RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 BEND3Q5T5X7 828 aa12.77□□□□□ -0.36
SEC24D-201ENST00000280551 IPO9Q96P70 1041 aaKnown RBP12.77□□□□□ -0.36
SEC24D-201ENST00000280551 MPRIPQ6WCQ1 1025 aa12.77□□□□□ -0.37
SEC24D-201ENST00000280551 ZNF790Q6PG37 636 aa12.77□□□□□ -0.37
SEC24D-201ENST00000280551 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
SEC24D-201ENST00000280551 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
SEC24D-201ENST00000280551 STK31Q9BXU1 1019 aa12.76□□□□□ -0.37
SEC24D-201ENST00000280551 DBF4Q9UBU7 674 aaPredicted RBP12.76□□□□□ -0.37
SEC24D-201ENST00000280551 MEIS3Q99687 375 aa12.76□□□□□ -0.37
SEC24D-201ENST00000280551 NHSQ6T4R5 1651 aa12.76□□□□□ -0.37
SEC24D-201ENST00000280551 MYH3P11055 1940 aa12.75□□□□□ -0.37
SEC24D-201ENST00000280551 USP44Q9H0E7 712 aa12.75□□□□□ -0.37
SEC24D-201ENST00000280551 SBF2Q86WG5 1849 aa12.75□□□□□ -0.37
SEC24D-201ENST00000280551 HDGFL1Q5TGJ6 251 aa12.75□□□□□ -0.37
SEC24D-201ENST00000280551 DDX21Q9NR30 783 aaKnown RBP eCLIP12.75□□□□□ -0.37
SEC24D-201ENST00000280551 LY75O60449 1722 aa12.75□□□□□ -0.37
SEC24D-201ENST00000280551 ALDH1L1O75891 902 aa12.74□□□□□ -0.37
SEC24D-201ENST00000280551 TEFQ10587 303 aa12.74□□□□□ -0.37
SEC24D-201ENST00000280551 NUP98P52948 1817 aa12.74□□□□□ -0.37
SEC24D-201ENST00000280551 SSH3Q8TE77 659 aa12.74□□□□□ -0.37
SEC24D-201ENST00000280551 HYPKQ9NX55 129 aa12.74□□□□□ -0.37
SEC24D-201ENST00000280551 GNAI3P08754 354 aa12.74□□□□□ -0.37
SEC24D-201ENST00000280551 ATP8B2P98198 1209 aa12.74□□□□□ -0.37
SEC24D-201ENST00000280551 IL27Q8NEV9 243 aa12.74□□□□□ -0.37
SEC24D-201ENST00000280551 ARAP2Q8WZ64 1704 aa12.73□□□□□ -0.37
SEC24D-201ENST00000280551 SEC24BO95487 1268 aa12.73□□□□□ -0.37
SEC24D-201ENST00000280551 LRP5O75197 1615 aa12.73□□□□□ -0.37
SEC24D-201ENST00000280551 BCL9O00512 1426 aa12.73□□□□□ -0.37
SEC24D-201ENST00000280551 CHRNA2Q15822 529 aa12.73□□□□□ -0.37
SEC24D-201ENST00000280551 CHPF2Q9P2E5 772 aa12.73□□□□□ -0.37
SEC24D-201ENST00000280551 AOX1Q06278 1338 aa12.73□□□□□ -0.37
SEC24D-201ENST00000280551 USP42Q9H9J4 1324 aaKnown RBP12.73□□□□□ -0.37
SEC24D-201ENST00000280551 IL17RAQ96F46 866 aa12.72□□□□□ -0.37
SEC24D-201ENST00000280551 A0A1B0GUL6 1792 aa12.72□□□□□ -0.37
SEC24D-201ENST00000280551 IL2RBP14784 551 aa12.72□□□□□ -0.37
SEC24D-201ENST00000280551 PHAXQ9H814 394 aaKnown RBP12.72□□□□□ -0.37
SEC24D-201ENST00000280551 NLRP2Q9NX02 1062 aa12.72□□□□□ -0.37
SEC24D-201ENST00000280551 RTL5Q5HYW3 569 aaPredicted RBP12.72□□□□□ -0.37
SEC24D-201ENST00000280551 TBC1D32Q96NH3 1257 aa12.72□□□□□ -0.37
SEC24D-201ENST00000280551 GNAI2P04899 355 aa12.72□□□□□ -0.37
SEC24D-201ENST00000280551 KSR2Q6VAB6 950 aa12.71□□□□□ -0.37
SEC24D-201ENST00000280551 PLEKHM2Q8IWE5 1019 aa12.71□□□□□ -0.37
SEC24D-201ENST00000280551 ZCRB1Q8TBF4 217 aaKnown RBP12.71□□□□□ -0.37
SEC24D-201ENST00000280551 SPEF2Q9C093 1822 aa12.71□□□□□ -0.37
SEC24D-201ENST00000280551 PRDM11Q9NQV5 511 aa12.71□□□□□ -0.37
SEC24D-201ENST00000280551 THRAP3Q9Y2W1 955 aaKnown RBP12.71□□□□□ -0.37
SEC24D-201ENST00000280551 NOP58Q9Y2X3 529 aaKnown RBP12.71□□□□□ -0.37
SEC24D-201ENST00000280551 TAF1LQ8IZX4 1826 aa12.71□□□□□ -0.38
SEC24D-201ENST00000280551 STAP2Q9UGK3 403 aa12.71□□□□□ -0.38
SEC24D-201ENST00000280551 DNAAF4Q8WXU2 420 aa12.7□□□□□ -0.38
SEC24D-201ENST00000280551 SCN7AQ01118 1682 aa12.7□□□□□ -0.38
SEC24D-201ENST00000280551 F6X3S4 739 aa12.7□□□□□ -0.38
SEC24D-201ENST00000280551 RBM25P49756 843 aaKnown RBP12.7□□□□□ -0.38
SEC24D-201ENST00000280551 LMOD2Q6P5Q4 547 aa12.7□□□□□ -0.38
SEC24D-201ENST00000280551 C1orf115Q9H7X2 142 aa12.69□□□□□ -0.38
SEC24D-201ENST00000280551 COL24A1Q17RW2 1714 aa12.69□□□□□ -0.38
SEC24D-201ENST00000280551 DDX60Q8IY21 1712 aaKnown RBP12.69□□□□□ -0.38
SEC24D-201ENST00000280551 LARP1Q6PKG0 1096 aaKnown RBP12.69□□□□□ -0.38
SEC24D-201ENST00000280551 RGS3P49796 1198 aa12.69□□□□□ -0.38
SEC24D-201ENST00000280551 PROSER3Q2NL68 480 aa12.69□□□□□ -0.38
SEC24D-201ENST00000280551 SNRPA1P09661 255 aaKnown RBP12.68□□□□□ -0.38
SEC24D-201ENST00000280551 NFATC2IPQ8NCF5 419 aa12.68□□□□□ -0.38
SEC24D-201ENST00000280551 FKBP5Q13451 457 aaPredicted RBP12.68□□□□□ -0.38
SEC24D-201ENST00000280551 ANP32AP39687 249 aaKnown RBP12.68□□□□□ -0.38
SEC24D-201ENST00000280551 ZNF496Q96IT1 587 aaPredicted RBP12.68□□□□□ -0.38
SEC24D-201ENST00000280551 PRAMEF22A3QJZ6 481 aa12.67□□□□□ -0.38
SEC24D-201ENST00000280551 GSPT1P15170 499 aaKnown RBP12.67□□□□□ -0.38
SEC24D-201ENST00000280551 DDRGK1Q96HY6 314 aa12.67□□□□□ -0.38
SEC24D-201ENST00000280551 FMNL2Q96PY5 1086 aa12.67□□□□□ -0.38
SEC24D-201ENST00000280551 GOLGB1Q14789 3259 aaKnown RBP12.67□□□□□ -0.38
SEC24D-201ENST00000280551 HMMRO75330 724 aa12.67□□□□□ -0.38
SEC24D-201ENST00000280551 TTC22Q5TAA0 569 aa12.67□□□□□ -0.38
SEC24D-201ENST00000280551 CDCA7Q9BWT1 371 aaPredicted RBP12.67□□□□□ -0.38
SEC24D-201ENST00000280551 SRCIN1Q9C0H9 1055 aa12.67□□□□□ -0.38
SEC24D-201ENST00000280551 CASP7P55210 303 aa12.67□□□□□ -0.38
SEC24D-201ENST00000280551 LINS1Q8NG48 757 aa12.67□□□□□ -0.38
SEC24D-201ENST00000280551 KAZALD1Q96I82 304 aa12.66□□□□□ -0.38
SEC24D-201ENST00000280551 SPATA31A1Q5TZJ5 1347 aa12.66□□□□□ -0.38
SEC24D-201ENST00000280551 BCL9LQ86UU0 1499 aa12.66□□□□□ -0.38
SEC24D-201ENST00000280551 BARGINQ6ZT62 677 aa12.66□□□□□ -0.38
SEC24D-201ENST00000280551 RAB11FIP3O75154 756 aa12.66□□□□□ -0.38
SEC24D-201ENST00000280551 PNMA6EA0A0J9YXQ4 647 aa12.65□□□□□ -0.38
SEC24D-201ENST00000280551 PI4KAP2A4QPH2 592 aa12.65□□□□□ -0.38
SEC24D-201ENST00000280551 PI4KAP1Q8N8J0 262 aa12.65□□□□□ -0.38
SEC24D-201ENST00000280551 BTAF1O14981 1849 aa12.65□□□□□ -0.38
SEC24D-201ENST00000280551 IGKV5-2P06315 115 aa12.65□□□□□ -0.38
SEC24D-201ENST00000280551 MYH14Q7Z406 1995 aaKnown RBP12.65□□□□□ -0.38
SEC24D-201ENST00000280551 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.39
SEC24D-201ENST00000280551 RABL6Q3YEC7 729 aaPredicted RBP12.65□□□□□ -0.39
SEC24D-201ENST00000280551 METTL22Q9BUU2 404 aaPredicted RBP12.65□□□□□ -0.39
SEC24D-201ENST00000280551 TOM1L2Q6ZVM7 507 aa12.64□□□□□ -0.39
SEC24D-201ENST00000280551 GLIPR1L2Q4G1C9 344 aa12.64□□□□□ -0.39
SEC24D-201ENST00000280551 SPATA31A5Q5VU36 1347 aa12.64□□□□□ -0.39
SEC24D-201ENST00000280551 SPATA31A7Q8IWB4 1347 aa12.64□□□□□ -0.39
SEC24D-201ENST00000280551 PDE4CQ08493 712 aa12.64□□□□□ -0.39
SEC24D-201ENST00000280551 LNPKQ9C0E8 428 aa12.64□□□□□ -0.39
SEC24D-201ENST00000280551 SLC4A3P48751 1232 aa12.63□□□□□ -0.39
SEC24D-201ENST00000280551 ANKRD45Q5TZF3 282 aa12.63□□□□□ -0.39
SEC24D-201ENST00000280551 CSB-PGBD3P0DP91 1061 aa12.63□□□□□ -0.39
SEC24D-201ENST00000280551 LRRFIP2Q9Y608 721 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms