RNA–Protein interactions for RNA: ENST00000304330.8

RPAP1-201, Transcript of RNA polymerase II associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAP1, Length 4,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-201ENST00000304330 ATP10AO60312 1499 aa13.73□□□□□ -0.21
RPAP1-201ENST00000304330 LRSAM1Q6UWE0 723 aa13.73□□□□□ -0.21
RPAP1-201ENST00000304330 TRMT2AQ8IZ69 625 aaKnown RBP13.73□□□□□ -0.21
RPAP1-201ENST00000304330 RHPN1Q8TCX5 695 aa13.73□□□□□ -0.21
RPAP1-201ENST00000304330 TTC37Q6PGP7 1564 aa13.73□□□□□ -0.21
RPAP1-201ENST00000304330 PPP1R42Q7Z4L9 355 aa13.73□□□□□ -0.21
RPAP1-201ENST00000304330 SPC24Q8NBT2 197 aa13.73□□□□□ -0.21
RPAP1-201ENST00000304330 TMX3Q96JJ7 454 aa13.73□□□□□ -0.21
RPAP1-201ENST00000304330 MEIS3Q99687 375 aa13.73□□□□□ -0.21
RPAP1-201ENST00000304330 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.73□□□□□ -0.21
RPAP1-201ENST00000304330 EIF4A2Q14240 407 aaKnown RBP13.73□□□□□ -0.21
RPAP1-201ENST00000304330 NOL7Q9UMY1 257 aaKnown RBP13.73□□□□□ -0.21
RPAP1-201ENST00000304330 CCDC66A2RUB6 948 aa13.72□□□□□ -0.21
RPAP1-201ENST00000304330 FAM83GA6ND36 823 aa13.72□□□□□ -0.21
RPAP1-201ENST00000304330 ZBTB7BO15156 539 aaPredicted RBP13.72□□□□□ -0.21
RPAP1-201ENST00000304330 EPB41L2O43491 1005 aaKnown RBP13.72□□□□□ -0.21
RPAP1-201ENST00000304330 TTC41PQ6P2S7 1318 aa13.72□□□□□ -0.21
RPAP1-201ENST00000304330 CEP85Q6P2H3 762 aa13.72□□□□□ -0.21
RPAP1-201ENST00000304330 TOM1L2Q6ZVM7 507 aa13.72□□□□□ -0.21
RPAP1-201ENST00000304330 PRDM15P57071 1507 aaPredicted RBP13.72□□□□□ -0.21
RPAP1-201ENST00000304330 CCDC69A6NI79 296 aa13.72□□□□□ -0.21
RPAP1-201ENST00000304330 SERPINC1P01008 464 aa13.72□□□□□ -0.21
RPAP1-201ENST00000304330 RBM33Q96EV2 1170 aaKnown RBP13.71□□□□□ -0.21
RPAP1-201ENST00000304330 CLSTN1O94985 981 aa13.71□□□□□ -0.21
RPAP1-201ENST00000304330 PDILTQ8N807 584 aa13.71□□□□□ -0.21
RPAP1-201ENST00000304330 XRCC6P12956 609 aaKnown RBP eCLIP13.71□□□□□ -0.22
RPAP1-201ENST00000304330 FBXW7Q969H0 707 aa13.71□□□□□ -0.22
RPAP1-201ENST00000304330 FMNL2Q96PY5 1086 aa13.71□□□□□ -0.22
RPAP1-201ENST00000304330 CEP131Q9UPN4 1083 aa13.71□□□□□ -0.22
RPAP1-201ENST00000304330 SAMD9LQ8IVG5 1584 aa13.71□□□□□ -0.22
RPAP1-201ENST00000304330 PREX2Q70Z35 1606 aa13.71□□□□□ -0.22
RPAP1-201ENST00000304330 HSP90AB3PQ58FF7 597 aa13.7□□□□□ -0.22
RPAP1-201ENST00000304330 ZSCAN23Q3MJ62 389 aa13.7□□□□□ -0.22
RPAP1-201ENST00000304330 PLEKHM2Q8IWE5 1019 aa13.7□□□□□ -0.22
RPAP1-201ENST00000304330 AK7Q96M32 723 aa13.7□□□□□ -0.22
RPAP1-201ENST00000304330 ZSCAN16Q9H4T2 348 aaPredicted RBP13.7□□□□□ -0.22
RPAP1-201ENST00000304330 PRDM11Q9NQV5 511 aa13.7□□□□□ -0.22
RPAP1-201ENST00000304330 AOX1Q06278 1338 aa13.7□□□□□ -0.22
RPAP1-201ENST00000304330 ADCY10Q96PN6 1610 aa13.7□□□□□ -0.22
RPAP1-201ENST00000304330 CFAP74Q9C0B2 1584 aa13.7□□□□□ -0.22
RPAP1-201ENST00000304330 NEO1Q92859 1461 aa13.7□□□□□ -0.22
RPAP1-201ENST00000304330 STARD3NLO95772 234 aa13.7□□□□□ -0.22
RPAP1-201ENST00000304330 CEBPZQ03701 1054 aaKnown RBP13.7□□□□□ -0.22
RPAP1-201ENST00000304330 TXLNBQ8N3L3 684 aa13.7□□□□□ -0.22
RPAP1-201ENST00000304330 SIRT1Q96EB6 747 aa13.7□□□□□ -0.22
RPAP1-201ENST00000304330 BOLA2Q9H3K6 86 aa13.7□□□□□ -0.22
RPAP1-201ENST00000304330 ZNF521Q96K83 1311 aa13.69□□□□□ -0.22
RPAP1-201ENST00000304330 ZSCAN22P10073 491 aaPredicted RBP13.69□□□□□ -0.22
RPAP1-201ENST00000304330 HSP90AB2PQ58FF8 381 aa13.69□□□□□ -0.22
RPAP1-201ENST00000304330 STIM1Q13586 685 aa13.69□□□□□ -0.22
RPAP1-201ENST00000304330 RBM42Q9BTD8 480 aaKnown RBP13.69□□□□□ -0.22
RPAP1-201ENST00000304330 ANO8Q9HCE9 1232 aaPredicted RBP13.69□□□□□ -0.22
RPAP1-201ENST00000304330 CCDC196A0A1B0GTZ2 297 aa13.69□□□□□ -0.22
RPAP1-201ENST00000304330 IFIT1P09914 478 aaKnown RBP13.69□□□□□ -0.22
RPAP1-201ENST00000304330 CDR1P51861 262 aa13.69□□□□□ -0.22
RPAP1-201ENST00000304330 SETQ01105 290 aaPredicted RBP13.69□□□□□ -0.22
RPAP1-201ENST00000304330 FKBP4Q02790 459 aaKnown RBP eCLIP13.69□□□□□ -0.22
RPAP1-201ENST00000304330 PPFIBP1Q86W92 1011 aa13.69□□□□□ -0.22
RPAP1-201ENST00000304330 MPHOSPH8Q99549 860 aa13.69□□□□□ -0.22
RPAP1-201ENST00000304330 TRIM34Q9BYJ4 488 aa13.69□□□□□ -0.22
RPAP1-201ENST00000304330 CWC15Q9P013 229 aaKnown RBP13.69□□□□□ -0.22
RPAP1-201ENST00000304330 MAGEC2Q9UBF1 373 aaPredicted RBP13.69□□□□□ -0.22
RPAP1-201ENST00000304330 MAGI2Q86UL8 1455 aa13.69□□□□□ -0.22
RPAP1-201ENST00000304330 PI4KAP2A4QPH2 592 aa13.68□□□□□ -0.22
RPAP1-201ENST00000304330 HOXB7P09629 217 aa13.68□□□□□ -0.22
RPAP1-201ENST00000304330 PI4KAP1Q8N8J0 262 aa13.68□□□□□ -0.22
RPAP1-201ENST00000304330 PRIMPOLQ96LW4 560 aa13.68□□□□□ -0.22
RPAP1-201ENST00000304330 MYD88Q99836 296 aa13.68□□□□□ -0.22
RPAP1-201ENST00000304330 TRIM35Q9UPQ4 493 aa13.68□□□□□ -0.22
RPAP1-201ENST00000304330 RAD50Q92878 1312 aa13.68□□□□□ -0.22
RPAP1-201ENST00000304330 TNNQ9UQP3 1299 aa13.68□□□□□ -0.22
RPAP1-201ENST00000304330 GJB2P29033 226 aa13.67□□□□□ -0.22
RPAP1-201ENST00000304330 GSDMDP57764 484 aa13.67□□□□□ -0.22
RPAP1-201ENST00000304330 AKAP4Q5JQC9 854 aa13.67□□□□□ -0.22
RPAP1-201ENST00000304330 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
RPAP1-201ENST00000304330 IFNL2Q8IZJ0 200 aa13.67□□□□□ -0.22
RPAP1-201ENST00000304330 TEX13AQ9BXU3 409 aaPredicted RBP13.67□□□□□ -0.22
RPAP1-201ENST00000304330 PDCL3Q9H2J4 239 aa13.67□□□□□ -0.22
RPAP1-201ENST00000304330 MAP3K2Q9Y2U5 619 aa13.67□□□□□ -0.22
RPAP1-201ENST00000304330 IL13P35225 146 aa13.67□□□□□ -0.22
RPAP1-201ENST00000304330 USP26Q9BXU7 913 aa13.67□□□□□ -0.22
RPAP1-201ENST00000304330 KIAA0232Q92628 1395 aa13.67□□□□□ -0.22
RPAP1-201ENST00000304330 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.66□□□□□ -0.22
RPAP1-201ENST00000304330 RUFY1Q96T51 708 aa13.66□□□□□ -0.22
RPAP1-201ENST00000304330 ZNHIT6Q9NWK9 470 aaKnown RBP13.66□□□□□ -0.22
RPAP1-201ENST00000304330 MAP3K5Q99683 1374 aa13.66□□□□□ -0.22
RPAP1-201ENST00000304330 NOM1Q5C9Z4 860 aaKnown RBP13.66□□□□□ -0.22
RPAP1-201ENST00000304330 CLASP1Q7Z460 1538 aa13.66□□□□□ -0.22
RPAP1-201ENST00000304330 MPRIPQ6WCQ1 1025 aa13.66□□□□□ -0.22
RPAP1-201ENST00000304330 FERMT3Q86UX7 667 aa13.66□□□□□ -0.22
RPAP1-201ENST00000304330 C8orf76Q96K31 380 aa13.66□□□□□ -0.22
RPAP1-201ENST00000304330 UBAC1Q9BSL1 405 aa13.66□□□□□ -0.22
RPAP1-201ENST00000304330 PHAXQ9H814 394 aaKnown RBP13.66□□□□□ -0.22
RPAP1-201ENST00000304330 DYNC1I1O14576 645 aa13.66□□□□□ -0.22
RPAP1-201ENST00000304330 SEC24BO95487 1268 aa13.66□□□□□ -0.22
RPAP1-201ENST00000304330 KSR2Q6VAB6 950 aa13.66□□□□□ -0.22
RPAP1-201ENST00000304330 TSPYL6Q8N831 410 aa13.66□□□□□ -0.22
RPAP1-201ENST00000304330 PHACTR3Q96KR7 559 aa13.66□□□□□ -0.22
RPAP1-201ENST00000304330 ERLIN1O75477 346 aa13.65□□□□□ -0.22
RPAP1-201ENST00000304330 RRP12Q5JTH9 1297 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms