RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 SRGAP3O43295 1099 aa14.65□□□□□ -0.06
FN1-201ENST00000323926 FIBPO43427 364 aa14.65□□□□□ -0.06
FN1-201ENST00000323926 CCDC183Q5T5S1 534 aa14.65□□□□□ -0.06
FN1-201ENST00000323926 PLB1Q6P1J6 1458 aa14.65□□□□□ -0.06
FN1-201ENST00000323926 TANGO6Q9C0B7 1094 aa14.65□□□□□ -0.06
FN1-201ENST00000323926 AACSQ86V21 672 aa14.65□□□□□ -0.06
FN1-201ENST00000323926 GGNBP2Q9H3C7 697 aa14.65□□□□□ -0.06
FN1-201ENST00000323926 PDRG1Q9NUG6 133 aa14.65□□□□□ -0.06
FN1-201ENST00000323926 RBM27Q9P2N5 1060 aaKnown RBP14.65□□□□□ -0.06
FN1-201ENST00000323926 CTCFLQ8NI51 663 aaPredicted RBP14.65□□□□□ -0.06
FN1-201ENST00000323926 B4DLN1 442 aa14.64□□□□□ -0.07
FN1-201ENST00000323926 RRP9O43818 475 aaKnown RBP14.64□□□□□ -0.07
FN1-201ENST00000323926 MRPL12P52815 198 aaKnown RBP14.64□□□□□ -0.07
FN1-201ENST00000323926 EIF5P55010 431 aaKnown RBP14.64□□□□□ -0.07
FN1-201ENST00000323926 PRPHP41219 470 aa14.64□□□□□ -0.07
FN1-201ENST00000323926 ARHGEF12Q9NZN5 1544 aa14.64□□□□□ -0.07
FN1-201ENST00000323926 SULT6B1Q6IMI4 303 aa14.64□□□□□ -0.07
FN1-201ENST00000323926 ANKRD62A6NC57 917 aa14.64□□□□□ -0.07
FN1-201ENST00000323926 ALS2CR12Q96Q35 445 aa14.63□□□□□ -0.07
FN1-201ENST00000323926 SLC5A1P13866 664 aa14.63□□□□□ -0.07
FN1-201ENST00000323926 BAG4O95429 457 aaKnown RBP14.63□□□□□ -0.07
FN1-201ENST00000323926 BAG3O95817 575 aa14.63□□□□□ -0.07
FN1-201ENST00000323926 TMTC2Q8N394 836 aa14.63□□□□□ -0.07
FN1-201ENST00000323926 CATIPQ7Z7H3 387 aa14.62□□□□□ -0.07
FN1-201ENST00000323926 CD109Q6YHK3 1445 aa14.62□□□□□ -0.07
FN1-201ENST00000323926 RPRD2Q5VT52 1461 aaKnown RBP14.62□□□□□ -0.07
FN1-201ENST00000323926 ARHGEF11O15085 1522 aa14.62□□□□□ -0.07
FN1-201ENST00000323926 SHTN1A0MZ66 631 aa14.62□□□□□ -0.07
FN1-201ENST00000323926 PRPF40AO75400 957 aaKnown RBP14.62□□□□□ -0.07
FN1-201ENST00000323926 NAPBQ9H115 298 aa14.62□□□□□ -0.07
FN1-201ENST00000323926 GSTO1P78417 241 aa14.61□□□□□ -0.07
FN1-201ENST00000323926 ZSCAN16Q9H4T2 348 aaPredicted RBP14.61□□□□□ -0.07
FN1-201ENST00000323926 CERS3Q8IU89 383 aa14.61□□□□□ -0.07
FN1-201ENST00000323926 ATP2B2Q01814 1243 aa14.61□□□□□ -0.07
FN1-201ENST00000323926 FKBP4Q02790 459 aaKnown RBP eCLIP14.61□□□□□ -0.07
FN1-201ENST00000323926 TAF7Q15545 349 aaPredicted RBP14.61□□□□□ -0.07
FN1-201ENST00000323926 BRPF1P55201 1214 aaPredicted RBP14.61□□□□□ -0.07
FN1-201ENST00000323926 UBXN4Q92575 508 aa14.61□□□□□ -0.07
FN1-201ENST00000323926 CDC5LQ99459 802 aaKnown RBP14.61□□□□□ -0.07
FN1-201ENST00000323926 MATR3P43243 847 aaKnown RBP eCLIP14.61□□□□□ -0.079e-7■■□□□ 13.9
FN1-201ENST00000323926 CDK13Q14004 1512 aaKnown RBP14.61□□□□□ -0.07
FN1-201ENST00000323926 TUBBP07437 444 aa14.61□□□□□ -0.07
FN1-201ENST00000323926 PDE4BQ07343 736 aa14.61□□□□□ -0.07
FN1-201ENST00000323926 IFIT5Q13325 482 aaKnown RBP14.61□□□□□ -0.07
FN1-201ENST00000323926 RMND1Q9NWS8 449 aa14.61□□□□□ -0.07
FN1-201ENST00000323926 TSPOAP1O95153 1857 aa14.61□□□□□ -0.07
FN1-201ENST00000323926 SPATA24Q86W54 205 aa14.6□□□□□ -0.07
FN1-201ENST00000323926 NAIPQ13075 1403 aa14.6□□□□□ -0.07
FN1-201ENST00000323926 LDHCP07864 332 aa14.6□□□□□ -0.07
FN1-201ENST00000323926 PAFAH1B1P43034 410 aa14.6□□□□□ -0.07
FN1-201ENST00000323926 CTAGE1Q96RT6 745 aa14.6□□□□□ -0.07
FN1-201ENST00000323926 CEP128Q6ZU80 1094 aa14.6□□□□□ -0.07
FN1-201ENST00000323926 GRIPAP1Q4V328 841 aa14.6□□□□□ -0.07
FN1-201ENST00000323926 GOLGA4Q13439 2230 aaKnown RBP14.6□□□□□ -0.07
FN1-201ENST00000323926 RBM42Q9BTD8 480 aaKnown RBP14.6□□□□□ -0.07
FN1-201ENST00000323926 TMOD3Q9NYL9 352 aa14.6□□□□□ -0.07
FN1-201ENST00000323926 DYDC1Q8WWB3 177 aa14.6□□□□□ -0.07
FN1-201ENST00000323926 BACH2Q9BYV9 841 aa14.6□□□□□ -0.07
FN1-201ENST00000323926 DDX19AQ9NUU7 478 aaKnown RBP14.6□□□□□ -0.07
FN1-201ENST00000323926 RBM5P52756 815 aaKnown RBP eCLIP14.59□□□□□ -0.071e-19■■□□□ 13
FN1-201ENST00000323926 ZNF518AQ6AHZ1 1483 aa14.59□□□□□ -0.07
FN1-201ENST00000323926 POLR1AO95602 1720 aaPredicted RBP14.59□□□□□ -0.07
FN1-201ENST00000323926 TCP11L1Q9NUJ3 509 aa14.59□□□□□ -0.07
FN1-201ENST00000323926 PDZRN3Q9UPQ7 1066 aa14.59□□□□□ -0.07
FN1-201ENST00000323926 ANKRD36BQ8N2N9 1353 aa14.59□□□□□ -0.07
FN1-201ENST00000323926 FANCAO15360 1455 aa14.59□□□□□ -0.07
FN1-201ENST00000323926 DNMT1P26358 1616 aaKnown RBP14.59□□□□□ -0.07
FN1-201ENST00000323926 LRRFIP2Q9Y608 721 aaKnown RBP14.59□□□□□ -0.07
FN1-201ENST00000323926 GRPEL1Q9HAV7 217 aa14.59□□□□□ -0.07
FN1-201ENST00000323926 ZFYP08048 801 aaPredicted RBP14.59□□□□□ -0.07
FN1-201ENST00000323926 CALML4Q96GE6 196 aa14.59□□□□□ -0.07
FN1-201ENST00000323926 SMC1AQ14683 1233 aaKnown RBP14.59□□□□□ -0.07
FN1-201ENST00000323926 FILIP1Q7Z7B0 1213 aa14.59□□□□□ -0.07
FN1-201ENST00000323926 DBF4Q9UBU7 674 aaPredicted RBP14.59□□□□□ -0.07
FN1-201ENST00000323926 STMN4Q9H169 189 aaPredicted RBP14.58□□□□□ -0.07
FN1-201ENST00000323926 MYH10P35580 1976 aa14.58□□□□□ -0.07
FN1-201ENST00000323926 PIBF1Q8WXW3 757 aa14.58□□□□□ -0.08
FN1-201ENST00000323926 EVI5LQ96CN4 794 aa14.58□□□□□ -0.08
FN1-201ENST00000323926 EXOSC9Q06265 439 aaKnown RBP14.58□□□□□ -0.08
FN1-201ENST00000323926 PHF23Q9BUL5 403 aaPredicted RBP14.58□□□□□ -0.08
FN1-201ENST00000323926 KDM5BQ9UGL1 1544 aa14.58□□□□□ -0.08
FN1-201ENST00000323926 USP5P45974 858 aa14.58□□□□□ -0.08
FN1-201ENST00000323926 DZIP1Q86YF9 867 aaKnown RBP14.58□□□□□ -0.08
FN1-201ENST00000323926 MKNK2Q9HBH9 465 aa14.58□□□□□ -0.08
FN1-201ENST00000323926 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.58□□□□□ -0.081e-65■□□□□ 8.5
FN1-201ENST00000323926 V9GYY5 206 aaPredicted RBP14.58□□□□□ -0.08
FN1-201ENST00000323926 CACNA2D4Q7Z3S7 1137 aa14.58□□□□□ -0.08
FN1-201ENST00000323926 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.58□□□□□ -0.08
FN1-201ENST00000323926 PIK3R4Q99570 1358 aa14.58□□□□□ -0.08
FN1-201ENST00000323926 DENND4BO75064 1496 aaPredicted RBP14.58□□□□□ -0.08
FN1-201ENST00000323926 TMPOP42166 694 aaKnown RBP14.58□□□□□ -0.08
FN1-201ENST00000323926 C8orf76Q96K31 380 aa14.58□□□□□ -0.08
FN1-201ENST00000323926 ZFYVE9O95405 1425 aa14.57□□□□□ -0.08
FN1-201ENST00000323926 CFAP100Q494V2 611 aa14.57□□□□□ -0.08
FN1-201ENST00000323926 ERMNQ8TAM6 284 aa14.57□□□□□ -0.08
FN1-201ENST00000323926 METTL24Q5JXM2 366 aa14.57□□□□□ -0.08
FN1-201ENST00000323926 FERMT2Q96AC1 680 aa14.57□□□□□ -0.08
FN1-201ENST00000323926 TMCO3Q6UWJ1 677 aa14.57□□□□□ -0.08
FN1-201ENST00000323926 APBB1IPQ7Z5R6 666 aaPredicted RBP14.57□□□□□ -0.08
FN1-201ENST00000323926 MAST1Q9Y2H9 1570 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms