RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 RGS12O14924 1447 aa31.39■■■□□ 2.62
GTF2A1-201ENST00000298173 LAMB4A4D0S4 1761 aa31.38■■■□□ 2.61
GTF2A1-201ENST00000298173 PTCD1O75127 700 aaKnown RBP31.38■■■□□ 2.61
GTF2A1-201ENST00000298173 VSIG10Q8N0Z9 540 aa31.38■■■□□ 2.61
GTF2A1-201ENST00000298173 ABCC4O15439 1325 aa31.37■■■□□ 2.61
GTF2A1-201ENST00000298173 FLIIQ13045 1269 aa31.37■■■□□ 2.61
GTF2A1-201ENST00000298173 PDIA6Q15084 440 aa31.37■■■□□ 2.61
GTF2A1-201ENST00000298173 MVPQ14764 893 aaKnown RBP31.36■■■□□ 2.61
GTF2A1-201ENST00000298173 KCNQ2O43526 872 aa31.35■■■□□ 2.61
GTF2A1-201ENST00000298173 TMEM57Q8N5G2 664 aa31.35■■■□□ 2.61
GTF2A1-201ENST00000298173 PHAXQ9H814 394 aaKnown RBP31.35■■■□□ 2.61
GTF2A1-201ENST00000298173 DDX21Q9NR30 783 aaKnown RBP eCLIP31.35■■■□□ 2.615e-8■□□□□ 8.1
GTF2A1-201ENST00000298173 RGS17Q9UGC6 210 aaPredicted RBP31.35■■■□□ 2.61
GTF2A1-201ENST00000298173 BRWD3Q6RI45 1802 aa31.34■■■□□ 2.61
GTF2A1-201ENST00000298173 PROSER3Q2NL68 480 aa31.32■■■□□ 2.6
GTF2A1-201ENST00000298173 HYPKQ9NX55 129 aa31.32■■■□□ 2.6
GTF2A1-201ENST00000298173 SBF2Q86WG5 1849 aa31.31■■■□□ 2.6
GTF2A1-201ENST00000298173 ANXA1P04083 346 aa31.31■■■□□ 2.6
GTF2A1-201ENST00000298173 FAM182BQ5T319 152 aa31.31■■■□□ 2.6
GTF2A1-201ENST00000298173 SLC4A9Q96Q91 983 aa31.31■■■□□ 2.6
GTF2A1-201ENST00000298173 LRP10Q7Z4F1 713 aa31.3■■■□□ 2.6
GTF2A1-201ENST00000298173 TEX13AQ9BXU3 409 aaPredicted RBP31.3■■■□□ 2.6
GTF2A1-201ENST00000298173 ERBB4Q15303 1308 aa31.29■■■□□ 2.6
GTF2A1-201ENST00000298173 NHSQ6T4R5 1651 aa31.29■■■□□ 2.6
GTF2A1-201ENST00000298173 AAMPQ13685 434 aa31.29■■■□□ 2.6
GTF2A1-201ENST00000298173 INTS3Q68E01 1043 aaKnown RBP31.29■■■□□ 2.6
GTF2A1-201ENST00000298173 RBM42Q9BTD8 480 aaKnown RBP31.29■■■□□ 2.6
GTF2A1-201ENST00000298173 DDX19BQ9UMR2 479 aa31.29■■■□□ 2.6
GTF2A1-201ENST00000298173 FKBP5Q13451 457 aaPredicted RBP31.28■■■□□ 2.6
GTF2A1-201ENST00000298173 ITPRIPQ8IWB1 547 aa31.27■■■□□ 2.6
GTF2A1-201ENST00000298173 KRT27Q7Z3Y8 459 aa31.26■■■□□ 2.6
GTF2A1-201ENST00000298173 F6X3S4 739 aa31.25■■■□□ 2.59
GTF2A1-201ENST00000298173 RXRBP28702 533 aa31.25■■■□□ 2.59
GTF2A1-201ENST00000298173 PTF1AQ7RTS3 328 aa31.25■■■□□ 2.59
GTF2A1-201ENST00000298173 DNAJC10Q8IXB1 793 aa31.25■■■□□ 2.59
GTF2A1-201ENST00000298173 SMARCC1Q92922 1105 aaPredicted RBP31.25■■■□□ 2.59
GTF2A1-201ENST00000298173 NBPF26B4DH59 902 aa31.24■■■□□ 2.59
GTF2A1-201ENST00000298173 NBPF14Q5TI25 921 aa31.24■■■□□ 2.59
GTF2A1-201ENST00000298173 B4GALNT3Q6L9W6 998 aa31.24■■■□□ 2.59
GTF2A1-201ENST00000298173 NBPF10Q6P3W6 841 aaKnown RBP31.24■■■□□ 2.59
GTF2A1-201ENST00000298173 NBPF15Q8N660 670 aa31.24■■■□□ 2.59
GTF2A1-201ENST00000298173 BTAF1O14981 1849 aa31.23■■■□□ 2.59
GTF2A1-201ENST00000298173 PALLDQ8WX93 1383 aa31.23■■■□□ 2.59
GTF2A1-201ENST00000298173 TJP1Q07157 1748 aa31.23■■■□□ 2.59
GTF2A1-201ENST00000298173 ZBTB7BO15156 539 aaPredicted RBP31.22■■■□□ 2.59
GTF2A1-201ENST00000298173 A1BGP04217 495 aa31.22■■■□□ 2.59
GTF2A1-201ENST00000298173 CICQ96RK0 1608 aaPredicted RBP31.22■■■□□ 2.59
GTF2A1-201ENST00000298173 POTEAQ6S8J7 498 aa31.22■■■□□ 2.59
GTF2A1-201ENST00000298173 MYL6BP14649 208 aa31.21■■■□□ 2.59
GTF2A1-201ENST00000298173 ZNF831Q5JPB2 1677 aa31.21■■■□□ 2.59
GTF2A1-201ENST00000298173 LOC102724428A0A0B4J2F2 783 aa31.2■■■□□ 2.59
GTF2A1-201ENST00000298173 STARD3NLO95772 234 aa31.2■■■□□ 2.59
GTF2A1-201ENST00000298173 SIK1P57059 783 aa31.2■■■□□ 2.59
GTF2A1-201ENST00000298173 FAM196AQ6ZSG2 479 aa31.2■■■□□ 2.59
GTF2A1-201ENST00000298173 CCDC136Q96JN2 1154 aa31.2■■■□□ 2.59
GTF2A1-201ENST00000298173 ZBTB40Q9NUA8 1239 aa31.2■■■□□ 2.59
GTF2A1-201ENST00000298173 ADCY9O60503 1353 aa31.2■■■□□ 2.58
GTF2A1-201ENST00000298173 PI4KAP2A4QPH2 592 aa31.19■■■□□ 2.58
GTF2A1-201ENST00000298173 CYP19A1P11511 503 aaPredicted RBP31.19■■■□□ 2.58
GTF2A1-201ENST00000298173 PIP4K2AP48426 406 aaPredicted RBP31.19■■■□□ 2.58
GTF2A1-201ENST00000298173 PI4KAP1Q8N8J0 262 aa31.19■■■□□ 2.58
GTF2A1-201ENST00000298173 N4BP2Q86UW6 1770 aaPredicted RBP31.19■■■□□ 2.58
GTF2A1-201ENST00000298173 PXDNLA1KZ92 1463 aa31.19■■■□□ 2.58
GTF2A1-201ENST00000298173 CCT4P50991 539 aaKnown RBP31.19■■■□□ 2.58
GTF2A1-201ENST00000298173 KSR2Q6VAB6 950 aa31.19■■■□□ 2.58
GTF2A1-201ENST00000298173 COPS6Q7L5N1 327 aa31.18■■■□□ 2.58
GTF2A1-201ENST00000298173 SLC4A10Q6U841 1118 aa31.17■■■□□ 2.58
GTF2A1-201ENST00000298173 XAGE3Q8WTP9 111 aa31.17■■■□□ 2.58
GTF2A1-201ENST00000298173 DNAAF4Q8WXU2 420 aa31.16■■■□□ 2.58
GTF2A1-201ENST00000298173 BCL11BQ9C0K0 894 aaPredicted RBP31.16■■■□□ 2.58
GTF2A1-201ENST00000298173 CHMP4BQ9H444 224 aaKnown RBP31.16■■■□□ 2.58
GTF2A1-201ENST00000298173 ATP6V1AP38606 617 aa31.16■■■□□ 2.58
GTF2A1-201ENST00000298173 DDX58O95786 925 aaKnown RBP31.15■■■□□ 2.58
GTF2A1-201ENST00000298173 AIMP1Q12904 312 aaKnown RBP31.15■■■□□ 2.58
GTF2A1-201ENST00000298173 ITPK1Q13572 414 aa31.13■■■□□ 2.57
GTF2A1-201ENST00000298173 MAP3K2Q9Y2U5 619 aa31.13■■■□□ 2.57
GTF2A1-201ENST00000298173 PCDHB15Q9Y5E8 787 aa31.13■■■□□ 2.57
GTF2A1-201ENST00000298173 ATP10DQ9P241 1426 aa31.12■■■□□ 2.57
GTF2A1-201ENST00000298173 BEND3Q5T5X7 828 aa31.12■■■□□ 2.57
GTF2A1-201ENST00000298173 ANKRD13DQ6ZTN6 518 aa31.12■■■□□ 2.57
GTF2A1-201ENST00000298173 LY75O60449 1722 aa31.1■■■□□ 2.57
GTF2A1-201ENST00000298173 COL5A3P25940 1745 aaPredicted RBP31.1■■■□□ 2.57
GTF2A1-201ENST00000298173 RREB1Q92766 1687 aa31.08■■■□□ 2.57
GTF2A1-201ENST00000298173 INTS5Q6P9B9 1019 aaKnown RBP31.08■■■□□ 2.57
GTF2A1-201ENST00000298173 PLBD2Q8NHP8 589 aa31.08■■■□□ 2.57
GTF2A1-201ENST00000298173 SRCIN1Q9C0H9 1055 aa31.08■■■□□ 2.57
GTF2A1-201ENST00000298173 MYH14Q7Z406 1995 aaKnown RBP31.08■■■□□ 2.57
GTF2A1-201ENST00000298173 RIC3Q7Z5B4 369 aa31.07■■■□□ 2.56
GTF2A1-201ENST00000298173 ZBTB1Q9Y2K1 713 aa31.07■■■□□ 2.56
GTF2A1-201ENST00000298173 TTLL7Q6ZT98 887 aa31.06■■■□□ 2.56
GTF2A1-201ENST00000298173 MEIS3Q99687 375 aa31.06■■■□□ 2.56
GTF2A1-201ENST00000298173 METTL22Q9BUU2 404 aaPredicted RBP31.06■■■□□ 2.56
GTF2A1-201ENST00000298173 IL6STP40189 918 aaPredicted RBP31.05■■■□□ 2.56
GTF2A1-201ENST00000298173 ARFGEF2Q9Y6D5 1785 aa31.05■■■□□ 2.56
GTF2A1-201ENST00000298173 KDM2BQ8NHM5 1336 aa31.04■■■□□ 2.56
GTF2A1-201ENST00000298173 CRKLP46109 303 aaKnown RBP31.04■■■□□ 2.56
GTF2A1-201ENST00000298173 USP44Q9H0E7 712 aa31.04■■■□□ 2.56
GTF2A1-201ENST00000298173 CCDC87Q9NVE4 849 aa31.04■■■□□ 2.56
GTF2A1-201ENST00000298173 IBTKQ9P2D0 1353 aaPredicted RBP31.04■■■□□ 2.56
GTF2A1-201ENST00000298173 ALDH1L1O75891 902 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms