RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 SAMD9LQ8IVG5 1584 aa12.05□□□□□ -0.48
CLDN1-201ENST00000295522 ERO1AQ96HE7 468 aa12.05□□□□□ -0.48
CLDN1-201ENST00000295522 LMAN1P49257 510 aa12.04□□□□□ -0.48
CLDN1-201ENST00000295522 CWC27Q6UX04 472 aaKnown RBP12.04□□□□□ -0.48
CLDN1-201ENST00000295522 ABCC4O15439 1325 aa12.04□□□□□ -0.48
CLDN1-201ENST00000295522 CCDC69A6NI79 296 aa12.04□□□□□ -0.48
CLDN1-201ENST00000295522 CHMLP26374 656 aa12.04□□□□□ -0.48
CLDN1-201ENST00000295522 STK3Q13188 491 aa12.04□□□□□ -0.48
CLDN1-201ENST00000295522 ARHGAP31Q2M1Z3 1444 aa12.04□□□□□ -0.48
CLDN1-201ENST00000295522 UBXN4Q92575 508 aa12.04□□□□□ -0.48
CLDN1-201ENST00000295522 ARGLU1Q9NWB6 273 aaPredicted RBP12.04□□□□□ -0.48
CLDN1-201ENST00000295522 UNC5CLQ8IV45 518 aa12.03□□□□□ -0.48
CLDN1-201ENST00000295522 SPATA32Q96LK8 384 aa12.03□□□□□ -0.48
CLDN1-201ENST00000295522 TCEANC2Q96MN5 208 aa12.03□□□□□ -0.48
CLDN1-201ENST00000295522 LIMCH1Q9UPQ0 1083 aa12.03□□□□□ -0.48
CLDN1-201ENST00000295522 SLC4A2P04920 1241 aa12.03□□□□□ -0.48
CLDN1-201ENST00000295522 ZRSR1Q15695 479 aaKnown RBP12.03□□□□□ -0.48
CLDN1-201ENST00000295522 ZNF428Q96B54 188 aa12.03□□□□□ -0.48
CLDN1-201ENST00000295522 LRRCC1Q9C099 1032 aa12.03□□□□□ -0.48
CLDN1-201ENST00000295522 MIS18AQ9NYP9 233 aa12.03□□□□□ -0.48
CLDN1-201ENST00000295522 SOX12O15370 315 aa12.03□□□□□ -0.48
CLDN1-201ENST00000295522 SEC31AO94979 1220 aaKnown RBP12.03□□□□□ -0.48
CLDN1-201ENST00000295522 TPM4P67936 248 aa12.03□□□□□ -0.48
CLDN1-201ENST00000295522 SNW1Q13573 536 aaKnown RBP12.03□□□□□ -0.48
CLDN1-201ENST00000295522 NFE2L2Q16236 605 aa12.03□□□□□ -0.48
CLDN1-201ENST00000295522 TCHHQ07283 1943 aa12.02□□□□□ -0.48
CLDN1-201ENST00000295522 SYCP1Q15431 976 aa12.02□□□□□ -0.48
CLDN1-201ENST00000295522 JAKMIP1Q96N16 626 aaKnown RBP12.02□□□□□ -0.48
CLDN1-201ENST00000295522 LAMC1P11047 1609 aa12.02□□□□□ -0.48
CLDN1-201ENST00000295522 RAD50Q92878 1312 aa12.02□□□□□ -0.48
CLDN1-201ENST00000295522 CYP2C19P33261 490 aa12.02□□□□□ -0.49
CLDN1-201ENST00000295522 CLCN6P51797 869 aa12.02□□□□□ -0.49
CLDN1-201ENST00000295522 TTC6Q86TZ1 520 aa12.02□□□□□ -0.49
CLDN1-201ENST00000295522 SECISBP2LQ93073 1101 aaKnown RBP12.02□□□□□ -0.49
CLDN1-201ENST00000295522 MSH6P52701 1360 aa12.02□□□□□ -0.49
CLDN1-201ENST00000295522 LARGE1O95461 756 aa12.02□□□□□ -0.49
CLDN1-201ENST00000295522 ST5P78524 1137 aa12.02□□□□□ -0.49
CLDN1-201ENST00000295522 ERCC4Q92889 916 aaPredicted RBP12.02□□□□□ -0.49
CLDN1-201ENST00000295522 CCDC171Q6TFL3 1326 aa12.01□□□□□ -0.49
CLDN1-201ENST00000295522 FCHSD2O94868 740 aa12.01□□□□□ -0.49
CLDN1-201ENST00000295522 SMC2O95347 1197 aa12.01□□□□□ -0.49
CLDN1-201ENST00000295522 LOC102724159A0A0B4J2E5 919 aa12.01□□□□□ -0.49
CLDN1-201ENST00000295522 URI1O94763 535 aaPredicted RBP12.01□□□□□ -0.49
CLDN1-201ENST00000295522 PWP2Q15269 919 aaKnown RBP12.01□□□□□ -0.49
CLDN1-201ENST00000295522 ZSCAN26Q16670 478 aa12.01□□□□□ -0.49
CLDN1-201ENST00000295522 LRRC8AQ8IWT6 810 aa12.01□□□□□ -0.49
CLDN1-201ENST00000295522 GOLGA6L1Q8N7Z2 621 aa12.01□□□□□ -0.49
CLDN1-201ENST00000295522 LRRN4CLQ8ND94 238 aa12.01□□□□□ -0.49
CLDN1-201ENST00000295522 FUCA2Q9BTY2 467 aa12.01□□□□□ -0.49
CLDN1-201ENST00000295522 ZNF446Q9NWS9 450 aa12.01□□□□□ -0.49
CLDN1-201ENST00000295522 TERF2IPQ9NYB0 399 aa12.01□□□□□ -0.49
CLDN1-201ENST00000295522 RPAP1Q9BWH6 1393 aaPredicted RBP12.01□□□□□ -0.49
CLDN1-201ENST00000295522 ANKRD65E5RJM6 399 aa12.01□□□□□ -0.49
CLDN1-201ENST00000295522 OS9Q13438 667 aaPredicted RBP12.01□□□□□ -0.49
CLDN1-201ENST00000295522 DRC1Q96MC2 740 aa12.01□□□□□ -0.49
CLDN1-201ENST00000295522 EPC1Q9H2F5 836 aa12.01□□□□□ -0.49
CLDN1-201ENST00000295522 PNMA6AP0CW24 399 aaPredicted RBP12□□□□□ -0.49
CLDN1-201ENST00000295522 IL25Q9H293 177 aa12□□□□□ -0.49
CLDN1-201ENST00000295522 CWC15Q9P013 229 aaKnown RBP12□□□□□ -0.49
CLDN1-201ENST00000295522 FYB1O15117 783 aa12□□□□□ -0.49
CLDN1-201ENST00000295522 NRDCO43847 1150 aa12□□□□□ -0.49
CLDN1-201ENST00000295522 ANAPC15P60006 121 aa12□□□□□ -0.49
CLDN1-201ENST00000295522 RUFY3Q7L099 469 aa12□□□□□ -0.49
CLDN1-201ENST00000295522 TXLNBQ8N3L3 684 aa12□□□□□ -0.49
CLDN1-201ENST00000295522 RGS22Q8NE09 1264 aa12□□□□□ -0.49
CLDN1-201ENST00000295522 PDRG1Q9NUG6 133 aa12□□□□□ -0.49
CLDN1-201ENST00000295522 DNAI1Q9UI46 699 aa12□□□□□ -0.49
CLDN1-201ENST00000295522 MYOM1P52179 1685 aa12□□□□□ -0.49
CLDN1-201ENST00000295522 MYO1CO00159 1063 aa11.99□□□□□ -0.49
CLDN1-201ENST00000295522 PPFIA3O75145 1194 aa11.99□□□□□ -0.49
CLDN1-201ENST00000295522 PRPF40BQ6NWY9 871 aaKnown RBP11.99□□□□□ -0.49
CLDN1-201ENST00000295522 RASEFQ8IZ41 740 aa11.99□□□□□ -0.49
CLDN1-201ENST00000295522 SMARCE1Q969G3 411 aa11.99□□□□□ -0.49
CLDN1-201ENST00000295522 RGS12O14924 1447 aa11.99□□□□□ -0.49
CLDN1-201ENST00000295522 HDGFL2Q7Z4V5 671 aaPredicted RBP11.99□□□□□ -0.49
CLDN1-201ENST00000295522 MTMR6Q9Y217 621 aa11.99□□□□□ -0.49
CLDN1-201ENST00000295522 TULP2O00295 520 aa11.99□□□□□ -0.49
CLDN1-201ENST00000295522 OAS2P29728 719 aaKnown RBP11.99□□□□□ -0.49
CLDN1-201ENST00000295522 CDC37L1Q7L3B6 337 aa11.99□□□□□ -0.49
CLDN1-201ENST00000295522 TMEM87AQ8NBN3 555 aa11.99□□□□□ -0.49
CLDN1-201ENST00000295522 ZSWIM4Q9H7M6 989 aa11.99□□□□□ -0.49
CLDN1-201ENST00000295522 LCMT1Q9UIC8 334 aa11.99□□□□□ -0.49
CLDN1-201ENST00000295522 NR1I2O75469 434 aa11.98□□□□□ -0.49
CLDN1-201ENST00000295522 MCM10Q7L590 875 aa11.98□□□□□ -0.49
CLDN1-201ENST00000295522 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.98□□□□□ -0.49
CLDN1-201ENST00000295522 EMILIN1Q9Y6C2 1016 aa11.98□□□□□ -0.49
CLDN1-201ENST00000295522 MADDQ8WXG6 1647 aa11.98□□□□□ -0.49
CLDN1-201ENST00000295522 SNX14Q9Y5W7 946 aa11.98□□□□□ -0.49
CLDN1-201ENST00000295522 DDX11Q96FC9 970 aa11.98□□□□□ -0.49
CLDN1-201ENST00000295522 UGGT1Q9NYU2 1555 aa11.97□□□□□ -0.49
CLDN1-201ENST00000295522 H3BQV1 296 aa11.97□□□□□ -0.49
CLDN1-201ENST00000295522 GNAI2P04899 355 aa11.97□□□□□ -0.49
CLDN1-201ENST00000295522 IFFO2Q5TF58 517 aa11.97□□□□□ -0.49
CLDN1-201ENST00000295522 AK7Q96M32 723 aa11.97□□□□□ -0.49
CLDN1-201ENST00000295522 SHPRHQ149N8 1683 aa11.97□□□□□ -0.49
CLDN1-201ENST00000295522 HSP90B1P14625 803 aaKnown RBP11.97□□□□□ -0.49
CLDN1-201ENST00000295522 SLC20A2Q08357 652 aa11.97□□□□□ -0.49
CLDN1-201ENST00000295522 LEKR1Q6ZMV7 388 aa11.97□□□□□ -0.49
CLDN1-201ENST00000295522 CEP152O94986 1710 aa11.97□□□□□ -0.49
CLDN1-201ENST00000295522 SURF6O75683 361 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms