RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 KCPQ6ZWJ8 1503 aa31.64■■■□□ 2.66
CDPF1-201ENST00000314567 DDX19BQ9UMR2 479 aa31.64■■■□□ 2.66
CDPF1-201ENST00000314567 RXRBP28702 533 aa31.63■■■□□ 2.65
CDPF1-201ENST00000314567 HDGFL1Q5TGJ6 251 aa31.61■■■□□ 2.65
CDPF1-201ENST00000314567 FMNL2Q96PY5 1086 aa31.61■■■□□ 2.65
CDPF1-201ENST00000314567 KRT27Q7Z3Y8 459 aa31.59■■■□□ 2.65
CDPF1-201ENST00000314567 SOS1Q07889 1333 aaPredicted RBP31.59■■■□□ 2.65
CDPF1-201ENST00000314567 SLC4A2P04920 1241 aa31.58■■■□□ 2.65
CDPF1-201ENST00000314567 USP16Q9Y5T5 823 aa31.57■■■□□ 2.64
CDPF1-201ENST00000314567 ANXA1P04083 346 aa31.57■■■□□ 2.64
CDPF1-201ENST00000314567 CCDC30Q5VVM6 783 aa31.57■■■□□ 2.64
CDPF1-201ENST00000314567 ITPRIPQ8IWB1 547 aa31.57■■■□□ 2.64
CDPF1-201ENST00000314567 RBM42Q9BTD8 480 aaKnown RBP31.57■■■□□ 2.64
CDPF1-201ENST00000314567 RBM19Q9Y4C8 960 aaKnown RBP31.57■■■□□ 2.64
CDPF1-201ENST00000314567 RGS12O14924 1447 aa31.56■■■□□ 2.64
CDPF1-201ENST00000314567 SBF2Q86WG5 1849 aa31.56■■■□□ 2.64
CDPF1-201ENST00000314567 G2E3Q7L622 706 aa31.56■■■□□ 2.64
CDPF1-201ENST00000314567 TMEM57Q8N5G2 664 aa31.56■■■□□ 2.64
CDPF1-201ENST00000314567 API5Q9BZZ5 524 aaKnown RBP31.56■■■□□ 2.64
CDPF1-201ENST00000314567 HOXB7P09629 217 aa31.55■■■□□ 2.64
CDPF1-201ENST00000314567 SNRPA1P09661 255 aaKnown RBP31.55■■■□□ 2.64
CDPF1-201ENST00000314567 CHPF2Q9P2E5 772 aa31.55■■■□□ 2.64
CDPF1-201ENST00000314567 CHMP4BQ9H444 224 aaKnown RBP31.55■■■□□ 2.64
CDPF1-201ENST00000314567 SLC4A9Q96Q91 983 aa31.54■■■□□ 2.64
CDPF1-201ENST00000314567 ABCC4O15439 1325 aa31.53■■■□□ 2.64
CDPF1-201ENST00000314567 PIP4K2AP48426 406 aaPredicted RBP31.53■■■□□ 2.64
CDPF1-201ENST00000314567 PROSER3Q2NL68 480 aa31.52■■■□□ 2.64
CDPF1-201ENST00000314567 STK31Q9BXU1 1019 aa31.52■■■□□ 2.64
CDPF1-201ENST00000314567 NHSQ6T4R5 1651 aa31.52■■■□□ 2.64
CDPF1-201ENST00000314567 BTAF1O14981 1849 aa31.51■■■□□ 2.63
CDPF1-201ENST00000314567 PCDHB15Q9Y5E8 787 aa31.5■■■□□ 2.63
CDPF1-201ENST00000314567 IGHDP01880 384 aa31.5■■■□□ 2.63
CDPF1-201ENST00000314567 PHAXQ9H814 394 aaKnown RBP31.49■■■□□ 2.63
CDPF1-201ENST00000314567 LAMB4A4D0S4 1761 aa31.49■■■□□ 2.63
CDPF1-201ENST00000314567 PTPRCP08575 1304 aa31.49■■■□□ 2.63
CDPF1-201ENST00000314567 RWDD1Q9H446 243 aaPredicted RBP31.48■■■□□ 2.63
CDPF1-201ENST00000314567 CACNA1FO60840 1977 aa31.48■■■□□ 2.63
CDPF1-201ENST00000314567 DNAJC10Q8IXB1 793 aa31.48■■■□□ 2.63
CDPF1-201ENST00000314567 PALLDQ8WX93 1383 aa31.47■■■□□ 2.63
CDPF1-201ENST00000314567 PDIA6Q15084 440 aa31.46■■■□□ 2.63
CDPF1-201ENST00000314567 ZBTB40Q9NUA8 1239 aa31.46■■■□□ 2.63
CDPF1-201ENST00000314567 MYL6BP14649 208 aa31.45■■■□□ 2.63
CDPF1-201ENST00000314567 FAM196AQ6ZSG2 479 aa31.44■■■□□ 2.62
CDPF1-201ENST00000314567 KCNQ4P56696 695 aa31.44■■■□□ 2.62
CDPF1-201ENST00000314567 FLIIQ13045 1269 aa31.44■■■□□ 2.62
CDPF1-201ENST00000314567 DBF4Q9UBU7 674 aaPredicted RBP31.44■■■□□ 2.62
CDPF1-201ENST00000314567 A1BGP04217 495 aa31.43■■■□□ 2.62
CDPF1-201ENST00000314567 TJP1Q07157 1748 aa31.43■■■□□ 2.62
CDPF1-201ENST00000314567 TRIM37O94972 964 aa31.42■■■□□ 2.62
CDPF1-201ENST00000314567 LOC102724428A0A0B4J2F2 783 aa31.42■■■□□ 2.62
CDPF1-201ENST00000314567 SIK1P57059 783 aa31.42■■■□□ 2.62
CDPF1-201ENST00000314567 HDAC1Q13547 482 aaPredicted RBP31.41■■■□□ 2.62
CDPF1-201ENST00000314567 VSIG10Q8N0Z9 540 aa31.41■■■□□ 2.62
CDPF1-201ENST00000314567 NBPF26B4DH59 902 aa31.4■■■□□ 2.62
CDPF1-201ENST00000314567 F6X3S4 739 aa31.4■■■□□ 2.62
CDPF1-201ENST00000314567 NBPF14Q5TI25 921 aa31.4■■■□□ 2.62
CDPF1-201ENST00000314567 NBPF10Q6P3W6 841 aaKnown RBP31.4■■■□□ 2.62
CDPF1-201ENST00000314567 NBPF15Q8N660 670 aa31.4■■■□□ 2.62
CDPF1-201ENST00000314567 ATP6V1AP38606 617 aa31.4■■■□□ 2.62
CDPF1-201ENST00000314567 CHMP4AQ9BY43 222 aa31.4■■■□□ 2.62
CDPF1-201ENST00000314567 DDX21Q9NR30 783 aaKnown RBP eCLIP31.4■■■□□ 2.62
CDPF1-201ENST00000314567 FKBP5Q13451 457 aaPredicted RBP31.39■■■□□ 2.62
CDPF1-201ENST00000314567 ITPK1Q13572 414 aa31.39■■■□□ 2.62
CDPF1-201ENST00000314567 ZBTB7BO15156 539 aaPredicted RBP31.38■■■□□ 2.61
CDPF1-201ENST00000314567 SMARCC1Q92922 1105 aaPredicted RBP31.38■■■□□ 2.61
CDPF1-201ENST00000314567 BCL11BQ9C0K0 894 aaPredicted RBP31.38■■■□□ 2.61
CDPF1-201ENST00000314567 AIMP1Q12904 312 aaKnown RBP31.38■■■□□ 2.61
CDPF1-201ENST00000314567 INTS3Q68E01 1043 aaKnown RBP31.38■■■□□ 2.61
CDPF1-201ENST00000314567 LRP10Q7Z4F1 713 aa31.37■■■□□ 2.61
CDPF1-201ENST00000314567 CYP19A1P11511 503 aaPredicted RBP31.35■■■□□ 2.61
CDPF1-201ENST00000314567 HYPKQ9NX55 129 aa31.35■■■□□ 2.61
CDPF1-201ENST00000314567 SKAP1Q86WV1 359 aa31.33■■■□□ 2.61
CDPF1-201ENST00000314567 TEX13AQ9BXU3 409 aaPredicted RBP31.33■■■□□ 2.61
CDPF1-201ENST00000314567 XAGE3Q8WTP9 111 aa31.33■■■□□ 2.61
CDPF1-201ENST00000314567 STARD3NLO95772 234 aa31.32■■■□□ 2.6
CDPF1-201ENST00000314567 SLC4A10Q6U841 1118 aa31.32■■■□□ 2.6
CDPF1-201ENST00000314567 N4BP2Q86UW6 1770 aaPredicted RBP31.32■■■□□ 2.6
CDPF1-201ENST00000314567 COPS6Q7L5N1 327 aa31.31■■■□□ 2.6
CDPF1-201ENST00000314567 ZNF330Q9Y3S2 320 aaPredicted RBP31.31■■■□□ 2.6
CDPF1-201ENST00000314567 PI4KAP2A4QPH2 592 aa31.3■■■□□ 2.6
CDPF1-201ENST00000314567 PI4KAP1Q8N8J0 262 aa31.3■■■□□ 2.6
CDPF1-201ENST00000314567 ZBTB1Q9Y2K1 713 aa31.3■■■□□ 2.6
CDPF1-201ENST00000314567 LY75O60449 1722 aa31.3■■■□□ 2.6
CDPF1-201ENST00000314567 ADCY9O60503 1353 aa31.29■■■□□ 2.6
CDPF1-201ENST00000314567 PDE4AP27815 886 aa31.29■■■□□ 2.6
CDPF1-201ENST00000314567 MYH14Q7Z406 1995 aaKnown RBP31.29■■■□□ 2.6
CDPF1-201ENST00000314567 LINC00116Q8NCU8 138 aa31.28■■■□□ 2.6
CDPF1-201ENST00000314567 BACH2Q9BYV9 841 aa31.28■■■□□ 2.6
CDPF1-201ENST00000314567 RGS3P49796 1198 aa31.27■■■□□ 2.6
CDPF1-201ENST00000314567 COL5A3P25940 1745 aaPredicted RBP31.27■■■□□ 2.6
CDPF1-201ENST00000314567 ERBB4Q15303 1308 aa31.27■■■□□ 2.6
CDPF1-201ENST00000314567 CRKLP46109 303 aaKnown RBP31.27■■■□□ 2.6
CDPF1-201ENST00000314567 CCNL1Q9UK58 526 aaPredicted RBP31.27■■■□□ 2.6
CDPF1-201ENST00000314567 INTS5Q6P9B9 1019 aaKnown RBP31.26■■■□□ 2.59
CDPF1-201ENST00000314567 TTLL7Q6ZT98 887 aa31.26■■■□□ 2.59
CDPF1-201ENST00000314567 SMC5Q8IY18 1101 aa31.26■■■□□ 2.59
CDPF1-201ENST00000314567 PXDNLA1KZ92 1463 aa31.26■■■□□ 2.59
CDPF1-201ENST00000314567 CICQ96RK0 1608 aaPredicted RBP31.25■■■□□ 2.59
CDPF1-201ENST00000314567 PDZRN3Q9UPQ7 1066 aa31.25■■■□□ 2.59
CDPF1-201ENST00000314567 MAP3K2Q9Y2U5 619 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms