RNA–Protein interactions for RNA: ENST00000305510.3

CNNM3-201, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNNM3, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-201ENST00000305510 SPG7Q9UQ90 795 aa21.73■■□□□ 1.07
CNNM3-201ENST00000305510 ESCO1Q5FWF5 840 aa21.72■■□□□ 1.07
CNNM3-201ENST00000305510 PIBF1Q8WXW3 757 aa21.72■■□□□ 1.07
CNNM3-201ENST00000305510 LRRC59Q96AG4 307 aaKnown RBP21.72■■□□□ 1.07
CNNM3-201ENST00000305510 A2ML1A8K2U0 1454 aa21.72■■□□□ 1.07
CNNM3-201ENST00000305510 PSME1Q06323 249 aa21.72■■□□□ 1.07
CNNM3-201ENST00000305510 TSPY26PQ9H489 355 aa21.72■■□□□ 1.07
CNNM3-201ENST00000305510 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.71■■□□□ 1.07
CNNM3-201ENST00000305510 GNAI3P08754 354 aa21.71■■□□□ 1.07
CNNM3-201ENST00000305510 TMX3Q96JJ7 454 aa21.71■■□□□ 1.07
CNNM3-201ENST00000305510 CHAF1AQ13111 956 aaPredicted RBP21.71■■□□□ 1.07
CNNM3-201ENST00000305510 USP25Q9UHP3 1055 aa21.71■■□□□ 1.07
CNNM3-201ENST00000305510 PTPRCP08575 1304 aa21.7■■□□□ 1.07
CNNM3-201ENST00000305510 KCNQ3O43525 872 aa21.7■■□□□ 1.06
CNNM3-201ENST00000305510 BRPF1P55201 1214 aaPredicted RBP21.7■■□□□ 1.06
CNNM3-201ENST00000305510 PPP1R42Q7Z4L9 355 aa21.7■■□□□ 1.06
CNNM3-201ENST00000305510 SIL1Q9H173 461 aa21.7■■□□□ 1.06
CNNM3-201ENST00000305510 C9orf78Q9NZ63 289 aaPredicted RBP21.7■■□□□ 1.06
CNNM3-201ENST00000305510 TNRQ92752 1358 aa21.7■■□□□ 1.06
CNNM3-201ENST00000305510 LGR6Q9HBX8 967 aa21.7■■□□□ 1.06
CNNM3-201ENST00000305510 PI4KAP2A4QPH2 592 aa21.69■■□□□ 1.06
CNNM3-201ENST00000305510 PI4KAP1Q8N8J0 262 aa21.69■■□□□ 1.06
CNNM3-201ENST00000305510 IL17REQ8NFR9 667 aa21.69■■□□□ 1.06
CNNM3-201ENST00000305510 GTF2F1P35269 517 aaKnown RBP eCLIP21.68■■□□□ 1.06
CNNM3-201ENST00000305510 KCNA6P17658 529 aa21.68■■□□□ 1.06
CNNM3-201ENST00000305510 MAP2P11137 1827 aaKnown RBP21.68■■□□□ 1.06
CNNM3-201ENST00000305510 PTCH1Q13635 1447 aa21.67■■□□□ 1.06
CNNM3-201ENST00000305510 RIOK3O14730 519 aaKnown RBP21.67■■□□□ 1.06
CNNM3-201ENST00000305510 CHPF2Q9P2E5 772 aa21.67■■□□□ 1.06
CNNM3-201ENST00000305510 NBPF7P0C2Y1 421 aaPredicted RBP21.67■■□□□ 1.06
CNNM3-201ENST00000305510 PIP4K2AP48426 406 aaPredicted RBP21.67■■□□□ 1.06
CNNM3-201ENST00000305510 SRCIN1Q9C0H9 1055 aa21.67■■□□□ 1.06
CNNM3-201ENST00000305510 PIK3R4Q99570 1358 aa21.66■■□□□ 1.06
CNNM3-201ENST00000305510 ADGRB2O60241 1585 aa21.66■■□□□ 1.06
CNNM3-201ENST00000305510 IRX5P78411 483 aaPredicted RBP21.66■■□□□ 1.06
CNNM3-201ENST00000305510 ESYT1Q9BSJ8 1104 aa21.65■■□□□ 1.06
CNNM3-201ENST00000305510 PA2G4Q9UQ80 394 aaKnown RBP21.65■■□□□ 1.06
CNNM3-201ENST00000305510 ZNF530Q6P9A1 599 aaPredicted RBP21.65■■□□□ 1.06
CNNM3-201ENST00000305510 SETD1BQ9UPS6 1966 aaKnown RBP21.64■■□□□ 1.06
CNNM3-201ENST00000305510 NEURL4Q96JN8 1562 aa21.64■■□□□ 1.05
CNNM3-201ENST00000305510 TCEANC2Q96MN5 208 aa21.64■■□□□ 1.05
CNNM3-201ENST00000305510 FIBPO43427 364 aa21.63■■□□□ 1.05
CNNM3-201ENST00000305510 CYP2E1P05181 493 aaPredicted RBP21.63■■□□□ 1.05
CNNM3-201ENST00000305510 DIAPH3Q9NSV4 1193 aa21.63■■□□□ 1.05
CNNM3-201ENST00000305510 CPSF1Q10570 1443 aaKnown RBP21.63■■□□□ 1.05
CNNM3-201ENST00000305510 ATP7BP35670 1465 aa21.63■■□□□ 1.05
CNNM3-201ENST00000305510 ADCY5O95622 1261 aa21.62■■□□□ 1.05
CNNM3-201ENST00000305510 TRERF1Q96PN7 1200 aa21.62■■□□□ 1.05
CNNM3-201ENST00000305510 USP44Q9H0E7 712 aa21.62■■□□□ 1.05
CNNM3-201ENST00000305510 ERICH4A6NGS2 130 aa21.62■■□□□ 1.05
CNNM3-201ENST00000305510 MYL6BP14649 208 aa21.62■■□□□ 1.05
CNNM3-201ENST00000305510 HOXC9P31274 260 aa21.62■■□□□ 1.05
CNNM3-201ENST00000305510 ZDHHC9Q9Y397 364 aa21.62■■□□□ 1.05
CNNM3-201ENST00000305510 MBD3O95983 291 aa21.62■■□□□ 1.05
CNNM3-201ENST00000305510 CHMLP26374 656 aa21.62■■□□□ 1.05
CNNM3-201ENST00000305510 TMEM131LA2VDJ0 1609 aa21.61■■□□□ 1.05
CNNM3-201ENST00000305510 VPS37CA5D8V6 355 aaPredicted RBP21.61■■□□□ 1.05
CNNM3-201ENST00000305510 BTBD11A6QL63 1104 aa21.61■■□□□ 1.05
CNNM3-201ENST00000305510 ZC3H6P61129 1189 aaKnown RBP21.61■■□□□ 1.05
CNNM3-201ENST00000305510 ATP8B2P98198 1209 aa21.61■■□□□ 1.05
CNNM3-201ENST00000305510 IL25Q9H293 177 aa21.61■■□□□ 1.05
CNNM3-201ENST00000305510 AATKQ6ZMQ8 1374 aa21.61■■□□□ 1.05
CNNM3-201ENST00000305510 CWF19L2Q2TBE0 894 aaKnown RBP21.6■■□□□ 1.05
CNNM3-201ENST00000305510 CERS3Q8IU89 383 aa21.6■■□□□ 1.05
CNNM3-201ENST00000305510 OGFRQ9NZT2 677 aa21.6■■□□□ 1.05
CNNM3-201ENST00000305510 TMEM2Q9UHN6 1383 aa21.6■■□□□ 1.05
CNNM3-201ENST00000305510 CWC22Q9HCG8 908 aaKnown RBP21.6■■□□□ 1.05
CNNM3-201ENST00000305510 ZNF330Q9Y3S2 320 aaPredicted RBP21.6■■□□□ 1.05
CNNM3-201ENST00000305510 MED14O60244 1454 aa21.6■■□□□ 1.05
CNNM3-201ENST00000305510 PLEKHG3A1L390 1219 aa21.6■■□□□ 1.05
CNNM3-201ENST00000305510 FOSBP53539 338 aa21.6■■□□□ 1.05
CNNM3-201ENST00000305510 CFAP74Q9C0B2 1584 aa21.59■■□□□ 1.05
CNNM3-201ENST00000305510 PPFIA3O75145 1194 aa21.59■■□□□ 1.05
CNNM3-201ENST00000305510 CCDC8Q9H0W5 538 aaPredicted RBP21.59■■□□□ 1.05
CNNM3-201ENST00000305510 PRAMEF22A3QJZ6 481 aa21.59■■□□□ 1.05
CNNM3-201ENST00000305510 IFIT2P09913 472 aaKnown RBP21.59■■□□□ 1.05
CNNM3-201ENST00000305510 C1orf141Q5JVX7 400 aa21.58■■□□□ 1.05
CNNM3-201ENST00000305510 SYAP1Q96A49 352 aaPredicted RBP21.58■■□□□ 1.05
CNNM3-201ENST00000305510 RHPN1Q8TCX5 695 aa21.58■■□□□ 1.05
CNNM3-201ENST00000305510 FEZ1Q99689 392 aa21.58■■□□□ 1.05
CNNM3-201ENST00000305510 CDK12Q9NYV4 1490 aaPredicted RBP21.58■■□□□ 1.04
CNNM3-201ENST00000305510 FLT4P35916 1363 aa21.58■■□□□ 1.04
CNNM3-201ENST00000305510 NBPF6Q5VWK0 638 aa21.58■■□□□ 1.04
CNNM3-201ENST00000305510 FERMT3Q86UX7 667 aa21.58■■□□□ 1.04
CNNM3-201ENST00000305510 NBPF4Q96M43 638 aa21.58■■□□□ 1.04
CNNM3-201ENST00000305510 PPP6R1Q9UPN7 881 aa21.57■■□□□ 1.04
CNNM3-201ENST00000305510 SLC39A6Q13433 755 aa21.57■■□□□ 1.04
CNNM3-201ENST00000305510 SPC24Q8NBT2 197 aa21.57■■□□□ 1.04
CNNM3-201ENST00000305510 KLHDC4Q8TBB5 520 aa21.57■■□□□ 1.04
CNNM3-201ENST00000305510 GADD45BO75293 160 aaPredicted RBP21.57■■□□□ 1.04
CNNM3-201ENST00000305510 CASTP20810 708 aaKnown RBP21.57■■□□□ 1.04
CNNM3-201ENST00000305510 CSB-PGBD3P0DP91 1061 aa21.56■■□□□ 1.04
CNNM3-201ENST00000305510 CCDC66A2RUB6 948 aa21.56■■□□□ 1.04
CNNM3-201ENST00000305510 STK3Q13188 491 aa21.56■■□□□ 1.04
CNNM3-201ENST00000305510 PRPF40BQ6NWY9 871 aaKnown RBP21.56■■□□□ 1.04
CNNM3-201ENST00000305510 PREX1Q8TCU6 1659 aa21.56■■□□□ 1.04
CNNM3-201ENST00000305510 CCDC83Q8IWF9 413 aa21.55■■□□□ 1.04
CNNM3-201ENST00000305510 ATP10DQ9P241 1426 aa21.55■■□□□ 1.04
CNNM3-201ENST00000305510 CLASRPQ8N2M8 674 aaKnown RBP21.55■■□□□ 1.04
CNNM3-201ENST00000305510 ANKRD7Q92527 254 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms