RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 DAAM2Q86T65 1068 aa19.46■□□□□ 0.71
SMCHD1-201ENST00000320876 USP25Q9UHP3 1055 aa19.46■□□□□ 0.71
SMCHD1-201ENST00000320876 GLRX3O76003 335 aaKnown RBP19.46■□□□□ 0.71
SMCHD1-201ENST00000320876 TDRD12Q587J7 1177 aaKnown RBP19.46■□□□□ 0.71
SMCHD1-201ENST00000320876 TNPO1Q92973 898 aaKnown RBP19.46■□□□□ 0.71
SMCHD1-201ENST00000320876 TRERF1Q96PN7 1200 aa19.46■□□□□ 0.71
SMCHD1-201ENST00000320876 KIF1BPQ96EK5 621 aa19.46■□□□□ 0.71
SMCHD1-201ENST00000320876 DHX29Q7Z478 1369 aaKnown RBP19.46■□□□□ 0.71
SMCHD1-201ENST00000320876 FAM177BA6PVY3 158 aa19.46■□□□□ 0.7
SMCHD1-201ENST00000320876 MYL6BP14649 208 aa19.46■□□□□ 0.7
SMCHD1-201ENST00000320876 CABP4P57796 275 aa19.46■□□□□ 0.7
SMCHD1-201ENST00000320876 HOMER2Q9NSB8 354 aa19.45■□□□□ 0.7
SMCHD1-201ENST00000320876 STMN4Q9H169 189 aaPredicted RBP19.45■□□□□ 0.7
SMCHD1-201ENST00000320876 RBM5P52756 815 aaKnown RBP eCLIP19.45■□□□□ 0.7
SMCHD1-201ENST00000320876 SPDYE4A6NLX3 237 aa19.45■□□□□ 0.7
SMCHD1-201ENST00000320876 KLHL34Q8N239 644 aa19.45■□□□□ 0.7
SMCHD1-201ENST00000320876 FERMT1Q9BQL6 677 aa19.45■□□□□ 0.7
SMCHD1-201ENST00000320876 TIAM1Q13009 1591 aa19.45■□□□□ 0.7
SMCHD1-201ENST00000320876 UVSSAQ2YD98 709 aa19.45■□□□□ 0.7
SMCHD1-201ENST00000320876 TATP17735 454 aaPredicted RBP19.45■□□□□ 0.7
SMCHD1-201ENST00000320876 DNA2P51530 1060 aa19.45■□□□□ 0.7
SMCHD1-201ENST00000320876 UBE2HP62256 183 aa19.45■□□□□ 0.7
SMCHD1-201ENST00000320876 KANK3Q6NY19 840 aa19.44■□□□□ 0.7
SMCHD1-201ENST00000320876 A0A087WZG4 1122 aa19.44■□□□□ 0.7
SMCHD1-201ENST00000320876 AKAP2Q9Y2D5 859 aa19.44■□□□□ 0.7
SMCHD1-201ENST00000320876 USP5P45974 858 aa19.44■□□□□ 0.7
SMCHD1-201ENST00000320876 RBM25P49756 843 aaKnown RBP19.44■□□□□ 0.7
SMCHD1-201ENST00000320876 TUBB4BP68371 445 aa19.44■□□□□ 0.7
SMCHD1-201ENST00000320876 CCDC155Q8N6L0 562 aa19.44■□□□□ 0.7
SMCHD1-201ENST00000320876 KIAA1107Q9UPP5 1409 aa19.44■□□□□ 0.7
SMCHD1-201ENST00000320876 TSNARE1Q96NA8 513 aa19.44■□□□□ 0.7
SMCHD1-201ENST00000320876 CEP126Q9P2H0 1117 aa19.44■□□□□ 0.7
SMCHD1-201ENST00000320876 BTBD11A6QL63 1104 aa19.44■□□□□ 0.7
SMCHD1-201ENST00000320876 CKAP2LQ8IYA6 745 aa19.44■□□□□ 0.7
SMCHD1-201ENST00000320876 LIMCH1Q9UPQ0 1083 aa19.44■□□□□ 0.7
SMCHD1-201ENST00000320876 FERMT3Q86UX7 667 aa19.43■□□□□ 0.7
SMCHD1-201ENST00000320876 RBM42Q9BTD8 480 aaKnown RBP19.43■□□□□ 0.7
SMCHD1-201ENST00000320876 FAM135AQ9P2D6 1515 aa19.43■□□□□ 0.7
SMCHD1-201ENST00000320876 GOLIM4O00461 696 aa19.43■□□□□ 0.7
SMCHD1-201ENST00000320876 A0A1W2PRG0 241 aa19.43■□□□□ 0.7
SMCHD1-201ENST00000320876 PLVAPQ9BX97 442 aa19.43■□□□□ 0.7
SMCHD1-201ENST00000320876 AMPD3Q01432 767 aa19.42■□□□□ 0.7
SMCHD1-201ENST00000320876 SULT6B1Q6IMI4 303 aa19.42■□□□□ 0.7
SMCHD1-201ENST00000320876 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
SMCHD1-201ENST00000320876 PPP1R14CQ8TAE6 165 aa19.42■□□□□ 0.7
SMCHD1-201ENST00000320876 SPG7Q9UQ90 795 aa19.42■□□□□ 0.7
SMCHD1-201ENST00000320876 FBF1Q8TES7 1133 aa19.42■□□□□ 0.7
SMCHD1-201ENST00000320876 CCDC12Q8WUD4 166 aaPredicted RBP19.42■□□□□ 0.7
SMCHD1-201ENST00000320876 SLC12A7Q9Y666 1083 aa19.42■□□□□ 0.7
SMCHD1-201ENST00000320876 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.41■□□□□ 0.7
SMCHD1-201ENST00000320876 RASAL2Q9UJF2 1139 aa19.41■□□□□ 0.7
SMCHD1-201ENST00000320876 V9GYY5 206 aaPredicted RBP19.41■□□□□ 0.7
SMCHD1-201ENST00000320876 TMEM57Q8N5G2 664 aa19.41■□□□□ 0.7
SMCHD1-201ENST00000320876 KIF4AO95239 1232 aa19.41■□□□□ 0.7
SMCHD1-201ENST00000320876 PRPF40BQ6NWY9 871 aaKnown RBP19.41■□□□□ 0.7
SMCHD1-201ENST00000320876 PIBF1Q8WXW3 757 aa19.41■□□□□ 0.7
SMCHD1-201ENST00000320876 SSRP1Q08945 709 aaKnown RBP19.41■□□□□ 0.7
SMCHD1-201ENST00000320876 C9orf84Q5VXU9 1444 aa19.41■□□□□ 0.7
SMCHD1-201ENST00000320876 IDH1O75874 414 aaKnown RBP19.41■□□□□ 0.7
SMCHD1-201ENST00000320876 UBA5Q9GZZ9 404 aa19.41■□□□□ 0.7
SMCHD1-201ENST00000320876 FSIP1Q8NA03 581 aa19.4■□□□□ 0.7
SMCHD1-201ENST00000320876 SEPT6Q14141 434 aa19.4■□□□□ 0.7
SMCHD1-201ENST00000320876 CCDC172P0C7W6 258 aa19.4■□□□□ 0.7
SMCHD1-201ENST00000320876 TMEM132EQ6IEE7 984 aa19.4■□□□□ 0.7
SMCHD1-201ENST00000320876 TMCO5BA8MYB1 307 aa19.4■□□□□ 0.7
SMCHD1-201ENST00000320876 CCDC6Q16204 474 aa19.4■□□□□ 0.7
SMCHD1-201ENST00000320876 ZFP91Q96JP5 570 aaPredicted RBP19.4■□□□□ 0.7
SMCHD1-201ENST00000320876 MTIF2P46199 727 aaKnown RBP19.4■□□□□ 0.7
SMCHD1-201ENST00000320876 PRPF4BQ13523 1007 aaKnown RBP19.4■□□□□ 0.7
SMCHD1-201ENST00000320876 CTAGE1Q96RT6 745 aa19.4■□□□□ 0.7
SMCHD1-201ENST00000320876 IGHMBP2P38935 993 aaKnown RBP19.4■□□□□ 0.7
SMCHD1-201ENST00000320876 DDX46Q7L014 1031 aaKnown RBP19.4■□□□□ 0.7
SMCHD1-201ENST00000320876 CTCFLQ8NI51 663 aaPredicted RBP19.39■□□□□ 0.7
SMCHD1-201ENST00000320876 TMX1Q9H3N1 280 aa19.39■□□□□ 0.7
SMCHD1-201ENST00000320876 CTAGE9A4FU28 777 aa19.39■□□□□ 0.69
SMCHD1-201ENST00000320876 TTC14Q96N46 770 aa19.39■□□□□ 0.69
SMCHD1-201ENST00000320876 ZMYND15Q9H091 742 aa19.39■□□□□ 0.69
SMCHD1-201ENST00000320876 KIAA0753Q2KHM9 967 aa19.39■□□□□ 0.69
SMCHD1-201ENST00000320876 GTPBP4Q9BZE4 634 aaKnown RBP19.39■□□□□ 0.69
SMCHD1-201ENST00000320876 NAPBQ9H115 298 aa19.39■□□□□ 0.69
SMCHD1-201ENST00000320876 OPA1O60313 960 aa19.39■□□□□ 0.69
SMCHD1-201ENST00000320876 ALDH1L2Q3SY69 923 aa19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 ZNF692Q9BU19 519 aaPredicted RBP19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 CFTRP13569 1480 aa19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 STX6O43752 255 aa19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 TUBB4AP04350 444 aa19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 GOLGA8BA8MQT2 603 aa19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 ZNF165P49910 485 aa19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 GNG11P61952 73 aa19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 IRX3P78415 501 aaPredicted RBP19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 SRRTQ9BXP5 876 aaKnown RBP19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 FERMT2Q96AC1 680 aa19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 ZNF530Q6P9A1 599 aaPredicted RBP19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 DAPK1P53355 1430 aa19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 ZSCAN23Q3MJ62 389 aa19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 COMMD10Q9Y6G5 202 aa19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 NOP2P46087 812 aaKnown RBP19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 IQCGQ9H095 443 aaKnown RBP19.38■□□□□ 0.69
SMCHD1-201ENST00000320876 CALML4Q96GE6 196 aa19.37■□□□□ 0.69
SMCHD1-201ENST00000320876 FCHSD2O94868 740 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms