RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 ZNF775Q96BV0 537 aaPredicted RBP14.66□□□□□ -0.06
LRTM1-201ENST00000273286 KDM4CQ9H3R0 1056 aa14.66□□□□□ -0.06
LRTM1-201ENST00000273286 JCADQ9P266 1359 aa14.66□□□□□ -0.06
LRTM1-201ENST00000273286 C14orf37Q86TY3 774 aa14.66□□□□□ -0.06
LRTM1-201ENST00000273286 C19orf44Q9H6X5 657 aa14.66□□□□□ -0.06
LRTM1-201ENST00000273286 PHLPP1O60346 1717 aa14.65□□□□□ -0.06
LRTM1-201ENST00000273286 GMPR2Q9P2T1 348 aaKnown RBP14.65□□□□□ -0.06
LRTM1-201ENST00000273286 RGS17Q9UGC6 210 aaPredicted RBP14.65□□□□□ -0.06
LRTM1-201ENST00000273286 RTL5Q5HYW3 569 aaPredicted RBP14.64□□□□□ -0.07
LRTM1-201ENST00000273286 DCCP43146 1447 aa14.63□□□□□ -0.07
LRTM1-201ENST00000273286 ATF3P18847 181 aa14.63□□□□□ -0.07
LRTM1-201ENST00000273286 ITGAEP38570 1179 aa14.63□□□□□ -0.07
LRTM1-201ENST00000273286 HELBQ8NG08 1087 aaPredicted RBP14.63□□□□□ -0.07
LRTM1-201ENST00000273286 TLL2Q9Y6L7 1015 aa14.63□□□□□ -0.07
LRTM1-201ENST00000273286 WASF2Q9Y6W5 498 aa14.63□□□□□ -0.07
LRTM1-201ENST00000273286 SPHKAPQ2M3C7 1700 aa14.62□□□□□ -0.07
LRTM1-201ENST00000273286 SPATA31A6Q5VVP1 1343 aa14.61□□□□□ -0.07
LRTM1-201ENST00000273286 SETBP1Q9Y6X0 1596 aa14.61□□□□□ -0.07
LRTM1-201ENST00000273286 VARSP26640 1264 aaKnown RBP14.6□□□□□ -0.07
LRTM1-201ENST00000273286 FAM117AQ9C073 453 aa14.6□□□□□ -0.07
LRTM1-201ENST00000273286 ATP13A2Q9NQ11 1180 aa14.6□□□□□ -0.07
LRTM1-201ENST00000273286 AMOTL2Q9Y2J4 779 aa14.6□□□□□ -0.07
LRTM1-201ENST00000273286 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.6□□□□□ -0.07
LRTM1-201ENST00000273286 COL16A1Q07092 1604 aaPredicted RBP14.6□□□□□ -0.07
LRTM1-201ENST00000273286 AHDC1Q5TGY3 1603 aaPredicted RBP14.6□□□□□ -0.07
LRTM1-201ENST00000273286 C11orf95C9JLR9 678 aaPredicted RBP14.58□□□□□ -0.07
LRTM1-201ENST00000273286 DDRGK1Q96HY6 314 aa14.58□□□□□ -0.07
LRTM1-201ENST00000273286 RRBP1Q9P2E9 1410 aaKnown RBP14.58□□□□□ -0.08
LRTM1-201ENST00000273286 ZNF326Q5BKZ1 582 aaKnown RBP14.58□□□□□ -0.08
LRTM1-201ENST00000273286 FOXJ1Q92949 421 aa14.58□□□□□ -0.08
LRTM1-201ENST00000273286 XRN1Q8IZH2 1706 aaKnown RBP14.57□□□□□ -0.08
LRTM1-201ENST00000273286 POTEAQ6S8J7 498 aa14.57□□□□□ -0.08
LRTM1-201ENST00000273286 SH3D19Q5HYK7 790 aa14.56□□□□□ -0.08
LRTM1-201ENST00000273286 PTPRUQ92729 1446 aa14.55□□□□□ -0.08
LRTM1-201ENST00000273286 NRXN3Q9Y4C0 1643 aa14.55□□□□□ -0.08
LRTM1-201ENST00000273286 SKIV2LQ15477 1246 aaKnown RBP14.55□□□□□ -0.08
LRTM1-201ENST00000273286 ZNF772Q68DY9 489 aaPredicted RBP14.55□□□□□ -0.08
LRTM1-201ENST00000273286 FAM174AQ8TBP5 190 aa14.55□□□□□ -0.08
LRTM1-201ENST00000273286 SHPRHQ149N8 1683 aa14.55□□□□□ -0.08
LRTM1-201ENST00000273286 PLEKHG3A1L390 1219 aa14.54□□□□□ -0.08
LRTM1-201ENST00000273286 NAIPQ13075 1403 aa14.54□□□□□ -0.08
LRTM1-201ENST00000273286 AGERQ15109 404 aa14.53□□□□□ -0.08
LRTM1-201ENST00000273286 MEX3CQ5U5Q3 659 aaKnown RBP14.53□□□□□ -0.08
LRTM1-201ENST00000273286 BRINP3Q76B58 766 aa14.53□□□□□ -0.08
LRTM1-201ENST00000273286 NEXMIFQ5QGS0 1516 aa14.53□□□□□ -0.08
LRTM1-201ENST00000273286 KIF1BO60333 1816 aa14.53□□□□□ -0.08
LRTM1-201ENST00000273286 CLTCL1P53675 1640 aa14.52□□□□□ -0.08
LRTM1-201ENST00000273286 HFM1A2PYH4 1435 aa14.51□□□□□ -0.09
LRTM1-201ENST00000273286 ADGRL3Q9HAR2 1447 aa14.51□□□□□ -0.09
LRTM1-201ENST00000273286 MPNDQ8N594 471 aa14.51□□□□□ -0.09
LRTM1-201ENST00000273286 PROCA1Q8NCQ7 364 aaPredicted RBP14.51□□□□□ -0.09
LRTM1-201ENST00000273286 ASXL1Q8IXJ9 1541 aa14.51□□□□□ -0.09
LRTM1-201ENST00000273286 METP08581 1390 aa14.51□□□□□ -0.09
LRTM1-201ENST00000273286 RPGRIP1LQ68CZ1 1315 aa14.51□□□□□ -0.09
LRTM1-201ENST00000273286 MST1RQ04912 1400 aa14.51□□□□□ -0.09
LRTM1-201ENST00000273286 SETD5Q9C0A6 1442 aa14.51□□□□□ -0.09
LRTM1-201ENST00000273286 CAPN5O15484 640 aaPredicted RBP14.5□□□□□ -0.09
LRTM1-201ENST00000273286 PPARGC1BQ86YN6 1023 aaKnown RBP14.5□□□□□ -0.09
LRTM1-201ENST00000273286 ARMC2Q8NEN0 867 aa14.5□□□□□ -0.09
LRTM1-201ENST00000273286 SENP2Q9HC62 589 aa14.5□□□□□ -0.09
LRTM1-201ENST00000273286 CTDSPL2Q05D32 466 aa14.49□□□□□ -0.09
LRTM1-201ENST00000273286 NNTQ13423 1086 aa14.49□□□□□ -0.09
LRTM1-201ENST00000273286 LRRC59Q96AG4 307 aaKnown RBP14.49□□□□□ -0.09
LRTM1-201ENST00000273286 PTCH1Q13635 1447 aa14.49□□□□□ -0.09
LRTM1-201ENST00000273286 LRP6O75581 1613 aa14.49□□□□□ -0.09
LRTM1-201ENST00000273286 C4orf48Q5BLP8 95 aa14.49□□□□□ -0.09
LRTM1-201ENST00000273286 NBPF14Q5TI25 921 aa14.49□□□□□ -0.09
LRTM1-201ENST00000273286 BPHLQ86WA6 291 aaPredicted RBP14.49□□□□□ -0.09
LRTM1-201ENST00000273286 TRIM47Q96LD4 638 aa14.49□□□□□ -0.09
LRTM1-201ENST00000273286 PRAG1Q86YV5 1406 aa14.48□□□□□ -0.09
LRTM1-201ENST00000273286 BMP1P13497 986 aa14.48□□□□□ -0.09
LRTM1-201ENST00000273286 ARID5BQ14865 1188 aa14.48□□□□□ -0.09
LRTM1-201ENST00000273286 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.48□□□□□ -0.09
LRTM1-201ENST00000273286 NHSL1Q5SYE7 1610 aa14.48□□□□□ -0.09
LRTM1-201ENST00000273286 SNRPBP14678 240 aaKnown RBP14.47□□□□□ -0.09
LRTM1-201ENST00000273286 TRIM52Q96A61 297 aa14.47□□□□□ -0.09
LRTM1-201ENST00000273286 ADH1CP00326 375 aa14.46□□□□□ -0.09
LRTM1-201ENST00000273286 NALCNQ8IZF0 1738 aa14.44□□□□□ -0.1
LRTM1-201ENST00000273286 LRRN4Q8WUT4 740 aa14.44□□□□□ -0.1
LRTM1-201ENST00000273286 KIFC2Q96AC6 838 aa14.44□□□□□ -0.1
LRTM1-201ENST00000273286 CDK15Q96Q40 435 aa14.44□□□□□ -0.1
LRTM1-201ENST00000273286 CDK12Q9NYV4 1490 aaPredicted RBP14.44□□□□□ -0.1
LRTM1-201ENST00000273286 ACIN1Q9UKV3 1341 aaKnown RBP14.44□□□□□ -0.1
LRTM1-201ENST00000273286 RXRBP28702 533 aa14.43□□□□□ -0.1
LRTM1-201ENST00000273286 PPP2R2DQ66LE6 453 aa14.43□□□□□ -0.1
LRTM1-201ENST00000273286 TRIM46Q7Z4K8 759 aa14.43□□□□□ -0.1
LRTM1-201ENST00000273286 LAMC1P11047 1609 aa14.42□□□□□ -0.1
LRTM1-201ENST00000273286 SETD1AO15047 1707 aaKnown RBP14.42□□□□□ -0.1
LRTM1-201ENST00000273286 C1orf167Q5SNV9 1468 aa14.42□□□□□ -0.1
LRTM1-201ENST00000273286 SH3BP5LQ7L8J4 393 aa14.41□□□□□ -0.1
LRTM1-201ENST00000273286 SH3RF1Q7Z6J0 888 aa14.41□□□□□ -0.1
LRTM1-201ENST00000273286 PNPLA6Q8IY17 1366 aa14.41□□□□□ -0.1
LRTM1-201ENST00000273286 MAGEB6P1A0A0J9YX57 407 aa14.41□□□□□ -0.1
LRTM1-201ENST00000273286 WDR4P57081 412 aaKnown RBP14.41□□□□□ -0.1
LRTM1-201ENST00000273286 NEUROD2Q15784 382 aa14.41□□□□□ -0.1
LRTM1-201ENST00000273286 C1QTNF2Q9BXJ5 285 aa14.41□□□□□ -0.1
LRTM1-201ENST00000273286 PPLO60437 1756 aa14.4□□□□□ -0.1
LRTM1-201ENST00000273286 AP1G2O75843 785 aa14.4□□□□□ -0.1
LRTM1-201ENST00000273286 TIMP2P16035 220 aa14.4□□□□□ -0.1
LRTM1-201ENST00000273286 TREML4Q6UXN2 200 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms