RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 POLRMTO00411 1230 aaKnown RBP27.55■■■□□ 2
RER1-201ENST00000306256 KCNA3P22001 575 aa27.55■■■□□ 2
RER1-201ENST00000306256 TTC5Q8N0Z6 440 aa27.55■■■□□ 2
RER1-201ENST00000306256 VSIG10Q8N0Z9 540 aa27.55■■■□□ 2
RER1-201ENST00000306256 CFAP53Q96M91 514 aa27.55■■■□□ 2
RER1-201ENST00000306256 TEFQ10587 303 aa27.54■■■□□ 2
RER1-201ENST00000306256 TM4SF1P30408 202 aa27.53■■■□□ 2
RER1-201ENST00000306256 PRKAR2BP31323 418 aa27.53■■■□□ 2
RER1-201ENST00000306256 ARHGAP27Q6ZUM4 889 aa27.53■■■□□ 2
RER1-201ENST00000306256 PHACTR3Q96KR7 559 aa27.53■■■□□ 2
RER1-201ENST00000306256 NARFQ9UHQ1 456 aa27.53■■■□□ 2
RER1-201ENST00000306256 CANXP27824 592 aaKnown RBP27.52■■■□□ 2
RER1-201ENST00000306256 ZNF496Q96IT1 587 aaPredicted RBP27.52■■■□□ 2
RER1-201ENST00000306256 RSPH6AQ9H0K4 717 aa27.52■■■□□ 2
RER1-201ENST00000306256 NRXN2Q9P2S2 1712 aa27.52■■■□□ 2
RER1-201ENST00000306256 CHRNA5P30532 468 aa27.51■■□□□ 1.99
RER1-201ENST00000306256 PPP2R1AP30153 589 aa27.5■■□□□ 1.99
RER1-201ENST00000306256 NFIXQ14938 502 aa27.5■■□□□ 1.99
RER1-201ENST00000306256 ZNF790Q6PG37 636 aa27.5■■□□□ 1.99
RER1-201ENST00000306256 BCL2L12Q9HB09 334 aa27.5■■□□□ 1.99
RER1-201ENST00000306256 PIM2Q9P1W9 311 aa27.5■■□□□ 1.99
RER1-201ENST00000306256 HEG1Q9ULI3 1381 aa27.49■■□□□ 1.99
RER1-201ENST00000306256 STARD3NLO95772 234 aa27.48■■□□□ 1.99
RER1-201ENST00000306256 CEMIPQ8WUJ3 1361 aa27.48■■□□□ 1.99
RER1-201ENST00000306256 SBF1O95248 1867 aa27.47■■□□□ 1.99
RER1-201ENST00000306256 SCN7AQ01118 1682 aa27.46■■□□□ 1.99
RER1-201ENST00000306256 DLEC1Q9Y238 1755 aa27.46■■□□□ 1.99
RER1-201ENST00000306256 U2AF1L5P0DN76 240 aaPredicted RBP27.46■■□□□ 1.99
RER1-201ENST00000306256 U2AF1Q01081 240 aaKnown RBP eCLIP27.46■■□□□ 1.99
RER1-201ENST00000306256 DALRD3Q5D0E6 543 aaKnown RBP27.46■■□□□ 1.99
RER1-201ENST00000306256 NUDCQ9Y266 331 aa27.46■■□□□ 1.99
RER1-201ENST00000306256 EIF5P55010 431 aaKnown RBP27.45■■□□□ 1.98
RER1-201ENST00000306256 KCNQ3O43525 872 aa27.44■■□□□ 1.98
RER1-201ENST00000306256 ZNF330Q9Y3S2 320 aaPredicted RBP27.44■■□□□ 1.98
RER1-201ENST00000306256 KIF3CO14782 793 aa27.43■■□□□ 1.98
RER1-201ENST00000306256 SERPINB2P05120 415 aa27.42■■□□□ 1.98
RER1-201ENST00000306256 BICDL1Q6ZP65 573 aa27.42■■□□□ 1.98
RER1-201ENST00000306256 FMNL2Q96PY5 1086 aa27.42■■□□□ 1.98
RER1-201ENST00000306256 ANKRD31Q8N7Z5 1873 aa27.42■■□□□ 1.98
RER1-201ENST00000306256 BTBD11A6QL63 1104 aa27.41■■□□□ 1.98
RER1-201ENST00000306256 C9orf131Q5VYM1 1079 aa27.41■■□□□ 1.98
RER1-201ENST00000306256 TEX13AQ9BXU3 409 aaPredicted RBP27.41■■□□□ 1.98
RER1-201ENST00000306256 DLG5Q8TDM6 1919 aa27.41■■□□□ 1.98
RER1-201ENST00000306256 CARMIL3Q8ND23 1372 aa27.4■■□□□ 1.98
RER1-201ENST00000306256 A0A087WZG4 1122 aa27.4■■□□□ 1.98
RER1-201ENST00000306256 A1BGP04217 495 aa27.39■■□□□ 1.98
RER1-201ENST00000306256 MCM10Q7L590 875 aa27.39■■□□□ 1.98
RER1-201ENST00000306256 TBC1D2BQ9UPU7 963 aa27.39■■□□□ 1.98
RER1-201ENST00000306256 CCDC88AQ3V6T2 1871 aa27.38■■□□□ 1.97
RER1-201ENST00000306256 BCORQ6W2J9 1755 aa27.38■■□□□ 1.97
RER1-201ENST00000306256 TBC1D9BQ66K14 1250 aa27.37■■□□□ 1.97
RER1-201ENST00000306256 IL6STP40189 918 aaPredicted RBP27.36■■□□□ 1.97
RER1-201ENST00000306256 DCTN1Q14203 1278 aa27.36■■□□□ 1.97
RER1-201ENST00000306256 RTF1Q92541 710 aaKnown RBP27.36■■□□□ 1.97
RER1-201ENST00000306256 NMRK2Q9NPI5 230 aa27.35■■□□□ 1.97
RER1-201ENST00000306256 COL11A2P13942 1736 aaPredicted RBP27.35■■□□□ 1.97
RER1-201ENST00000306256 PRAMEF22A3QJZ6 481 aa27.34■■□□□ 1.97
RER1-201ENST00000306256 HSPA6P17066 643 aa27.34■■□□□ 1.97
RER1-201ENST00000306256 PIP4K2AP48426 406 aaPredicted RBP27.34■■□□□ 1.97
RER1-201ENST00000306256 C2CD5Q86YS7 1000 aa27.34■■□□□ 1.97
RER1-201ENST00000306256 RNF181Q9P0P0 153 aa27.34■■□□□ 1.97
RER1-201ENST00000306256 USP16Q9Y5T5 823 aa27.33■■□□□ 1.97
RER1-201ENST00000306256 CACNA1SQ13698 1873 aa27.32■■□□□ 1.96
RER1-201ENST00000306256 RASSF7Q02833 373 aa27.32■■□□□ 1.96
RER1-201ENST00000306256 CCDC24Q8N4L8 307 aa27.32■■□□□ 1.96
RER1-201ENST00000306256 CEP350Q5VT06 3117 aa27.31■■□□□ 1.96
RER1-201ENST00000306256 CAMTA2O94983 1202 aa27.31■■□□□ 1.96
RER1-201ENST00000306256 NPM2Q86SE8 214 aaKnown RBP27.31■■□□□ 1.96
RER1-201ENST00000306256 H0YIN7 160 aa27.29■■□□□ 1.96
RER1-201ENST00000306256 TTLL6Q8N841 843 aa27.29■■□□□ 1.96
RER1-201ENST00000306256 SNRPA1P09661 255 aaKnown RBP27.28■■□□□ 1.96
RER1-201ENST00000306256 PRR5LQ6MZQ0 368 aa27.28■■□□□ 1.96
RER1-201ENST00000306256 DZIP3Q86Y13 1208 aaKnown RBP27.28■■□□□ 1.96
RER1-201ENST00000306256 LAMB4A4D0S4 1761 aa27.27■■□□□ 1.96
RER1-201ENST00000306256 HTATSF1O43719 755 aaKnown RBP27.27■■□□□ 1.96
RER1-201ENST00000306256 TIAM2Q8IVF5 1701 aa27.27■■□□□ 1.96
RER1-201ENST00000306256 TNRC6CQ9HCJ0 1690 aaKnown RBP27.27■■□□□ 1.96
RER1-201ENST00000306256 TOMM70O94826 608 aa27.26■■□□□ 1.95
RER1-201ENST00000306256 KDM3BQ7LBC6 1761 aa27.26■■□□□ 1.95
RER1-201ENST00000306256 SETDB2Q96T68 719 aa27.25■■□□□ 1.95
RER1-201ENST00000306256 MIS18AQ9NYP9 233 aa27.25■■□□□ 1.95
RER1-201ENST00000306256 PRELPP51888 382 aa27.24■■□□□ 1.95
RER1-201ENST00000306256 ZNF622Q969S3 477 aaKnown RBP eCLIP27.24■■□□□ 1.95
RER1-201ENST00000306256 BRIP1Q9BX63 1249 aa27.24■■□□□ 1.95
RER1-201ENST00000306256 SLX4Q8IY92 1834 aa27.23■■□□□ 1.95
RER1-201ENST00000306256 TAF7Q15545 349 aaPredicted RBP27.23■■□□□ 1.95
RER1-201ENST00000306256 CNBD1Q8NA66 436 aa27.23■■□□□ 1.95
RER1-201ENST00000306256 FER1L6Q2WGJ9 1857 aa27.23■■□□□ 1.95
RER1-201ENST00000306256 KDM2BQ8NHM5 1336 aa27.22■■□□□ 1.95
RER1-201ENST00000306256 NBPF26B4DH59 902 aa27.22■■□□□ 1.95
RER1-201ENST00000306256 NPHP1O15259 732 aa27.22■■□□□ 1.95
RER1-201ENST00000306256 NEFMP07197 916 aa27.22■■□□□ 1.95
RER1-201ENST00000306256 PDE6BP35913 854 aa27.22■■□□□ 1.95
RER1-201ENST00000306256 NBPF10Q6P3W6 841 aaKnown RBP27.22■■□□□ 1.95
RER1-201ENST00000306256 NBPF15Q8N660 670 aa27.22■■□□□ 1.95
RER1-201ENST00000306256 ZNF219Q9P2Y4 722 aaPredicted RBP27.21■■□□□ 1.95
RER1-201ENST00000306256 ARFGEF2Q9Y6D5 1785 aa27.21■■□□□ 1.95
RER1-201ENST00000306256 DICER1Q9UPY3 1922 aaKnown RBP27.21■■□□□ 1.95
RER1-201ENST00000306256 NFKBIEO00221 500 aa27.2■■□□□ 1.94
RER1-201ENST00000306256 LMNB1P20700 586 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms