RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 CDCA7LQ96GN5 454 aa11.85□□□□□ -0.51
PDE4D-201ENST00000309641 BABAM1Q9NWV8 329 aa11.85□□□□□ -0.51
PDE4D-201ENST00000309641 ZBTB1Q9Y2K1 713 aa11.85□□□□□ -0.51
PDE4D-201ENST00000309641 CICQ96RK0 1608 aaPredicted RBP11.85□□□□□ -0.51
PDE4D-201ENST00000309641 PNPLA7Q6ZV29 1317 aa11.84□□□□□ -0.51
PDE4D-201ENST00000309641 ELL2O00472 640 aaPredicted RBP11.84□□□□□ -0.51
PDE4D-201ENST00000309641 PHF14O94880 888 aa11.84□□□□□ -0.51
PDE4D-201ENST00000309641 CALD1Q05682 793 aaKnown RBP11.84□□□□□ -0.51
PDE4D-201ENST00000309641 C8orf58Q8NAV2 365 aa11.84□□□□□ -0.51
PDE4D-201ENST00000309641 AK7Q96M32 723 aa11.84□□□□□ -0.51
PDE4D-201ENST00000309641 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
PDE4D-201ENST00000309641 UBR3Q6ZT12 1888 aa11.84□□□□□ -0.51
PDE4D-201ENST00000309641 TSPYL6Q8N831 410 aa11.84□□□□□ -0.51
PDE4D-201ENST00000309641 NECTIN2Q92692 538 aa11.84□□□□□ -0.51
PDE4D-201ENST00000309641 IL16Q14005 1332 aa11.83□□□□□ -0.52
PDE4D-201ENST00000309641 FANCIQ9NVI1 1328 aa11.83□□□□□ -0.52
PDE4D-201ENST00000309641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.83□□□□□ -0.52
PDE4D-201ENST00000309641 CANXP27824 592 aaKnown RBP11.83□□□□□ -0.52
PDE4D-201ENST00000309641 RC3H1Q5TC82 1133 aaKnown RBP11.83□□□□□ -0.52
PDE4D-201ENST00000309641 COL23A1Q86Y22 540 aaPredicted RBP11.83□□□□□ -0.52
PDE4D-201ENST00000309641 NGEFQ8N5V2 710 aa11.83□□□□□ -0.52
PDE4D-201ENST00000309641 CCDC87Q9NVE4 849 aa11.83□□□□□ -0.52
PDE4D-201ENST00000309641 NBPF26B4DH59 902 aa11.82□□□□□ -0.52
PDE4D-201ENST00000309641 STARD3NLO95772 234 aa11.82□□□□□ -0.52
PDE4D-201ENST00000309641 NBPF10Q6P3W6 841 aaKnown RBP11.82□□□□□ -0.52
PDE4D-201ENST00000309641 NBPF15Q8N660 670 aa11.82□□□□□ -0.52
PDE4D-201ENST00000309641 RPS6KA4O75676 772 aa11.82□□□□□ -0.52
PDE4D-201ENST00000309641 EIF2S2P20042 333 aaKnown RBP11.82□□□□□ -0.52
PDE4D-201ENST00000309641 DUSP27Q5VZP5 1158 aa11.82□□□□□ -0.52
PDE4D-201ENST00000309641 ANXA1P04083 346 aa11.81□□□□□ -0.52
PDE4D-201ENST00000309641 GOLGA2Q08379 1002 aa11.81□□□□□ -0.52
PDE4D-201ENST00000309641 TEX13AQ9BXU3 409 aaPredicted RBP11.81□□□□□ -0.52
PDE4D-201ENST00000309641 RTCBQ9Y3I0 505 aaKnown RBP11.81□□□□□ -0.52
PDE4D-201ENST00000309641 PROSER3Q2NL68 480 aa11.81□□□□□ -0.52
PDE4D-201ENST00000309641 ARHGEF1Q92888 912 aaKnown RBP11.81□□□□□ -0.52
PDE4D-201ENST00000309641 ZNF330Q9Y3S2 320 aaPredicted RBP11.81□□□□□ -0.52
PDE4D-201ENST00000309641 SOS1Q07889 1333 aaPredicted RBP11.8□□□□□ -0.52
PDE4D-201ENST00000309641 CASZ1Q86V15 1759 aa11.8□□□□□ -0.52
PDE4D-201ENST00000309641 MSH5O43196 834 aa11.8□□□□□ -0.52
PDE4D-201ENST00000309641 ZBTB7AO95365 584 aa11.8□□□□□ -0.52
PDE4D-201ENST00000309641 EXOSC9Q06265 439 aaKnown RBP11.8□□□□□ -0.52
PDE4D-201ENST00000309641 SLFN5Q08AF3 891 aa11.8□□□□□ -0.52
PDE4D-201ENST00000309641 LAMB4A4D0S4 1761 aa11.8□□□□□ -0.52
PDE4D-201ENST00000309641 SSFA2P28290 1259 aa11.79□□□□□ -0.52
PDE4D-201ENST00000309641 PDIA6Q15084 440 aa11.79□□□□□ -0.52
PDE4D-201ENST00000309641 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
PDE4D-201ENST00000309641 TCERG1O14776 1098 aaKnown RBP11.79□□□□□ -0.52
PDE4D-201ENST00000309641 MYL6BP14649 208 aa11.79□□□□□ -0.52
PDE4D-201ENST00000309641 EIF5P55010 431 aaKnown RBP11.79□□□□□ -0.52
PDE4D-201ENST00000309641 MSL1Q68DK7 614 aa11.79□□□□□ -0.52
PDE4D-201ENST00000309641 QSER1Q2KHR3 1735 aa11.78□□□□□ -0.52
PDE4D-201ENST00000309641 TRAPPC3LQ5T215 181 aa11.78□□□□□ -0.52
PDE4D-201ENST00000309641 HDGFL1Q5TGJ6 251 aa11.78□□□□□ -0.52
PDE4D-201ENST00000309641 LRP10Q7Z4F1 713 aa11.78□□□□□ -0.52
PDE4D-201ENST00000309641 ATF5Q9Y2D1 282 aaPredicted RBP11.78□□□□□ -0.52
PDE4D-201ENST00000309641 C4AP0C0L4 1744 aa11.78□□□□□ -0.52
PDE4D-201ENST00000309641 COL15A1P39059 1388 aa11.78□□□□□ -0.52
PDE4D-201ENST00000309641 GOLGB1Q14789 3259 aaKnown RBP11.78□□□□□ -0.52
PDE4D-201ENST00000309641 TWISTNBQ3B726 338 aaPredicted RBP11.77□□□□□ -0.52
PDE4D-201ENST00000309641 TRMT2AQ8IZ69 625 aaKnown RBP11.77□□□□□ -0.52
PDE4D-201ENST00000309641 MYH16Q9H6N6 1097 aa11.77□□□□□ -0.52
PDE4D-201ENST00000309641 CHPF2Q9P2E5 772 aa11.77□□□□□ -0.52
PDE4D-201ENST00000309641 TBC1D2BQ9UPU7 963 aa11.77□□□□□ -0.52
PDE4D-201ENST00000309641 E9PSI1 815 aa11.77□□□□□ -0.53
PDE4D-201ENST00000309641 IL6STP40189 918 aaPredicted RBP11.77□□□□□ -0.53
PDE4D-201ENST00000309641 YTHDC1Q96MU7 727 aaKnown RBP11.77□□□□□ -0.53
PDE4D-201ENST00000309641 HOXB7P09629 217 aa11.76□□□□□ -0.53
PDE4D-201ENST00000309641 RFC4P35249 363 aa11.76□□□□□ -0.53
PDE4D-201ENST00000309641 TTLL7Q6ZT98 887 aa11.76□□□□□ -0.53
PDE4D-201ENST00000309641 ARXQ96QS3 562 aa11.76□□□□□ -0.53
PDE4D-201ENST00000309641 ZBED9Q6R2W3 1325 aa11.76□□□□□ -0.53
PDE4D-201ENST00000309641 VAMP4O75379 141 aa11.76□□□□□ -0.53
PDE4D-201ENST00000309641 ADRA2BP18089 450 aa11.76□□□□□ -0.53
PDE4D-201ENST00000309641 HMGB2P26583 209 aaKnown RBP11.76□□□□□ -0.53
PDE4D-201ENST00000309641 FLAD1Q8NFF5 587 aa11.76□□□□□ -0.53
PDE4D-201ENST00000309641 BCL2L12Q9HB09 334 aa11.76□□□□□ -0.53
PDE4D-201ENST00000309641 USP42Q9H9J4 1324 aaKnown RBP11.75□□□□□ -0.53
PDE4D-201ENST00000309641 GYS1P13807 737 aa11.75□□□□□ -0.53
PDE4D-201ENST00000309641 FKBP8Q14318 412 aa11.75□□□□□ -0.53
PDE4D-201ENST00000309641 USPL1Q5W0Q7 1092 aa11.75□□□□□ -0.53
PDE4D-201ENST00000309641 PTGER2P43116 358 aa11.74□□□□□ -0.53
PDE4D-201ENST00000309641 DZIP3Q86Y13 1208 aaKnown RBP11.74□□□□□ -0.53
PDE4D-201ENST00000309641 DDX21Q9NR30 783 aaKnown RBP eCLIP11.74□□□□□ -0.53
PDE4D-201ENST00000309641 CAMTA2O94983 1202 aa11.74□□□□□ -0.53
PDE4D-201ENST00000309641 AIMP1Q12904 312 aaKnown RBP11.74□□□□□ -0.53
PDE4D-201ENST00000309641 MTFR1LQ9H019 292 aa11.74□□□□□ -0.53
PDE4D-201ENST00000309641 PHAXQ9H814 394 aaKnown RBP11.74□□□□□ -0.53
PDE4D-201ENST00000309641 NARFQ9UHQ1 456 aa11.74□□□□□ -0.53
PDE4D-201ENST00000309641 HLFQ16534 295 aa11.73□□□□□ -0.53
PDE4D-201ENST00000309641 COPS6Q7L5N1 327 aa11.73□□□□□ -0.53
PDE4D-201ENST00000309641 SLC16A10Q8TF71 515 aa11.73□□□□□ -0.53
PDE4D-201ENST00000309641 XAGE3Q8WTP9 111 aa11.73□□□□□ -0.53
PDE4D-201ENST00000309641 SGIP1Q9BQI5 828 aa11.73□□□□□ -0.53
PDE4D-201ENST00000309641 DBF4Q9UBU7 674 aaPredicted RBP11.73□□□□□ -0.53
PDE4D-201ENST00000309641 ERBB4Q15303 1308 aa11.73□□□□□ -0.53
PDE4D-201ENST00000309641 ZPR1O75312 459 aa11.72□□□□□ -0.53
PDE4D-201ENST00000309641 G2E3Q7L622 706 aa11.72□□□□□ -0.53
PDE4D-201ENST00000309641 CCDC30Q5VVM6 783 aa11.72□□□□□ -0.53
PDE4D-201ENST00000309641 ZBTB3Q9H5J0 574 aa11.72□□□□□ -0.53
PDE4D-201ENST00000309641 SPON1Q9HCB6 807 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms