RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 VSIG10Q8N0Z9 540 aa23.92■■□□□ 1.42
EXOSC3-201ENST00000327304 FRAT1Q92837 279 aaPredicted RBP23.92■■□□□ 1.42
EXOSC3-201ENST00000327304 BRPF1P55201 1214 aaPredicted RBP23.91■■□□□ 1.42
EXOSC3-201ENST00000327304 STK31Q9BXU1 1019 aa23.91■■□□□ 1.42
EXOSC3-201ENST00000327304 CHPF2Q9P2E5 772 aa23.91■■□□□ 1.42
EXOSC3-201ENST00000327304 TJP1Q07157 1748 aa23.91■■□□□ 1.42
EXOSC3-201ENST00000327304 SLC4A2P04920 1241 aa23.91■■□□□ 1.42
EXOSC3-201ENST00000327304 DNAJC10Q8IXB1 793 aa23.91■■□□□ 1.42
EXOSC3-201ENST00000327304 NOB1Q9ULX3 412 aaKnown RBP23.9■■□□□ 1.42
EXOSC3-201ENST00000327304 LOC102724428A0A0B4J2F2 783 aa23.89■■□□□ 1.42
EXOSC3-201ENST00000327304 SIK1P57059 783 aa23.89■■□□□ 1.42
EXOSC3-201ENST00000327304 KIF16BQ96L93 1317 aa23.89■■□□□ 1.42
EXOSC3-201ENST00000327304 ANXA1P04083 346 aa23.89■■□□□ 1.41
EXOSC3-201ENST00000327304 PROSER3Q2NL68 480 aa23.89■■□□□ 1.41
EXOSC3-201ENST00000327304 G2E3Q7L622 706 aa23.89■■□□□ 1.41
EXOSC3-201ENST00000327304 CHMP4AQ9BY43 222 aa23.89■■□□□ 1.41
EXOSC3-201ENST00000327304 TSHZ2Q9NRE2 1034 aa23.87■■□□□ 1.41
EXOSC3-201ENST00000327304 TNNQ9UQP3 1299 aa23.87■■□□□ 1.41
EXOSC3-201ENST00000327304 MS4A1P11836 297 aa23.87■■□□□ 1.41
EXOSC3-201ENST00000327304 PDIA6Q15084 440 aa23.87■■□□□ 1.41
EXOSC3-201ENST00000327304 TEX13AQ9BXU3 409 aaPredicted RBP23.87■■□□□ 1.41
EXOSC3-201ENST00000327304 DBF4Q9UBU7 674 aaPredicted RBP23.87■■□□□ 1.41
EXOSC3-201ENST00000327304 CICQ96RK0 1608 aaPredicted RBP23.86■■□□□ 1.41
EXOSC3-201ENST00000327304 ATP6V1AP38606 617 aa23.86■■□□□ 1.41
EXOSC3-201ENST00000327304 PIP4K2AP48426 406 aaPredicted RBP23.86■■□□□ 1.41
EXOSC3-201ENST00000327304 ITPK1Q13572 414 aa23.86■■□□□ 1.41
EXOSC3-201ENST00000327304 AAMPQ13685 434 aa23.86■■□□□ 1.41
EXOSC3-201ENST00000327304 CACNA1FO60840 1977 aa23.85■■□□□ 1.41
EXOSC3-201ENST00000327304 LY75O60449 1722 aa23.85■■□□□ 1.41
EXOSC3-201ENST00000327304 ZKSCAN2Q63HK3 967 aa23.85■■□□□ 1.41
EXOSC3-201ENST00000327304 DDX21Q9NR30 783 aaKnown RBP eCLIP23.85■■□□□ 1.41
EXOSC3-201ENST00000327304 ZNF831Q5JPB2 1677 aa23.85■■□□□ 1.41
EXOSC3-201ENST00000327304 A1BGP04217 495 aa23.84■■□□□ 1.41
EXOSC3-201ENST00000327304 CYP19A1P11511 503 aaPredicted RBP23.84■■□□□ 1.41
EXOSC3-201ENST00000327304 KCNQ4P56696 695 aa23.84■■□□□ 1.41
EXOSC3-201ENST00000327304 PHAXQ9H814 394 aaKnown RBP23.84■■□□□ 1.41
EXOSC3-201ENST00000327304 NBPF26B4DH59 902 aa23.83■■□□□ 1.41
EXOSC3-201ENST00000327304 STARD3NLO95772 234 aa23.83■■□□□ 1.41
EXOSC3-201ENST00000327304 TRIM27P14373 513 aa23.83■■□□□ 1.41
EXOSC3-201ENST00000327304 NBPF14Q5TI25 921 aa23.83■■□□□ 1.41
EXOSC3-201ENST00000327304 NBPF10Q6P3W6 841 aaKnown RBP23.83■■□□□ 1.41
EXOSC3-201ENST00000327304 ATF7IPQ6VMQ6 1270 aa23.83■■□□□ 1.41
EXOSC3-201ENST00000327304 NBPF15Q8N660 670 aa23.83■■□□□ 1.41
EXOSC3-201ENST00000327304 IPO8O15397 1037 aaKnown RBP23.82■■□□□ 1.4
EXOSC3-201ENST00000327304 MYL6BP14649 208 aa23.82■■□□□ 1.4
EXOSC3-201ENST00000327304 FLIIQ13045 1269 aa23.82■■□□□ 1.4
EXOSC3-201ENST00000327304 TNS1Q9HBL0 1735 aaKnown RBP23.82■■□□□ 1.4
EXOSC3-201ENST00000327304 ERBB4Q15303 1308 aa23.82■■□□□ 1.4
EXOSC3-201ENST00000327304 LRP10Q7Z4F1 713 aa23.81■■□□□ 1.4
EXOSC3-201ENST00000327304 PANK1Q8TE04 598 aa23.81■■□□□ 1.4
EXOSC3-201ENST00000327304 ARHGAP45Q92619 1136 aa23.81■■□□□ 1.4
EXOSC3-201ENST00000327304 CLUAP1Q96AJ1 413 aa23.81■■□□□ 1.4
EXOSC3-201ENST00000327304 HYPKQ9NX55 129 aa23.81■■□□□ 1.4
EXOSC3-201ENST00000327304 COL5A3P25940 1745 aaPredicted RBP23.81■■□□□ 1.4
EXOSC3-201ENST00000327304 RLBP1P12271 317 aa23.8■■□□□ 1.4
EXOSC3-201ENST00000327304 CCNL1Q9UK58 526 aaPredicted RBP23.8■■□□□ 1.4
EXOSC3-201ENST00000327304 PTPRCP08575 1304 aa23.8■■□□□ 1.4
EXOSC3-201ENST00000327304 LINC00116Q8NCU8 138 aa23.79■■□□□ 1.4
EXOSC3-201ENST00000327304 COG6Q9Y2V7 657 aa23.79■■□□□ 1.4
EXOSC3-201ENST00000327304 APBA3O96018 575 aa23.78■■□□□ 1.4
EXOSC3-201ENST00000327304 FKBP5Q13451 457 aaPredicted RBP23.78■■□□□ 1.4
EXOSC3-201ENST00000327304 API5Q9BZZ5 524 aaKnown RBP23.78■■□□□ 1.4
EXOSC3-201ENST00000327304 DZIP1LQ8IYY4 767 aaKnown RBP23.77■■□□□ 1.4
EXOSC3-201ENST00000327304 ZBTB1Q9Y2K1 713 aa23.77■■□□□ 1.4
EXOSC3-201ENST00000327304 KDM2BQ8NHM5 1336 aa23.77■■□□□ 1.4
EXOSC3-201ENST00000327304 CRKLP46109 303 aaKnown RBP23.77■■□□□ 1.4
EXOSC3-201ENST00000327304 RREB1Q92766 1687 aa23.77■■□□□ 1.4
EXOSC3-201ENST00000327304 AIMP1Q12904 312 aaKnown RBP23.76■■□□□ 1.39
EXOSC3-201ENST00000327304 INTS5Q6P9B9 1019 aaKnown RBP23.76■■□□□ 1.39
EXOSC3-201ENST00000327304 CENPQQ7L2Z9 268 aaPredicted RBP23.76■■□□□ 1.39
EXOSC3-201ENST00000327304 FTSJ3Q8IY81 847 aaKnown RBP23.76■■□□□ 1.39
EXOSC3-201ENST00000327304 XAGE3Q8WTP9 111 aa23.76■■□□□ 1.39
EXOSC3-201ENST00000327304 CCDC87Q9NVE4 849 aa23.76■■□□□ 1.39
EXOSC3-201ENST00000327304 MYH14Q7Z406 1995 aaKnown RBP23.76■■□□□ 1.39
EXOSC3-201ENST00000327304 F6X3S4 739 aa23.75■■□□□ 1.39
EXOSC3-201ENST00000327304 LRRC4BQ9NT99 713 aa23.75■■□□□ 1.39
EXOSC3-201ENST00000327304 ABCC4O15439 1325 aa23.75■■□□□ 1.39
EXOSC3-201ENST00000327304 TAF1LQ8IZX4 1826 aa23.75■■□□□ 1.39
EXOSC3-201ENST00000327304 COPS6Q7L5N1 327 aa23.75■■□□□ 1.39
EXOSC3-201ENST00000327304 MVPQ14764 893 aaKnown RBP23.74■■□□□ 1.39
EXOSC3-201ENST00000327304 PLSCR1O15162 318 aa23.73■■□□□ 1.39
EXOSC3-201ENST00000327304 ADCY9O60503 1353 aa23.73■■□□□ 1.39
EXOSC3-201ENST00000327304 PROM2Q8N271 834 aa23.73■■□□□ 1.39
EXOSC3-201ENST00000327304 TMEM57Q8N5G2 664 aa23.73■■□□□ 1.39
EXOSC3-201ENST00000327304 ZNF330Q9Y3S2 320 aaPredicted RBP23.73■■□□□ 1.39
EXOSC3-201ENST00000327304 TXNRD1Q16881 649 aa23.72■■□□□ 1.39
EXOSC3-201ENST00000327304 CNTNAP4Q9C0A0 1308 aa23.72■■□□□ 1.39
EXOSC3-201ENST00000327304 PI4KAP2A4QPH2 592 aa23.71■■□□□ 1.39
EXOSC3-201ENST00000327304 SLC27A3Q5K4L6 730 aa23.71■■□□□ 1.39
EXOSC3-201ENST00000327304 TTLL7Q6ZT98 887 aa23.71■■□□□ 1.39
EXOSC3-201ENST00000327304 PI4KAP1Q8N8J0 262 aa23.71■■□□□ 1.39
EXOSC3-201ENST00000327304 IL6STP40189 918 aaPredicted RBP23.7■■□□□ 1.38
EXOSC3-201ENST00000327304 C4BP0C0L5 1744 aa23.7■■□□□ 1.38
EXOSC3-201ENST00000327304 RGPD3A6NKT7 1758 aaPredicted RBP23.69■■□□□ 1.38
EXOSC3-201ENST00000327304 RGPD4Q7Z3J3 1758 aa23.69■■□□□ 1.38
EXOSC3-201ENST00000327304 DDX58O95786 925 aaKnown RBP23.69■■□□□ 1.38
EXOSC3-201ENST00000327304 SLC4A10Q6U841 1118 aa23.69■■□□□ 1.38
EXOSC3-201ENST00000327304 KSR2Q6VAB6 950 aa23.69■■□□□ 1.38
EXOSC3-201ENST00000327304 EIF5P55010 431 aaKnown RBP23.68■■□□□ 1.38
EXOSC3-201ENST00000327304 RC3H1Q5TC82 1133 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms