RNA–Protein interactions for RNA: ENST00000301071.11

TUBA1A-202, Transcript of tubulin alpha 1a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1A, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-202ENST00000301071 PHACTR3Q96KR7 559 aa11.19□□□□□ -0.62
TUBA1A-202ENST00000301071 CWC22Q9HCG8 908 aaKnown RBP11.19□□□□□ -0.62
TUBA1A-202ENST00000301071 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
TUBA1A-202ENST00000301071 CRB1P82279 1406 aa11.19□□□□□ -0.62
TUBA1A-202ENST00000301071 LETM1O95202 739 aaPredicted RBP11.19□□□□□ -0.62
TUBA1A-202ENST00000301071 NUCB1Q02818 461 aa11.19□□□□□ -0.62
TUBA1A-202ENST00000301071 ZSCAN23Q3MJ62 389 aa11.19□□□□□ -0.62
TUBA1A-202ENST00000301071 MEX3CQ5U5Q3 659 aaKnown RBP11.19□□□□□ -0.62
TUBA1A-202ENST00000301071 SAMD1Q6SPF0 538 aaPredicted RBP11.19□□□□□ -0.62
TUBA1A-202ENST00000301071 BCL9LQ86UU0 1499 aa11.18□□□□□ -0.62
TUBA1A-202ENST00000301071 FNBP4Q8N3X1 1017 aaPredicted RBP11.18□□□□□ -0.62
TUBA1A-202ENST00000301071 TCP11L2Q8N4U5 519 aa11.18□□□□□ -0.62
TUBA1A-202ENST00000301071 CARD10Q9BWT7 1032 aa11.18□□□□□ -0.62
TUBA1A-202ENST00000301071 PARP4Q9UKK3 1724 aaKnown RBP11.18□□□□□ -0.62
TUBA1A-202ENST00000301071 IPO8O15397 1037 aaKnown RBP11.17□□□□□ -0.62
TUBA1A-202ENST00000301071 SSFA2P28290 1259 aa11.17□□□□□ -0.62
TUBA1A-202ENST00000301071 KIAA2012Q0VF49 1180 aa11.17□□□□□ -0.62
TUBA1A-202ENST00000301071 RABEP1Q15276 862 aa11.17□□□□□ -0.62
TUBA1A-202ENST00000301071 MYRIPQ8NFW9 859 aa11.17□□□□□ -0.62
TUBA1A-202ENST00000301071 MEGF6O75095 1541 aa11.17□□□□□ -0.62
TUBA1A-202ENST00000301071 UNC5CLQ8IV45 518 aa11.17□□□□□ -0.62
TUBA1A-202ENST00000301071 RRP7AQ9Y3A4 280 aaKnown RBP11.17□□□□□ -0.62
TUBA1A-202ENST00000301071 PKD1L3Q7Z443 1732 aa11.16□□□□□ -0.62
TUBA1A-202ENST00000301071 MBD3O95983 291 aa11.16□□□□□ -0.62
TUBA1A-202ENST00000301071 TMPOP42166 694 aaKnown RBP11.16□□□□□ -0.62
TUBA1A-202ENST00000301071 LRSAM1Q6UWE0 723 aa11.16□□□□□ -0.62
TUBA1A-202ENST00000301071 GCC1Q96CN9 775 aa11.16□□□□□ -0.62
TUBA1A-202ENST00000301071 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.16□□□□□ -0.62
TUBA1A-202ENST00000301071 NEUROD2Q15784 382 aa11.15□□□□□ -0.62
TUBA1A-202ENST00000301071 CAVIN1Q6NZI2 390 aaKnown RBP11.15□□□□□ -0.62
TUBA1A-202ENST00000301071 CHD1LQ86WJ1 897 aa11.15□□□□□ -0.62
TUBA1A-202ENST00000301071 USP21Q9UK80 565 aa11.15□□□□□ -0.62
TUBA1A-202ENST00000301071 AFF2P51816 1311 aa11.15□□□□□ -0.62
TUBA1A-202ENST00000301071 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.62
TUBA1A-202ENST00000301071 GTF2F1P35269 517 aaKnown RBP eCLIP11.15□□□□□ -0.62
TUBA1A-202ENST00000301071 NFE2L2Q16236 605 aa11.15□□□□□ -0.62
TUBA1A-202ENST00000301071 MTHFSDQ2M296 383 aaKnown RBP11.15□□□□□ -0.62
TUBA1A-202ENST00000301071 ATF7IPQ6VMQ6 1270 aa11.15□□□□□ -0.62
TUBA1A-202ENST00000301071 KIF2CQ99661 725 aa11.15□□□□□ -0.62
TUBA1A-202ENST00000301071 RBSNQ9H1K0 784 aa11.15□□□□□ -0.62
TUBA1A-202ENST00000301071 LMBRD1Q9NUN5 540 aa11.15□□□□□ -0.62
TUBA1A-202ENST00000301071 IL16Q14005 1332 aa11.14□□□□□ -0.63
TUBA1A-202ENST00000301071 SPATA31A1Q5TZJ5 1347 aa11.14□□□□□ -0.63
TUBA1A-202ENST00000301071 SPATA31A5Q5VU36 1347 aa11.14□□□□□ -0.63
TUBA1A-202ENST00000301071 SPATA31A7Q8IWB4 1347 aa11.14□□□□□ -0.63
TUBA1A-202ENST00000301071 MCTP1Q6DN14 999 aa11.14□□□□□ -0.63
TUBA1A-202ENST00000301071 ITPRIPQ8IWB1 547 aa11.14□□□□□ -0.63
TUBA1A-202ENST00000301071 RAPGEF4Q8WZA2 1011 aa11.14□□□□□ -0.63
TUBA1A-202ENST00000301071 SYAP1Q96A49 352 aaPredicted RBP11.14□□□□□ -0.63
TUBA1A-202ENST00000301071 SMC4Q9NTJ3 1288 aa11.14□□□□□ -0.63
TUBA1A-202ENST00000301071 A0A0U1RQG5 324 aaPredicted RBP11.13□□□□□ -0.63
TUBA1A-202ENST00000301071 CYP2E1P05181 493 aaPredicted RBP11.13□□□□□ -0.63
TUBA1A-202ENST00000301071 TATP17735 454 aaPredicted RBP11.13□□□□□ -0.63
TUBA1A-202ENST00000301071 CDK11BP21127 795 aaKnown RBP11.13□□□□□ -0.63
TUBA1A-202ENST00000301071 VPS72Q15906 364 aa11.13□□□□□ -0.63
TUBA1A-202ENST00000301071 DHX37Q8IY37 1157 aaKnown RBP11.13□□□□□ -0.63
TUBA1A-202ENST00000301071 OVOS2A0A0G2JMS6 1433 aa11.13□□□□□ -0.63
TUBA1A-202ENST00000301071 DISP2A7MBM2 1401 aa11.13□□□□□ -0.63
TUBA1A-202ENST00000301071 CDC45O75419 566 aa11.13□□□□□ -0.63
TUBA1A-202ENST00000301071 ZSCAN20P17040 1043 aaPredicted RBP11.13□□□□□ -0.63
TUBA1A-202ENST00000301071 GAS2L2Q8NHY3 880 aa11.13□□□□□ -0.63
TUBA1A-202ENST00000301071 ZBTB40Q9NUA8 1239 aa11.13□□□□□ -0.63
TUBA1A-202ENST00000301071 TRIM35Q9UPQ4 493 aa11.13□□□□□ -0.63
TUBA1A-202ENST00000301071 TNNQ9UQP3 1299 aa11.13□□□□□ -0.63
TUBA1A-202ENST00000301071 PHF14O94880 888 aa11.12□□□□□ -0.63
TUBA1A-202ENST00000301071 PTMAP06454 111 aaKnown RBP11.12□□□□□ -0.63
TUBA1A-202ENST00000301071 TRIM27P14373 513 aa11.12□□□□□ -0.63
TUBA1A-202ENST00000301071 HSP90B1P14625 803 aaKnown RBP11.12□□□□□ -0.63
TUBA1A-202ENST00000301071 IL2RBP14784 551 aa11.12□□□□□ -0.63
TUBA1A-202ENST00000301071 UVSSAQ2YD98 709 aa11.12□□□□□ -0.63
TUBA1A-202ENST00000301071 PLEKHO1Q53GL0 409 aaPredicted RBP11.12□□□□□ -0.63
TUBA1A-202ENST00000301071 ZNF428Q96B54 188 aa11.12□□□□□ -0.63
TUBA1A-202ENST00000301071 BCL2L13Q9BXK5 485 aa11.12□□□□□ -0.63
TUBA1A-202ENST00000301071 CCDC9Q9Y3X0 531 aaKnown RBP11.12□□□□□ -0.63
TUBA1A-202ENST00000301071 PLEKHG2Q9H7P9 1386 aa11.12□□□□□ -0.63
TUBA1A-202ENST00000301071 GLI3P10071 1580 aa11.12□□□□□ -0.63
TUBA1A-202ENST00000301071 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
TUBA1A-202ENST00000301071 AMOTQ4VCS5 1084 aa11.11□□□□□ -0.63
TUBA1A-202ENST00000301071 FAM184AQ8NB25 1140 aa11.11□□□□□ -0.63
TUBA1A-202ENST00000301071 ATRNO75882 1429 aa11.11□□□□□ -0.63
TUBA1A-202ENST00000301071 ALDH1L2Q3SY69 923 aa11.11□□□□□ -0.63
TUBA1A-202ENST00000301071 DNTTIP2Q5QJE6 756 aaKnown RBP11.11□□□□□ -0.63
TUBA1A-202ENST00000301071 THRAP3Q9Y2W1 955 aaKnown RBP11.11□□□□□ -0.63
TUBA1A-202ENST00000301071 KAT6BQ8WYB5 2073 aa11.11□□□□□ -0.63
TUBA1A-202ENST00000301071 SCN11AQ9UI33 1791 aa11.1□□□□□ -0.63
TUBA1A-202ENST00000301071 ST18O60284 1047 aa11.1□□□□□ -0.63
TUBA1A-202ENST00000301071 ZNF530Q6P9A1 599 aaPredicted RBP11.1□□□□□ -0.63
TUBA1A-202ENST00000301071 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.1□□□□□ -0.63
TUBA1A-202ENST00000301071 BCCIPQ9P287 314 aaKnown RBP eCLIP11.1□□□□□ -0.63
TUBA1A-202ENST00000301071 ZHX1Q9UKY1 873 aaPredicted RBP11.1□□□□□ -0.63
TUBA1A-202ENST00000301071 LRRC37A3O60309 1634 aa11.1□□□□□ -0.63
TUBA1A-202ENST00000301071 DCTN1Q14203 1278 aa11.09□□□□□ -0.63
TUBA1A-202ENST00000301071 TBC1D9Q6ZT07 1266 aa11.09□□□□□ -0.63
TUBA1A-202ENST00000301071 BARGINQ6ZT62 677 aa11.09□□□□□ -0.63
TUBA1A-202ENST00000301071 TRPC5Q9UL62 973 aaPredicted RBP11.09□□□□□ -0.63
TUBA1A-202ENST00000301071 SPG7Q9UQ90 795 aa11.09□□□□□ -0.63
TUBA1A-202ENST00000301071 MAP3K5Q99683 1374 aa11.09□□□□□ -0.63
TUBA1A-202ENST00000301071 ADAMTS7Q9UKP4 1686 aa11.09□□□□□ -0.63
TUBA1A-202ENST00000301071 GNAT3A8MTJ3 354 aa11.09□□□□□ -0.63
TUBA1A-202ENST00000301071 TPM3P06753 285 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms