RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 KIF2CQ99661 725 aa23.54■■□□□ 1.36
CD55-201ENST00000314754 SLC52A2Q9HAB3 445 aa23.54■■□□□ 1.36
CD55-201ENST00000314754 CASC1Q6TDU7 716 aa23.53■■□□□ 1.36
CD55-201ENST00000314754 IFNL2Q8IZJ0 200 aa23.53■■□□□ 1.36
CD55-201ENST00000314754 SALL3Q9BXA9 1300 aa23.53■■□□□ 1.36
CD55-201ENST00000314754 PKD1L3Q7Z443 1732 aa23.52■■□□□ 1.36
CD55-201ENST00000314754 ZNF335Q9H4Z2 1342 aaPredicted RBP23.52■■□□□ 1.36
CD55-201ENST00000314754 ZNF790Q6PG37 636 aa23.52■■□□□ 1.36
CD55-201ENST00000314754 SPRYD3Q8NCJ5 442 aa23.52■■□□□ 1.36
CD55-201ENST00000314754 HYPKQ9NX55 129 aa23.52■■□□□ 1.36
CD55-201ENST00000314754 FRAT2O75474 233 aaPredicted RBP23.51■■□□□ 1.35
CD55-201ENST00000314754 SLC39A6Q13433 755 aa23.51■■□□□ 1.35
CD55-201ENST00000314754 NBPF7P0C2Y1 421 aaPredicted RBP23.51■■□□□ 1.35
CD55-201ENST00000314754 POLA2Q14181 598 aa23.51■■□□□ 1.35
CD55-201ENST00000314754 KSR2Q6VAB6 950 aa23.5■■□□□ 1.35
CD55-201ENST00000314754 MRC1P22897 1456 aa23.5■■□□□ 1.35
CD55-201ENST00000314754 TSHZ3Q63HK5 1081 aa23.49■■□□□ 1.35
CD55-201ENST00000314754 PPP1R42Q7Z4L9 355 aa23.49■■□□□ 1.35
CD55-201ENST00000314754 ALDH1L1O75891 902 aa23.49■■□□□ 1.35
CD55-201ENST00000314754 DCAF5Q96JK2 942 aa23.49■■□□□ 1.35
CD55-201ENST00000314754 DDX21Q9NR30 783 aaKnown RBP eCLIP23.49■■□□□ 1.35
CD55-201ENST00000314754 MAP3K2Q9Y2U5 619 aa23.49■■□□□ 1.35
CD55-201ENST00000314754 SOS2Q07890 1332 aaPredicted RBP23.48■■□□□ 1.35
CD55-201ENST00000314754 MX1P20591 662 aa23.48■■□□□ 1.35
CD55-201ENST00000314754 SLAIN2Q9P270 581 aa23.48■■□□□ 1.35
CD55-201ENST00000314754 RAB11FIP3O75154 756 aa23.48■■□□□ 1.35
CD55-201ENST00000314754 NFATC2IPQ8NCF5 419 aa23.48■■□□□ 1.35
CD55-201ENST00000314754 CYP27B1O15528 508 aa23.47■■□□□ 1.35
CD55-201ENST00000314754 HSP90AB1P08238 724 aaKnown RBP23.47■■□□□ 1.35
CD55-201ENST00000314754 STAP2Q9UGK3 403 aa23.47■■□□□ 1.35
CD55-201ENST00000314754 ABCA3Q99758 1704 aa23.46■■□□□ 1.35
CD55-201ENST00000314754 SRGAP3O43295 1099 aa23.46■■□□□ 1.35
CD55-201ENST00000314754 USP26Q9BXU7 913 aa23.46■■□□□ 1.35
CD55-201ENST00000314754 DDX58O95786 925 aaKnown RBP23.45■■□□□ 1.35
CD55-201ENST00000314754 PDIA6Q15084 440 aa23.45■■□□□ 1.34
CD55-201ENST00000314754 PRDM11Q9NQV5 511 aa23.45■■□□□ 1.34
CD55-201ENST00000314754 AOX1Q06278 1338 aa23.45■■□□□ 1.34
CD55-201ENST00000314754 SURF6O75683 361 aaKnown RBP23.44■■□□□ 1.34
CD55-201ENST00000314754 REC8O95072 547 aa23.44■■□□□ 1.34
CD55-201ENST00000314754 HDAC5Q9UQL6 1122 aa23.44■■□□□ 1.34
CD55-201ENST00000314754 MTX1Q13505 466 aa23.44■■□□□ 1.34
CD55-201ENST00000314754 RBM42Q9BTD8 480 aaKnown RBP23.44■■□□□ 1.34
CD55-201ENST00000314754 CD2BP2O95400 341 aaKnown RBP23.43■■□□□ 1.34
CD55-201ENST00000314754 CHMP5Q9NZZ3 219 aa23.43■■□□□ 1.34
CD55-201ENST00000314754 WDR17Q8IZU2 1322 aa23.43■■□□□ 1.34
CD55-201ENST00000314754 PARP4Q9UKK3 1724 aaKnown RBP23.43■■□□□ 1.34
CD55-201ENST00000314754 LINS1Q8NG48 757 aa23.43■■□□□ 1.34
CD55-201ENST00000314754 C9orf78Q9NZ63 289 aaPredicted RBP23.43■■□□□ 1.34
CD55-201ENST00000314754 PRKCSHP14314 528 aaPredicted RBP23.42■■□□□ 1.34
CD55-201ENST00000314754 ZNF496Q96IT1 587 aaPredicted RBP23.42■■□□□ 1.34
CD55-201ENST00000314754 ERC2O15083 957 aa23.41■■□□□ 1.34
CD55-201ENST00000314754 CWF19L2Q2TBE0 894 aaKnown RBP23.41■■□□□ 1.34
CD55-201ENST00000314754 HSP90AB4PQ58FF6 505 aa23.41■■□□□ 1.34
CD55-201ENST00000314754 IL1RAPL2Q9NP60 686 aa23.41■■□□□ 1.34
CD55-201ENST00000314754 RABEP1Q15276 862 aa23.41■■□□□ 1.34
CD55-201ENST00000314754 TTC5Q8N0Z6 440 aa23.41■■□□□ 1.34
CD55-201ENST00000314754 RHPN1Q8TCX5 695 aa23.41■■□□□ 1.34
CD55-201ENST00000314754 KIF1BPQ96EK5 621 aa23.41■■□□□ 1.34
CD55-201ENST00000314754 AIMP1Q12904 312 aaKnown RBP23.4■■□□□ 1.34
CD55-201ENST00000314754 COL5A2P05997 1499 aaPredicted RBP23.39■■□□□ 1.34
CD55-201ENST00000314754 SNRPA1P09661 255 aaKnown RBP23.39■■□□□ 1.34
CD55-201ENST00000314754 GLI3P10071 1580 aa23.39■■□□□ 1.33
CD55-201ENST00000314754 K7ELQ4 463 aaPredicted RBP23.39■■□□□ 1.33
CD55-201ENST00000314754 DDIT3P35638 169 aa23.39■■□□□ 1.33
CD55-201ENST00000314754 UTYO14607 1347 aa23.39■■□□□ 1.33
CD55-201ENST00000314754 AK9Q5TCS8 1911 aa23.38■■□□□ 1.33
CD55-201ENST00000314754 FMNL2Q96PY5 1086 aa23.38■■□□□ 1.33
CD55-201ENST00000314754 GRM8O00222 908 aa23.37■■□□□ 1.33
CD55-201ENST00000314754 CABP4P57796 275 aa23.37■■□□□ 1.33
CD55-201ENST00000314754 TOM1L2Q6ZVM7 507 aa23.37■■□□□ 1.33
CD55-201ENST00000314754 PCDH11XQ9BZA7 1347 aa23.37■■□□□ 1.33
CD55-201ENST00000314754 PCDH11YQ9BZA8 1340 aa23.37■■□□□ 1.33
CD55-201ENST00000314754 MYL6BP14649 208 aa23.37■■□□□ 1.33
CD55-201ENST00000314754 LARP1Q6PKG0 1096 aaKnown RBP23.37■■□□□ 1.33
CD55-201ENST00000314754 GSE1Q14687 1217 aa23.36■■□□□ 1.33
CD55-201ENST00000314754 NUTM1Q86Y26 1132 aa23.36■■□□□ 1.33
CD55-201ENST00000314754 SHANK3Q9BYB0 1731 aa23.36■■□□□ 1.33
CD55-201ENST00000314754 PIP4K2AP48426 406 aaPredicted RBP23.36■■□□□ 1.33
CD55-201ENST00000314754 RIC3Q7Z5B4 369 aa23.36■■□□□ 1.33
CD55-201ENST00000314754 NHSL1Q5SYE7 1610 aa23.35■■□□□ 1.33
CD55-201ENST00000314754 TRIM6-TRIM34B2RNG4 842 aa23.35■■□□□ 1.33
CD55-201ENST00000314754 USP16Q9Y5T5 823 aa23.35■■□□□ 1.33
CD55-201ENST00000314754 ZCRB1Q8TBF4 217 aaKnown RBP23.35■■□□□ 1.33
CD55-201ENST00000314754 XAGE3Q8WTP9 111 aa23.35■■□□□ 1.33
CD55-201ENST00000314754 ESYT1Q9BSJ8 1104 aa23.35■■□□□ 1.33
CD55-201ENST00000314754 CIZ1Q9ULV3 898 aaPredicted RBP23.35■■□□□ 1.33
CD55-201ENST00000314754 NEXNQ0ZGT2 675 aa23.34■■□□□ 1.33
CD55-201ENST00000314754 LRP10Q7Z4F1 713 aa23.34■■□□□ 1.33
CD55-201ENST00000314754 UNC5CLQ8IV45 518 aa23.34■■□□□ 1.33
CD55-201ENST00000314754 RILPL2Q969X0 211 aa23.34■■□□□ 1.33
CD55-201ENST00000314754 LAMB4A4D0S4 1761 aa23.33■■□□□ 1.33
CD55-201ENST00000314754 CHMLP26374 656 aa23.33■■□□□ 1.33
CD55-201ENST00000314754 IGKV5-2P06315 115 aa23.33■■□□□ 1.33
CD55-201ENST00000314754 COPS6Q7L5N1 327 aa23.33■■□□□ 1.33
CD55-201ENST00000314754 CARD10Q9BWT7 1032 aa23.33■■□□□ 1.33
CD55-201ENST00000314754 HSP90AA1P07900 732 aaKnown RBP23.32■■□□□ 1.32
CD55-201ENST00000314754 OS9Q13438 667 aaPredicted RBP23.32■■□□□ 1.32
CD55-201ENST00000314754 PI4K2BQ8TCG2 481 aa23.32■■□□□ 1.32
CD55-201ENST00000314754 KAZALD1Q96I82 304 aa23.32■■□□□ 1.32
CD55-201ENST00000314754 METTL22Q9BUU2 404 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms