RNA–Protein interactions for RNA: ENST00000310931.8

HDLBP-201, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-201ENST00000310931 ROBO1Q9Y6N7 1651 aa11.41□□□□□ -0.58
HDLBP-201ENST00000310931 VGLL3A8MV65 326 aa11.41□□□□□ -0.58
HDLBP-201ENST00000310931 GTF2A1P52655 376 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-201ENST00000310931 NLRP2Q9NX02 1062 aa11.41□□□□□ -0.58
HDLBP-201ENST00000310931 PEAK1Q9H792 1746 aa11.4□□□□□ -0.58
HDLBP-201ENST00000310931 OVOS2A0A0G2JMS6 1433 aa11.4□□□□□ -0.58
HDLBP-201ENST00000310931 RGPD1P0DJD0 1748 aa11.4□□□□□ -0.58
HDLBP-201ENST00000310931 CLCN1P35523 988 aa11.4□□□□□ -0.58
HDLBP-201ENST00000310931 ZC3H6P61129 1189 aaKnown RBP11.4□□□□□ -0.58
HDLBP-201ENST00000310931 SF3A1Q15459 793 aaKnown RBP11.4□□□□□ -0.58
HDLBP-201ENST00000310931 C22orf23Q9BZE7 217 aa11.4□□□□□ -0.58
HDLBP-201ENST00000310931 MARF1Q9Y4F3 1742 aaKnown RBP11.4□□□□□ -0.58
HDLBP-201ENST00000310931 MAP3K5Q99683 1374 aa11.4□□□□□ -0.59
HDLBP-201ENST00000310931 MCM4P33991 863 aa11.4□□□□□ -0.59
HDLBP-201ENST00000310931 GORABQ5T7V8 394 aa11.4□□□□□ -0.59
HDLBP-201ENST00000310931 SASS6Q6UVJ0 657 aa11.4□□□□□ -0.59
HDLBP-201ENST00000310931 TRMT2AQ8IZ69 625 aaKnown RBP11.4□□□□□ -0.59
HDLBP-201ENST00000310931 DYDC1Q8WWB3 177 aa11.4□□□□□ -0.59
HDLBP-201ENST00000310931 CCDC34Q96HJ3 373 aa11.4□□□□□ -0.59
HDLBP-201ENST00000310931 ERBB3P21860 1342 aa11.39□□□□□ -0.59
HDLBP-201ENST00000310931 COL22A1Q8NFW1 1626 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-201ENST00000310931 AKAP4Q5JQC9 854 aa11.39□□□□□ -0.59
HDLBP-201ENST00000310931 RRP7AQ9Y3A4 280 aaKnown RBP11.39□□□□□ -0.59
HDLBP-201ENST00000310931 KIAA0754O94854 1291 aa11.38□□□□□ -0.59
HDLBP-201ENST00000310931 LETM1O95202 739 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-201ENST00000310931 JCADQ9P266 1359 aa11.38□□□□□ -0.59
HDLBP-201ENST00000310931 DUSP27Q5VZP5 1158 aa11.38□□□□□ -0.59
HDLBP-201ENST00000310931 KIAA0232Q92628 1395 aa11.38□□□□□ -0.59
HDLBP-201ENST00000310931 PHLPP1O60346 1717 aa11.38□□□□□ -0.59
HDLBP-201ENST00000310931 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
HDLBP-201ENST00000310931 HMMRO75330 724 aa11.38□□□□□ -0.59
HDLBP-201ENST00000310931 MEX3CQ5U5Q3 659 aaKnown RBP11.38□□□□□ -0.59
HDLBP-201ENST00000310931 PPP4R3BQ5MIZ7 849 aa11.38□□□□□ -0.59
HDLBP-201ENST00000310931 AXDND1Q5T1B0 1012 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-201ENST00000310931 SPATA31A6Q5VVP1 1343 aa11.38□□□□□ -0.59
HDLBP-201ENST00000310931 WDR17Q8IZU2 1322 aa11.38□□□□□ -0.59
HDLBP-201ENST00000310931 TRIM6-TRIM34B2RNG4 842 aa11.37□□□□□ -0.59
HDLBP-201ENST00000310931 COL14A1Q05707 1796 aaKnown RBP11.37□□□□□ -0.59
HDLBP-201ENST00000310931 ALDH1L2Q3SY69 923 aa11.37□□□□□ -0.59
HDLBP-201ENST00000310931 TOM1L2Q6ZVM7 507 aa11.37□□□□□ -0.59
HDLBP-201ENST00000310931 ERCC4Q92889 916 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-201ENST00000310931 DCTN1Q14203 1278 aa11.37□□□□□ -0.59
HDLBP-201ENST00000310931 C20orf194Q5TEA3 1177 aa11.37□□□□□ -0.59
HDLBP-201ENST00000310931 IBSPP21815 317 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-201ENST00000310931 FBLN1P23142 703 aa11.36□□□□□ -0.59
HDLBP-201ENST00000310931 TSR1Q2NL82 804 aaKnown RBP11.36□□□□□ -0.59
HDLBP-201ENST00000310931 CARD10Q9BWT7 1032 aa11.36□□□□□ -0.59
HDLBP-201ENST00000310931 TRIM5Q9C035 493 aa11.36□□□□□ -0.59
HDLBP-201ENST00000310931 CENPHQ9H3R5 247 aa11.36□□□□□ -0.59
HDLBP-201ENST00000310931 GTF2F1P35269 517 aaKnown RBP eCLIP11.36□□□□□ -0.591e-7■■■■□ 24.6
HDLBP-201ENST00000310931 ZNF530Q6P9A1 599 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-201ENST00000310931 DHX37Q8IY37 1157 aaKnown RBP11.36□□□□□ -0.59
HDLBP-201ENST00000310931 TEFQ10587 303 aa11.36□□□□□ -0.59
HDLBP-201ENST00000310931 COG6Q9Y2V7 657 aa11.36□□□□□ -0.59
HDLBP-201ENST00000310931 MBD3O95983 291 aa11.36□□□□□ -0.59
HDLBP-201ENST00000310931 TPM1P09493 284 aa11.36□□□□□ -0.59
HDLBP-201ENST00000310931 PIP4K2BP78356 416 aa11.36□□□□□ -0.59
HDLBP-201ENST00000310931 SPC24Q8NBT2 197 aa11.36□□□□□ -0.59
HDLBP-201ENST00000310931 SMC4Q9NTJ3 1288 aa11.36□□□□□ -0.59
HDLBP-201ENST00000310931 CAMTA1Q9Y6Y1 1673 aa11.36□□□□□ -0.59
HDLBP-201ENST00000310931 PES1O00541 588 aaKnown RBP11.35□□□□□ -0.59
HDLBP-201ENST00000310931 DYNC1I1O14576 645 aa11.35□□□□□ -0.59
HDLBP-201ENST00000310931 TRIM35Q9UPQ4 493 aa11.35□□□□□ -0.59
HDLBP-201ENST00000310931 THRAP3Q9Y2W1 955 aaKnown RBP11.35□□□□□ -0.59
HDLBP-201ENST00000310931 IFNL2Q8IZJ0 200 aa11.35□□□□□ -0.59
HDLBP-201ENST00000310931 PRPF40AO75400 957 aaKnown RBP11.35□□□□□ -0.59
HDLBP-201ENST00000310931 HMGB2P26583 209 aaKnown RBP11.34□□□□□ -0.59
HDLBP-201ENST00000310931 DDX17Q92841 729 aaKnown RBP11.34□□□□□ -0.59
HDLBP-201ENST00000310931 TSPY26PQ9H489 355 aa11.34□□□□□ -0.59
HDLBP-201ENST00000310931 CRYBG1Q9Y4K1 1723 aa11.34□□□□□ -0.59
HDLBP-201ENST00000310931 NBPF6Q5VWK0 638 aa11.34□□□□□ -0.59
HDLBP-201ENST00000310931 NBPF4Q96M43 638 aa11.34□□□□□ -0.59
HDLBP-201ENST00000310931 PCDH11XQ9BZA7 1347 aa11.34□□□□□ -0.59
HDLBP-201ENST00000310931 PCDH11YQ9BZA8 1340 aa11.34□□□□□ -0.59
HDLBP-201ENST00000310931 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-201ENST00000310931 IPO7O95373 1038 aaKnown RBP11.34□□□□□ -0.59
HDLBP-201ENST00000310931 TAF7Q15545 349 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-201ENST00000310931 BICD2Q8TD16 824 aa11.34□□□□□ -0.59
HDLBP-201ENST00000310931 MTHFSDQ2M296 383 aaKnown RBP11.33□□□□□ -0.6
HDLBP-201ENST00000310931 CRB1P82279 1406 aa11.33□□□□□ -0.6
HDLBP-201ENST00000310931 PDE3AQ14432 1141 aa11.33□□□□□ -0.6
HDLBP-201ENST00000310931 PHACTR3Q96KR7 559 aa11.33□□□□□ -0.6
HDLBP-201ENST00000310931 NEFHP12036 1026 aa11.33□□□□□ -0.6
HDLBP-201ENST00000310931 IL2RBP14784 551 aa11.33□□□□□ -0.6
HDLBP-201ENST00000310931 GTPBP4Q9BZE4 634 aaKnown RBP11.33□□□□□ -0.6
HDLBP-201ENST00000310931 LMO7Q8WWI1 1683 aa11.33□□□□□ -0.6
HDLBP-201ENST00000310931 IGSF3O75054 1194 aa11.33□□□□□ -0.6
HDLBP-201ENST00000310931 HOXB7P09629 217 aa11.33□□□□□ -0.6
HDLBP-201ENST00000310931 ANKRD45Q5TZF3 282 aa11.33□□□□□ -0.6
HDLBP-201ENST00000310931 TSPYL4Q9UJ04 414 aa11.33□□□□□ -0.6
HDLBP-201ENST00000310931 CABLES1Q8TDN4 633 aa11.32□□□□□ -0.6
HDLBP-201ENST00000310931 TOMM22Q9NS69 142 aa11.32□□□□□ -0.6
HDLBP-201ENST00000310931 COL16A1Q07092 1604 aaPredicted RBP11.32□□□□□ -0.6
HDLBP-201ENST00000310931 STK31Q9BXU1 1019 aa11.31□□□□□ -0.6
HDLBP-201ENST00000310931 ABCA3Q99758 1704 aa11.31□□□□□ -0.6
HDLBP-201ENST00000310931 PARP4Q9UKK3 1724 aaKnown RBP11.31□□□□□ -0.6
HDLBP-201ENST00000310931 SMAP1Q8IYB5 467 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-201ENST00000310931 ZNF853P0CG23 659 aa11.31□□□□□ -0.6
HDLBP-201ENST00000310931 TDO2P48775 406 aa11.31□□□□□ -0.6
HDLBP-201ENST00000310931 MNAT1P51948 309 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms