RNA–Protein interactions for RNA: ENST00000318524.6

NFX1-201, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best) BASIC

Gene NFX1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-201ENST00000318524 NUTM1Q86Y26 1132 aa8.04□□□□□ -1.12
NFX1-201ENST00000318524 ZNF219Q9P2Y4 722 aaPredicted RBP8.04□□□□□ -1.12
NFX1-201ENST00000318524 CRB1P82279 1406 aa8.04□□□□□ -1.12
NFX1-201ENST00000318524 SNAP23O00161 211 aa8.04□□□□□ -1.12
NFX1-201ENST00000318524 MSL1Q68DK7 614 aa8.04□□□□□ -1.12
NFX1-201ENST00000318524 CNKSR2Q8WXI2 1034 aa8.04□□□□□ -1.12
NFX1-201ENST00000318524 SRGAP3O43295 1099 aa8.04□□□□□ -1.12
NFX1-201ENST00000318524 UBTFL1P0CB47 393 aaPredicted RBP8.04□□□□□ -1.12
NFX1-201ENST00000318524 GTF2E1P29083 439 aaPredicted RBP8.04□□□□□ -1.12
NFX1-201ENST00000318524 SLC51AQ86UW1 340 aa8.04□□□□□ -1.12
NFX1-201ENST00000318524 ZNF594Q96JF6 807 aaPredicted RBP8.04□□□□□ -1.12
NFX1-201ENST00000318524 DDX19BQ9UMR2 479 aa8.04□□□□□ -1.12
NFX1-201ENST00000318524 KDM6AO15550 1401 aaPredicted RBP8.04□□□□□ -1.12
NFX1-201ENST00000318524 NRKQ7Z2Y5 1582 aa8.03□□□□□ -1.12
NFX1-201ENST00000318524 NBPF26B4DH59 902 aa8.03□□□□□ -1.12
NFX1-201ENST00000318524 SURF6O75683 361 aaKnown RBP8.03□□□□□ -1.12
NFX1-201ENST00000318524 NBPF14Q5TI25 921 aa8.03□□□□□ -1.12
NFX1-201ENST00000318524 NBPF10Q6P3W6 841 aaKnown RBP8.03□□□□□ -1.12
NFX1-201ENST00000318524 NBPF15Q8N660 670 aa8.03□□□□□ -1.12
NFX1-201ENST00000318524 SLC4A9Q96Q91 983 aa8.03□□□□□ -1.12
NFX1-201ENST00000318524 ATG3Q9NT62 314 aa8.03□□□□□ -1.12
NFX1-201ENST00000318524 SNRPA1P09661 255 aaKnown RBP8.03□□□□□ -1.12
NFX1-201ENST00000318524 DNAAF4Q8WXU2 420 aa8.03□□□□□ -1.12
NFX1-201ENST00000318524 SRCIN1Q9C0H9 1055 aa8.03□□□□□ -1.12
NFX1-201ENST00000318524 SRP68Q9UHB9 627 aaKnown RBP8.03□□□□□ -1.12
NFX1-201ENST00000318524 HLFQ16534 295 aa8.03□□□□□ -1.12
NFX1-201ENST00000318524 API5Q9BZZ5 524 aaKnown RBP8.03□□□□□ -1.12
NFX1-201ENST00000318524 SPATA31A1Q5TZJ5 1347 aa8.02□□□□□ -1.13
NFX1-201ENST00000318524 A0A087WZG4 1122 aa8.02□□□□□ -1.13
NFX1-201ENST00000318524 HCLS1P14317 486 aaPredicted RBP8.02□□□□□ -1.13
NFX1-201ENST00000318524 MFAP1P55081 439 aaKnown RBP8.02□□□□□ -1.13
NFX1-201ENST00000318524 SIRT2Q8IXJ6 389 aa8.02□□□□□ -1.13
NFX1-201ENST00000318524 HELBQ8NG08 1087 aaPredicted RBP8.02□□□□□ -1.13
NFX1-201ENST00000318524 DBF4Q9UBU7 674 aaPredicted RBP8.02□□□□□ -1.13
NFX1-201ENST00000318524 ANKRD13DQ6ZTN6 518 aa8.02□□□□□ -1.13
NFX1-201ENST00000318524 NWD1Q149M9 1564 aa8.02□□□□□ -1.13
NFX1-201ENST00000318524 ZBTB7BO15156 539 aaPredicted RBP8.02□□□□□ -1.13
NFX1-201ENST00000318524 SEC24BO95487 1268 aa8.02□□□□□ -1.13
NFX1-201ENST00000318524 PDE3AQ14432 1141 aa8.02□□□□□ -1.13
NFX1-201ENST00000318524 FAM161AQ3B820 660 aa8.02□□□□□ -1.13
NFX1-201ENST00000318524 TPRNQ4KMQ1 711 aa8.02□□□□□ -1.13
NFX1-201ENST00000318524 NOL8Q76FK4 1167 aaKnown RBP8.02□□□□□ -1.13
NFX1-201ENST00000318524 JAG2Q9Y219 1238 aa8.02□□□□□ -1.13
NFX1-201ENST00000318524 TRIM6-TRIM34B2RNG4 842 aa8.01□□□□□ -1.13
NFX1-201ENST00000318524 GNPATO15228 680 aa8.01□□□□□ -1.13
NFX1-201ENST00000318524 AMIGO3Q86WK7 504 aa8.01□□□□□ -1.13
NFX1-201ENST00000318524 RILPL2Q969X0 211 aa8.01□□□□□ -1.13
NFX1-201ENST00000318524 GJD4Q96KN9 370 aaPredicted RBP8.01□□□□□ -1.13
NFX1-201ENST00000318524 RWDD1Q9H446 243 aaPredicted RBP8.01□□□□□ -1.13
NFX1-201ENST00000318524 DCCP43146 1447 aa8.01□□□□□ -1.13
NFX1-201ENST00000318524 ANKRD26Q9UPS8 1709 aa8.01□□□□□ -1.13
NFX1-201ENST00000318524 PPP1R42Q7Z4L9 355 aa8.01□□□□□ -1.13
NFX1-201ENST00000318524 IQSEC3Q9UPP2 1182 aaPredicted RBP8.01□□□□□ -1.13
NFX1-201ENST00000318524 RTL1A6NKG5 1358 aa8.01□□□□□ -1.13
NFX1-201ENST00000318524 IL16Q14005 1332 aa8.01□□□□□ -1.13
NFX1-201ENST00000318524 NEXNQ0ZGT2 675 aa8□□□□□ -1.13
NFX1-201ENST00000318524 EPHA10Q5JZY3 1008 aa8□□□□□ -1.13
NFX1-201ENST00000318524 DEFB132Q7Z7B7 95 aa8□□□□□ -1.13
NFX1-201ENST00000318524 CCDC8Q9H0W5 538 aaPredicted RBP8□□□□□ -1.13
NFX1-201ENST00000318524 ZBTB40Q9NUA8 1239 aa8□□□□□ -1.13
NFX1-201ENST00000318524 RNF123Q5XPI4 1314 aa8□□□□□ -1.13
NFX1-201ENST00000318524 ITPK1Q13572 414 aa8□□□□□ -1.13
NFX1-201ENST00000318524 PIAS4Q8N2W9 510 aaPredicted RBP8□□□□□ -1.13
NFX1-201ENST00000318524 USP44Q9H0E7 712 aa8□□□□□ -1.13
NFX1-201ENST00000318524 LTBP4Q8N2S1 1624 aa8□□□□□ -1.13
NFX1-201ENST00000318524 JCADQ9P266 1359 aa8□□□□□ -1.13
NFX1-201ENST00000318524 LOC102724428A0A0B4J2F2 783 aa8□□□□□ -1.13
NFX1-201ENST00000318524 SIK1P57059 783 aa8□□□□□ -1.13
NFX1-201ENST00000318524 NEUROD6Q96NK8 337 aa8□□□□□ -1.13
NFX1-201ENST00000318524 PDE4AP27815 886 aa7.99□□□□□ -1.13
NFX1-201ENST00000318524 ALDH1L2Q3SY69 923 aa7.99□□□□□ -1.13
NFX1-201ENST00000318524 PHLPP1O60346 1717 aa7.99□□□□□ -1.13
NFX1-201ENST00000318524 NCOA3Q9Y6Q9 1424 aa7.99□□□□□ -1.13
NFX1-201ENST00000318524 HSP90AB1P08238 724 aaKnown RBP7.99□□□□□ -1.13
NFX1-201ENST00000318524 CHMP4CQ96CF2 233 aa7.99□□□□□ -1.13
NFX1-201ENST00000318524 BICC1Q9H694 974 aaKnown RBP7.99□□□□□ -1.13
NFX1-201ENST00000318524 CCNL1Q9UK58 526 aaPredicted RBP7.99□□□□□ -1.13
NFX1-201ENST00000318524 SPATA31A5Q5VU36 1347 aa7.99□□□□□ -1.13
NFX1-201ENST00000318524 SPATA31A7Q8IWB4 1347 aa7.99□□□□□ -1.13
NFX1-201ENST00000318524 CHGBP05060 677 aa7.99□□□□□ -1.13
NFX1-201ENST00000318524 TAF7LQ5H9L4 462 aa7.99□□□□□ -1.13
NFX1-201ENST00000318524 EDC3Q96F86 508 aaKnown RBP7.99□□□□□ -1.13
NFX1-201ENST00000318524 SUCLG2Q96I99 432 aa7.99□□□□□ -1.13
NFX1-201ENST00000318524 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.99□□□□□ -1.13
NFX1-201ENST00000318524 APBA3O96018 575 aa7.98□□□□□ -1.13
NFX1-201ENST00000318524 GNAI2P04899 355 aa7.98□□□□□ -1.13
NFX1-201ENST00000318524 IGKV5-2P06315 115 aa7.98□□□□□ -1.13
NFX1-201ENST00000318524 CRKLP46109 303 aaKnown RBP7.98□□□□□ -1.13
NFX1-201ENST00000318524 HSP90AB3PQ58FF7 597 aa7.98□□□□□ -1.13
NFX1-201ENST00000318524 POTEAQ6S8J7 498 aa7.98□□□□□ -1.13
NFX1-201ENST00000318524 DZIP3Q86Y13 1208 aaKnown RBP7.98□□□□□ -1.13
NFX1-201ENST00000318524 STK11IPQ8N1F8 1099 aa7.98□□□□□ -1.13
NFX1-201ENST00000318524 BCL11BQ9C0K0 894 aaPredicted RBP7.98□□□□□ -1.13
NFX1-201ENST00000318524 MARF1Q9Y4F3 1742 aaKnown RBP7.98□□□□□ -1.13
NFX1-201ENST00000318524 CENPFP49454 3210 aa7.98□□□□□ -1.13
NFX1-201ENST00000318524 WTIPA6NIX2 430 aaPredicted RBP7.98□□□□□ -1.13
NFX1-201ENST00000318524 PDIA6Q15084 440 aa7.98□□□□□ -1.13
NFX1-201ENST00000318524 SLFNL1Q499Z3 407 aa7.98□□□□□ -1.13
NFX1-201ENST00000318524 LMBR1LQ6UX01 489 aa7.98□□□□□ -1.13
NFX1-201ENST00000318524 CENPQQ7L2Z9 268 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms