RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 USP16Q9Y5T5 823 aa27.87■■■□□ 2.05
SMAD1-201ENST00000302085 KSR2Q6VAB6 950 aa27.85■■■□□ 2.05
SMAD1-201ENST00000302085 ADAMTS2O95450 1211 aa27.84■■■□□ 2.05
SMAD1-201ENST00000302085 MAP3K2Q9Y2U5 619 aa27.84■■■□□ 2.05
SMAD1-201ENST00000302085 DISP2A7MBM2 1401 aa27.84■■■□□ 2.05
SMAD1-201ENST00000302085 HMMRO75330 724 aa27.82■■■□□ 2.04
SMAD1-201ENST00000302085 ATP8B2P98198 1209 aa27.82■■■□□ 2.04
SMAD1-201ENST00000302085 LRRFIP2Q9Y608 721 aaKnown RBP27.82■■■□□ 2.04
SMAD1-201ENST00000302085 SEC24BO95487 1268 aa27.81■■■□□ 2.04
SMAD1-201ENST00000302085 UBTFL1P0CB47 393 aaPredicted RBP27.81■■■□□ 2.04
SMAD1-201ENST00000302085 AIMP1Q12904 312 aaKnown RBP27.8■■■□□ 2.04
SMAD1-201ENST00000302085 IPO9Q96P70 1041 aaKnown RBP27.8■■■□□ 2.04
SMAD1-201ENST00000302085 GLI3P10071 1580 aa27.8■■■□□ 2.04
SMAD1-201ENST00000302085 MYL6BP14649 208 aa27.79■■■□□ 2.04
SMAD1-201ENST00000302085 NUTM2BA6NNL0 878 aaPredicted RBP27.79■■■□□ 2.04
SMAD1-201ENST00000302085 NUTM2EB1AL46 878 aaPredicted RBP27.79■■■□□ 2.04
SMAD1-201ENST00000302085 UBAP1LF5GYI3 381 aa27.79■■■□□ 2.04
SMAD1-201ENST00000302085 LRP10Q7Z4F1 713 aa27.79■■■□□ 2.04
SMAD1-201ENST00000302085 NUTM2AQ8IVF1 878 aaPredicted RBP27.79■■■□□ 2.04
SMAD1-201ENST00000302085 PNMA6EA0A0J9YXQ4 647 aa27.78■■■□□ 2.04
SMAD1-201ENST00000302085 DDX58O95786 925 aaKnown RBP27.78■■■□□ 2.04
SMAD1-201ENST00000302085 ALDH1L1O75891 902 aa27.77■■■□□ 2.04
SMAD1-201ENST00000302085 NBPF7P0C2Y1 421 aaPredicted RBP27.77■■■□□ 2.04
SMAD1-201ENST00000302085 XAGE3Q8WTP9 111 aa27.77■■■□□ 2.04
SMAD1-201ENST00000302085 PLCH1Q4KWH8 1693 aa27.76■■■□□ 2.04
SMAD1-201ENST00000302085 TOGARAM1Q9Y4F4 1720 aa27.76■■■□□ 2.03
SMAD1-201ENST00000302085 COPS6Q7L5N1 327 aa27.75■■■□□ 2.03
SMAD1-201ENST00000302085 C16orf71Q8IYS4 520 aaPredicted RBP27.75■■■□□ 2.03
SMAD1-201ENST00000302085 UBR2Q8IWV8 1755 aa27.75■■■□□ 2.03
SMAD1-201ENST00000302085 KCPQ6ZWJ8 1503 aa27.75■■■□□ 2.03
SMAD1-201ENST00000302085 PAPPAQ13219 1627 aa27.75■■■□□ 2.03
SMAD1-201ENST00000302085 PIP4K2AP48426 406 aaPredicted RBP27.75■■■□□ 2.03
SMAD1-201ENST00000302085 APBB1O00213 710 aa27.73■■■□□ 2.03
SMAD1-201ENST00000302085 SMARCA5O60264 1052 aaPredicted RBP27.73■■■□□ 2.03
SMAD1-201ENST00000302085 PLEKHM2Q8IWE5 1019 aa27.73■■■□□ 2.03
SMAD1-201ENST00000302085 TMOD3Q9NYL9 352 aa27.73■■■□□ 2.03
SMAD1-201ENST00000302085 EXOC5O00471 708 aa27.73■■■□□ 2.03
SMAD1-201ENST00000302085 LINS1Q8NG48 757 aa27.73■■■□□ 2.03
SMAD1-201ENST00000302085 TNS2Q63HR2 1409 aa27.73■■■□□ 2.03
SMAD1-201ENST00000302085 CWF19L2Q2TBE0 894 aaKnown RBP27.72■■■□□ 2.03
SMAD1-201ENST00000302085 BMP2KLQ5H9B9 411 aa27.72■■■□□ 2.03
SMAD1-201ENST00000302085 RIC3Q7Z5B4 369 aa27.72■■■□□ 2.03
SMAD1-201ENST00000302085 ZBTB47Q9UFB7 747 aaPredicted RBP27.72■■■□□ 2.03
SMAD1-201ENST00000302085 PTCD1O75127 700 aaKnown RBP27.71■■■□□ 2.03
SMAD1-201ENST00000302085 PIGBQ92521 554 aa27.71■■■□□ 2.03
SMAD1-201ENST00000302085 NRAPQ86VF7 1730 aa27.71■■■□□ 2.03
SMAD1-201ENST00000302085 SPATA31A1Q5TZJ5 1347 aa27.71■■■□□ 2.03
SMAD1-201ENST00000302085 SSH3Q8TE77 659 aa27.71■■■□□ 2.03
SMAD1-201ENST00000302085 LAMB4A4D0S4 1761 aa27.71■■■□□ 2.03
SMAD1-201ENST00000302085 NBPF26B4DH59 902 aa27.7■■■□□ 2.03
SMAD1-201ENST00000302085 NBPF14Q5TI25 921 aa27.7■■■□□ 2.03
SMAD1-201ENST00000302085 NBPF10Q6P3W6 841 aaKnown RBP27.7■■■□□ 2.03
SMAD1-201ENST00000302085 NBPF15Q8N660 670 aa27.7■■■□□ 2.03
SMAD1-201ENST00000302085 EXOC6BQ9Y2D4 811 aa27.7■■■□□ 2.03
SMAD1-201ENST00000302085 PPP1R42Q7Z4L9 355 aa27.69■■■□□ 2.02
SMAD1-201ENST00000302085 IGKV5-2P06315 115 aa27.69■■■□□ 2.02
SMAD1-201ENST00000302085 POLA2Q14181 598 aa27.69■■■□□ 2.02
SMAD1-201ENST00000302085 ANKRD13DQ6ZTN6 518 aa27.69■■■□□ 2.02
SMAD1-201ENST00000302085 OTUD7AQ8TE49 926 aaPredicted RBP27.69■■■□□ 2.02
SMAD1-201ENST00000302085 C9orf78Q9NZ63 289 aaPredicted RBP27.69■■■□□ 2.02
SMAD1-201ENST00000302085 ERBB4Q15303 1308 aa27.69■■■□□ 2.02
SMAD1-201ENST00000302085 BCL11AQ9H165 835 aa27.68■■■□□ 2.02
SMAD1-201ENST00000302085 METTL22Q9BUU2 404 aaPredicted RBP27.68■■■□□ 2.02
SMAD1-201ENST00000302085 THRAP3Q9Y2W1 955 aaKnown RBP27.68■■■□□ 2.02
SMAD1-201ENST00000302085 WNK3Q9BYP7 1800 aa27.67■■■□□ 2.02
SMAD1-201ENST00000302085 CDCA7Q9BWT1 371 aaPredicted RBP27.67■■■□□ 2.02
SMAD1-201ENST00000302085 ASAP1Q9ULH1 1129 aa27.67■■■□□ 2.02
SMAD1-201ENST00000302085 UTYO14607 1347 aa27.66■■■□□ 2.02
SMAD1-201ENST00000302085 SLIT2O94813 1529 aa27.66■■■□□ 2.02
SMAD1-201ENST00000302085 A1BGP04217 495 aa27.66■■■□□ 2.02
SMAD1-201ENST00000302085 IBTKQ9P2D0 1353 aaPredicted RBP27.65■■■□□ 2.02
SMAD1-201ENST00000302085 SPATA31A5Q5VU36 1347 aa27.65■■■□□ 2.02
SMAD1-201ENST00000302085 SPATA31A7Q8IWB4 1347 aa27.65■■■□□ 2.02
SMAD1-201ENST00000302085 ATG3Q9NT62 314 aa27.65■■■□□ 2.02
SMAD1-201ENST00000302085 NEXNQ0ZGT2 675 aa27.64■■■□□ 2.02
SMAD1-201ENST00000302085 ITGB4P16144 1822 aa27.64■■■□□ 2.01
SMAD1-201ENST00000302085 NEURL1BA8MQ27 555 aa27.64■■■□□ 2.01
SMAD1-201ENST00000302085 GRM8O00222 908 aa27.64■■■□□ 2.01
SMAD1-201ENST00000302085 MYD88Q99836 296 aa27.64■■■□□ 2.01
SMAD1-201ENST00000302085 SRGAP3O43295 1099 aa27.63■■■□□ 2.01
SMAD1-201ENST00000302085 LRRCC1Q9C099 1032 aa27.63■■■□□ 2.01
SMAD1-201ENST00000302085 GSPT1P15170 499 aaKnown RBP27.62■■■□□ 2.01
SMAD1-201ENST00000302085 MTX1Q13505 466 aa27.62■■■□□ 2.01
SMAD1-201ENST00000302085 TTC22Q5TAA0 569 aa27.62■■■□□ 2.01
SMAD1-201ENST00000302085 PLBD2Q8NHP8 589 aa27.62■■■□□ 2.01
SMAD1-201ENST00000302085 HDAC5Q9UQL6 1122 aa27.62■■■□□ 2.01
SMAD1-201ENST00000302085 NOP58Q9Y2X3 529 aaKnown RBP27.62■■■□□ 2.01
SMAD1-201ENST00000302085 NWD2Q9ULI1 1742 aa27.61■■■□□ 2.01
SMAD1-201ENST00000302085 LRP6O75581 1613 aa27.61■■■□□ 2.01
SMAD1-201ENST00000302085 BCL9O00512 1426 aa27.61■■■□□ 2.01
SMAD1-201ENST00000302085 GCKRQ14397 625 aa27.6■■■□□ 2.01
SMAD1-201ENST00000302085 DDRGK1Q96HY6 314 aa27.6■■■□□ 2.01
SMAD1-201ENST00000302085 KAZALD1Q96I82 304 aa27.6■■■□□ 2.01
SMAD1-201ENST00000302085 VSIG10Q8N0Z9 540 aa27.6■■■□□ 2.01
SMAD1-201ENST00000302085 SUCLG2Q96I99 432 aa27.6■■■□□ 2.01
SMAD1-201ENST00000302085 JCADQ9P266 1359 aa27.6■■■□□ 2.01
SMAD1-201ENST00000302085 SURF6O75683 361 aaKnown RBP27.59■■■□□ 2.01
SMAD1-201ENST00000302085 DDB1Q16531 1140 aa27.59■■■□□ 2.01
SMAD1-201ENST00000302085 UPF2Q9HAU5 1272 aaKnown RBP27.59■■■□□ 2.01
SMAD1-201ENST00000302085 RAB11FIP3O75154 756 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 357 ms