RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 IRX6P78412 446 aaPredicted RBP34.99■■■■□ 3.19
CTDNEP1-201ENST00000318988 SBF2Q86WG5 1849 aa34.99■■■■□ 3.19
CTDNEP1-201ENST00000318988 DNAJC10Q8IXB1 793 aa34.98■■■■□ 3.19
CTDNEP1-201ENST00000318988 ARHGAP45Q92619 1136 aa34.98■■■■□ 3.19
CTDNEP1-201ENST00000318988 ATP6V1AP38606 617 aa34.97■■■■□ 3.19
CTDNEP1-201ENST00000318988 ATF7IPQ6VMQ6 1270 aa34.97■■■■□ 3.19
CTDNEP1-201ENST00000318988 DDX21Q9NR30 783 aaKnown RBP eCLIP34.97■■■■□ 3.19
CTDNEP1-201ENST00000318988 PTPRCP08575 1304 aa34.96■■■■□ 3.19
CTDNEP1-201ENST00000318988 HYPKQ9NX55 129 aa34.96■■■■□ 3.19
CTDNEP1-201ENST00000318988 BTAF1O14981 1849 aa34.96■■■■□ 3.19
CTDNEP1-201ENST00000318988 ERBB4Q15303 1308 aa34.96■■■■□ 3.19
CTDNEP1-201ENST00000318988 PDE3AQ14432 1141 aa34.96■■■■□ 3.19
CTDNEP1-201ENST00000318988 FTSJ3Q8IY81 847 aaKnown RBP34.96■■■■□ 3.19
CTDNEP1-201ENST00000318988 API5Q9BZZ5 524 aaKnown RBP34.96■■■■□ 3.19
CTDNEP1-201ENST00000318988 FKBP8Q14318 412 aa34.95■■■■□ 3.19
CTDNEP1-201ENST00000318988 SLC4A9Q96Q91 983 aa34.95■■■■□ 3.19
CTDNEP1-201ENST00000318988 LAMB4A4D0S4 1761 aa34.94■■■■□ 3.18
CTDNEP1-201ENST00000318988 FLIIQ13045 1269 aa34.93■■■■□ 3.18
CTDNEP1-201ENST00000318988 TRIM27P14373 513 aa34.92■■■■□ 3.18
CTDNEP1-201ENST00000318988 G2E3Q7L622 706 aa34.92■■■■□ 3.18
CTDNEP1-201ENST00000318988 DZIP1LQ8IYY4 767 aaKnown RBP34.92■■■■□ 3.18
CTDNEP1-201ENST00000318988 ANXA1P04083 346 aa34.91■■■■□ 3.18
CTDNEP1-201ENST00000318988 MYL6BP14649 208 aa34.91■■■■□ 3.18
CTDNEP1-201ENST00000318988 CLUAP1Q96AJ1 413 aa34.91■■■■□ 3.18
CTDNEP1-201ENST00000318988 FKBP5Q13451 457 aaPredicted RBP34.91■■■■□ 3.18
CTDNEP1-201ENST00000318988 PDIA6Q15084 440 aa34.9■■■■□ 3.18
CTDNEP1-201ENST00000318988 PROSER3Q2NL68 480 aa34.9■■■■□ 3.18
CTDNEP1-201ENST00000318988 C20orf194Q5TEA3 1177 aa34.9■■■■□ 3.18
CTDNEP1-201ENST00000318988 A1BGP04217 495 aa34.89■■■■□ 3.18
CTDNEP1-201ENST00000318988 PHAXQ9H814 394 aaKnown RBP34.89■■■■□ 3.18
CTDNEP1-201ENST00000318988 CACNA1FO60840 1977 aa34.89■■■■□ 3.18
CTDNEP1-201ENST00000318988 CYP19A1P11511 503 aaPredicted RBP34.88■■■■□ 3.17
CTDNEP1-201ENST00000318988 GTF3C3Q9Y5Q9 886 aa34.88■■■■□ 3.17
CTDNEP1-201ENST00000318988 PANK1Q8TE04 598 aa34.87■■■■□ 3.17
CTDNEP1-201ENST00000318988 CCNL1Q9UK58 526 aaPredicted RBP34.86■■■■□ 3.17
CTDNEP1-201ENST00000318988 DDX58O95786 925 aaKnown RBP34.86■■■■□ 3.17
CTDNEP1-201ENST00000318988 PIP4K2AP48426 406 aaPredicted RBP34.86■■■■□ 3.17
CTDNEP1-201ENST00000318988 TNNQ9UQP3 1299 aa34.86■■■■□ 3.17
CTDNEP1-201ENST00000318988 ITPK1Q13572 414 aa34.85■■■■□ 3.17
CTDNEP1-201ENST00000318988 NBPF26B4DH59 902 aa34.83■■■■□ 3.17
CTDNEP1-201ENST00000318988 AIMP1Q12904 312 aaKnown RBP34.83■■■■□ 3.17
CTDNEP1-201ENST00000318988 NBPF14Q5TI25 921 aa34.83■■■■□ 3.17
CTDNEP1-201ENST00000318988 NBPF10Q6P3W6 841 aaKnown RBP34.83■■■■□ 3.17
CTDNEP1-201ENST00000318988 NBPF15Q8N660 670 aa34.83■■■■□ 3.17
CTDNEP1-201ENST00000318988 TJP1Q07157 1748 aa34.83■■■■□ 3.17
CTDNEP1-201ENST00000318988 APBA3O96018 575 aa34.82■■■■□ 3.16
CTDNEP1-201ENST00000318988 NPM2Q86SE8 214 aaKnown RBP34.82■■■■□ 3.16
CTDNEP1-201ENST00000318988 CRBNQ96SW2 442 aa34.82■■■■□ 3.16
CTDNEP1-201ENST00000318988 RLBP1P12271 317 aa34.81■■■■□ 3.16
CTDNEP1-201ENST00000318988 XAGE3Q8WTP9 111 aa34.81■■■■□ 3.16
CTDNEP1-201ENST00000318988 CCDC87Q9NVE4 849 aa34.81■■■■□ 3.16
CTDNEP1-201ENST00000318988 COPS6Q7L5N1 327 aa34.81■■■■□ 3.16
CTDNEP1-201ENST00000318988 COG6Q9Y2V7 657 aa34.81■■■■□ 3.16
CTDNEP1-201ENST00000318988 ZNF831Q5JPB2 1677 aa34.81■■■■□ 3.16
CTDNEP1-201ENST00000318988 CRKLP46109 303 aaKnown RBP34.8■■■■□ 3.16
CTDNEP1-201ENST00000318988 ZNF330Q9Y3S2 320 aaPredicted RBP34.8■■■■□ 3.16
CTDNEP1-201ENST00000318988 ERICH6BQ5W0A0 696 aa34.79■■■■□ 3.16
CTDNEP1-201ENST00000318988 ABCC4O15439 1325 aa34.79■■■■□ 3.16
CTDNEP1-201ENST00000318988 CICQ96RK0 1608 aaPredicted RBP34.79■■■■□ 3.16
CTDNEP1-201ENST00000318988 HMGB2P26583 209 aaKnown RBP34.78■■■■□ 3.16
CTDNEP1-201ENST00000318988 KCNQ4P56696 695 aa34.78■■■■□ 3.16
CTDNEP1-201ENST00000318988 SLC4A10Q6U841 1118 aa34.78■■■■□ 3.16
CTDNEP1-201ENST00000318988 ITPRIPQ8IWB1 547 aa34.78■■■■□ 3.16
CTDNEP1-201ENST00000318988 F6X3S4 739 aa34.77■■■■□ 3.16
CTDNEP1-201ENST00000318988 SLC27A3Q5K4L6 730 aa34.77■■■■□ 3.16
CTDNEP1-201ENST00000318988 LRP10Q7Z4F1 713 aa34.77■■■■□ 3.16
CTDNEP1-201ENST00000318988 TMEM57Q8N5G2 664 aa34.77■■■■□ 3.16
CTDNEP1-201ENST00000318988 ZBTB1Q9Y2K1 713 aa34.77■■■■□ 3.16
CTDNEP1-201ENST00000318988 MVPQ14764 893 aaKnown RBP34.76■■■■□ 3.16
CTDNEP1-201ENST00000318988 LINC00116Q8NCU8 138 aa34.76■■■■□ 3.16
CTDNEP1-201ENST00000318988 EXOC6Q8TAG9 804 aa34.76■■■■□ 3.16
CTDNEP1-201ENST00000318988 PI4KAP2A4QPH2 592 aa34.76■■■■□ 3.15
CTDNEP1-201ENST00000318988 PLSCR1O15162 318 aa34.76■■■■□ 3.15
CTDNEP1-201ENST00000318988 KSR2Q6VAB6 950 aa34.76■■■■□ 3.15
CTDNEP1-201ENST00000318988 RIC3Q7Z5B4 369 aa34.76■■■■□ 3.15
CTDNEP1-201ENST00000318988 PI4KAP1Q8N8J0 262 aa34.76■■■■□ 3.15
CTDNEP1-201ENST00000318988 LY75O60449 1722 aa34.75■■■■□ 3.15
CTDNEP1-201ENST00000318988 IL6STP40189 918 aaPredicted RBP34.75■■■■□ 3.15
CTDNEP1-201ENST00000318988 INTS5Q6P9B9 1019 aaKnown RBP34.75■■■■□ 3.15
CTDNEP1-201ENST00000318988 DNAAF4Q8WXU2 420 aa34.74■■■■□ 3.15
CTDNEP1-201ENST00000318988 CCT4P50991 539 aaKnown RBP34.73■■■■□ 3.15
CTDNEP1-201ENST00000318988 SF3B2Q13435 895 aaKnown RBP34.73■■■■□ 3.15
CTDNEP1-201ENST00000318988 ANKRD13DQ6ZTN6 518 aa34.73■■■■□ 3.15
CTDNEP1-201ENST00000318988 EP400Q96L91 3159 aa34.73■■■■□ 3.15
CTDNEP1-201ENST00000318988 CNTNAP4Q9C0A0 1308 aa34.72■■■■□ 3.15
CTDNEP1-201ENST00000318988 ARXQ96QS3 562 aa34.72■■■■□ 3.15
CTDNEP1-201ENST00000318988 DDX19BQ9UMR2 479 aa34.72■■■■□ 3.15
CTDNEP1-201ENST00000318988 MAP3K2Q9Y2U5 619 aa34.72■■■■□ 3.15
CTDNEP1-201ENST00000318988 RC3H1Q5TC82 1133 aaKnown RBP34.71■■■■□ 3.15
CTDNEP1-201ENST00000318988 INTS3Q68E01 1043 aaKnown RBP34.71■■■■□ 3.15
CTDNEP1-201ENST00000318988 KIF6Q6ZMV9 814 aa34.71■■■■□ 3.15
CTDNEP1-201ENST00000318988 TXNRD1Q16881 649 aa34.71■■■■□ 3.15
CTDNEP1-201ENST00000318988 CHMP4BQ9H444 224 aaKnown RBP34.71■■■■□ 3.15
CTDNEP1-201ENST00000318988 PLBD2Q8NHP8 589 aa34.7■■■■□ 3.14
CTDNEP1-201ENST00000318988 ADCY9O60503 1353 aa34.69■■■■□ 3.14
CTDNEP1-201ENST00000318988 COL5A3P25940 1745 aaPredicted RBP34.68■■■■□ 3.14
CTDNEP1-201ENST00000318988 TTLL7Q6ZT98 887 aa34.68■■■■□ 3.14
CTDNEP1-201ENST00000318988 LRRC4BQ9NT99 713 aa34.67■■■■□ 3.14
CTDNEP1-201ENST00000318988 PXDNLA1KZ92 1463 aa34.67■■■■□ 3.14
CTDNEP1-201ENST00000318988 EIF5P55010 431 aaKnown RBP34.66■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms