.51
SPTBN1-201ENST00000333896 CCDC174Q6PII3 467 aa11.87□□□□□ -0.51
SPTBN1-201ENST00000333896 CCDC40Q4G0X9 1142 aa11.87□□□□□ -0.51
SPTBN1-201ENST00000333896 TRIM22Q8IYM9 498 aa11.87□□□□□ -0.51
SPTBN1-201ENST00000333896 CEP104O60308 925 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 BMP2KQ9NSY1 1161 aaPredicted RBP11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 PDE1CQ14123 709 aaPredicted RBP11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 VPS36Q86VN1 386 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 TBC1D2Q9BYX2 928 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 MAP3K9P80192 1104 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 GBP7Q8N8V2 638 aaPredicted RBP11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 SREK1Q8WXA9 508 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 KRT32Q14532 448 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 CAMK4Q16566 473 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 TOP2AP11388 1531 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 SOGA1O94964 1423 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 RIC3Q7Z5B4 369 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 VPS18Q9P253 973 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 IKBKGQ9Y6K9 419 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 AFAP1L1Q8TED9 768 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 NUP155O75694 1391 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 PABPN1LA6NDY0 278 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 CASTP20810 708 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 MCM6Q14566 821 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 TBC1D32Q96NH3 1257 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 ANAPC4Q9UJX5 808 aa11.86□□□□□ -0.51
SPTBN1-201ENST00000333896 CCDC88BA6NC98 1476 aa11.85□□□□□ -0.51
SPTBN1-201ENST00000333896 MRPS9P82933 396 aaKnown RBP11.85□□□□□ -0.51
SPTBN1-201ENST00000333896 DNAI2Q9GZS0 605 aa11.85□□□□□ -0.51
SPTBN1-201ENST00000333896 NUTM2DQ5VT03 806 aaPredicted RBP11.85□□□□□ -0.51
SPTBN1-201ENST00000333896 CACNA2D4Q7Z3S7 1137 aa11.85□□□□□ -0.51
SPTBN1-201ENST00000333896 NUCKS1Q9H1E3 243 aaKnown RBP11.85□□□□□ -0.51
SPTBN1-201ENST00000333896 PANK3Q9H999 370 aa11.85□□□□□ -0.51
SPTBN1-201ENST00000333896 WIZO95785 1651 aa11.85□□□□□ -0.51
SPTBN1-201ENST00000333896 EFCAB13Q8IY85 973 aa11.85□□□□□ -0.51
SPTBN1-201ENST00000333896 RABGAP1Q9Y3P9 1069 aa11.85□□□□□ -0.51
SPTBN1-201ENST00000333896 ARL1P40616 181 aaPredicted RBP11.85□□□□□ -0.51
SPTBN1-201ENST00000333896 BAG4O95429 457 aaKnown RBP11.85□□□□□ -0.51
SPTBN1-201ENST00000333896 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.85□□□□□ -0.51
SPTBN1-201ENST00000333896 ERICH3Q5RHP9 1530 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 PANK1Q8TE04 598 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 WHAMMQ8TF30 809 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms