RNA–Protein interactions for RNA: ENST00000272133.3

CNIH3-201, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNIH3, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-201ENST00000272133 ARHGEF10O15013 1369 aa22.54■■□□□ 1.2
CNIH3-201ENST00000272133 ADCY5O95622 1261 aa22.54■■□□□ 1.2
CNIH3-201ENST00000272133 TMEM87AQ8NBN3 555 aa22.54■■□□□ 1.2
CNIH3-201ENST00000272133 ADAMTS13Q76LX8 1427 aa22.54■■□□□ 1.2
CNIH3-201ENST00000272133 UVSSAQ2YD98 709 aa22.53■■□□□ 1.2
CNIH3-201ENST00000272133 PIBF1Q8WXW3 757 aa22.53■■□□□ 1.2
CNIH3-201ENST00000272133 HDGFP51858 240 aaKnown RBP22.53■■□□□ 1.2
CNIH3-201ENST00000272133 MYRIPQ8NFW9 859 aa22.53■■□□□ 1.2
CNIH3-201ENST00000272133 TSC1Q92574 1164 aa22.53■■□□□ 1.2
CNIH3-201ENST00000272133 XRN1Q8IZH2 1706 aaKnown RBP22.53■■□□□ 1.2
CNIH3-201ENST00000272133 PLEKHG5O94827 1062 aa22.52■■□□□ 1.2
CNIH3-201ENST00000272133 NOLC1Q14978 699 aaKnown RBP eCLIP22.52■■□□□ 1.2
CNIH3-201ENST00000272133 TECPR2O15040 1411 aa22.51■■□□□ 1.19
CNIH3-201ENST00000272133 ZSCAN22P10073 491 aaPredicted RBP22.51■■□□□ 1.19
CNIH3-201ENST00000272133 PRDM4Q9UKN5 801 aa22.51■■□□□ 1.19
CNIH3-201ENST00000272133 CCDC30Q5VVM6 783 aa22.5■■□□□ 1.19
CNIH3-201ENST00000272133 USP44Q9H0E7 712 aa22.5■■□□□ 1.19
CNIH3-201ENST00000272133 SNX14Q9Y5W7 946 aa22.5■■□□□ 1.19
CNIH3-201ENST00000272133 SOS1Q07889 1333 aaPredicted RBP22.5■■□□□ 1.19
CNIH3-201ENST00000272133 RAD50Q92878 1312 aa22.5■■□□□ 1.19
CNIH3-201ENST00000272133 FAM208AQ9UK61 1670 aaKnown RBP22.5■■□□□ 1.19
CNIH3-201ENST00000272133 FER1L4A9Z1Z3 1794 aa22.5■■□□□ 1.19
CNIH3-201ENST00000272133 AK2P54819 239 aa22.5■■□□□ 1.19
CNIH3-201ENST00000272133 AOX1Q06278 1338 aa22.5■■□□□ 1.19
CNIH3-201ENST00000272133 ROBO2Q9HCK4 1378 aa22.5■■□□□ 1.19
CNIH3-201ENST00000272133 FIBPO43427 364 aa22.49■■□□□ 1.19
CNIH3-201ENST00000272133 DTNBO60941 627 aa22.49■■□□□ 1.19
CNIH3-201ENST00000272133 SYT1P21579 422 aa22.49■■□□□ 1.19
CNIH3-201ENST00000272133 RASEFQ8IZ41 740 aa22.49■■□□□ 1.19
CNIH3-201ENST00000272133 TTC14Q96N46 770 aa22.49■■□□□ 1.19
CNIH3-201ENST00000272133 NALCNQ8IZF0 1738 aa22.49■■□□□ 1.19
CNIH3-201ENST00000272133 USP6P35125 1406 aa22.49■■□□□ 1.19
CNIH3-201ENST00000272133 STX6O43752 255 aa22.49■■□□□ 1.19
CNIH3-201ENST00000272133 UBTFL1P0CB47 393 aaPredicted RBP22.48■■□□□ 1.19
CNIH3-201ENST00000272133 UBE2HP62256 183 aa22.48■■□□□ 1.19
CNIH3-201ENST00000272133 SIRT1Q96EB6 747 aa22.48■■□□□ 1.19
CNIH3-201ENST00000272133 SGSM2O43147 1006 aa22.48■■□□□ 1.19
CNIH3-201ENST00000272133 RUFY3Q7L099 469 aa22.48■■□□□ 1.19
CNIH3-201ENST00000272133 PI4K2BQ8TCG2 481 aa22.48■■□□□ 1.19
CNIH3-201ENST00000272133 USP31Q70CQ4 1352 aa22.48■■□□□ 1.19
CNIH3-201ENST00000272133 CEP170BQ9Y4F5 1589 aaPredicted RBP22.47■■□□□ 1.19
CNIH3-201ENST00000272133 EPB41L2O43491 1005 aaKnown RBP22.47■■□□□ 1.19
CNIH3-201ENST00000272133 PLCB2Q00722 1185 aa22.47■■□□□ 1.19
CNIH3-201ENST00000272133 CPA1P15085 419 aa22.46■■□□□ 1.19
CNIH3-201ENST00000272133 PRIMPOLQ96LW4 560 aa22.46■■□□□ 1.19
CNIH3-201ENST00000272133 EYA1Q99502 592 aa22.46■■□□□ 1.19
CNIH3-201ENST00000272133 KDRP35968 1356 aa22.46■■□□□ 1.19
CNIH3-201ENST00000272133 SURF6O75683 361 aaKnown RBP22.46■■□□□ 1.19
CNIH3-201ENST00000272133 F13A1P00488 732 aa22.46■■□□□ 1.19
CNIH3-201ENST00000272133 GIMAP6Q6P9H5 292 aa22.46■■□□□ 1.19
CNIH3-201ENST00000272133 SSH3Q8TE77 659 aa22.46■■□□□ 1.19
CNIH3-201ENST00000272133 LSG1Q9H089 658 aaKnown RBP22.46■■□□□ 1.19
CNIH3-201ENST00000272133 PLEKHG1Q9ULL1 1385 aa22.46■■□□□ 1.19
CNIH3-201ENST00000272133 ZNF710Q8N1W2 664 aa22.45■■□□□ 1.19
CNIH3-201ENST00000272133 LIMCH1Q9UPQ0 1083 aa22.45■■□□□ 1.19
CNIH3-201ENST00000272133 KDM4AO75164 1064 aa22.45■■□□□ 1.18
CNIH3-201ENST00000272133 LETM1O95202 739 aaPredicted RBP22.45■■□□□ 1.18
CNIH3-201ENST00000272133 LARGE1O95461 756 aa22.45■■□□□ 1.18
CNIH3-201ENST00000272133 PPP1R42Q7Z4L9 355 aa22.45■■□□□ 1.18
CNIH3-201ENST00000272133 SLC26A8Q96RN1 970 aa22.45■■□□□ 1.18
CNIH3-201ENST00000272133 PRDM10Q9NQV6 1147 aa22.45■■□□□ 1.18
CNIH3-201ENST00000272133 CCDC94Q9BW85 323 aaPredicted RBP22.45■■□□□ 1.18
CNIH3-201ENST00000272133 SPG7Q9UQ90 795 aa22.45■■□□□ 1.18
CNIH3-201ENST00000272133 SMC3Q9UQE7 1217 aa22.45■■□□□ 1.18
CNIH3-201ENST00000272133 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.44■■□□□ 1.18
CNIH3-201ENST00000272133 FAM177BA6PVY3 158 aa22.44■■□□□ 1.18
CNIH3-201ENST00000272133 RHPN1Q8TCX5 695 aa22.44■■□□□ 1.18
CNIH3-201ENST00000272133 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.44■■□□□ 1.18
CNIH3-201ENST00000272133 FMN2Q9NZ56 1722 aa22.44■■□□□ 1.18
CNIH3-201ENST00000272133 PLEKHG3A1L390 1219 aa22.44■■□□□ 1.18
CNIH3-201ENST00000272133 CWC27Q6UX04 472 aaKnown RBP22.44■■□□□ 1.18
CNIH3-201ENST00000272133 FUCA2Q9BTY2 467 aa22.44■■□□□ 1.18
CNIH3-201ENST00000272133 AP5Z1O43299 807 aa22.43■■□□□ 1.18
CNIH3-201ENST00000272133 HMGN5P82970 282 aaKnown RBP22.43■■□□□ 1.18
CNIH3-201ENST00000272133 SMAP1Q8IYB5 467 aaPredicted RBP22.43■■□□□ 1.18
CNIH3-201ENST00000272133 FLT4P35916 1363 aa22.43■■□□□ 1.18
CNIH3-201ENST00000272133 PTPRUQ92729 1446 aa22.43■■□□□ 1.18
CNIH3-201ENST00000272133 TOPAZ1Q8N9V7 1692 aa22.43■■□□□ 1.18
CNIH3-201ENST00000272133 PHAXQ9H814 394 aaKnown RBP22.43■■□□□ 1.18
CNIH3-201ENST00000272133 SPTLC3Q9NUV7 552 aa22.43■■□□□ 1.18
CNIH3-201ENST00000272133 IGSF1Q8N6C5 1336 aa22.42■■□□□ 1.18
CNIH3-201ENST00000272133 CASTP20810 708 aaKnown RBP22.42■■□□□ 1.18
CNIH3-201ENST00000272133 GTF2F1P35269 517 aaKnown RBP eCLIP22.42■■□□□ 1.18
CNIH3-201ENST00000272133 DNM1Q05193 864 aaKnown RBP22.42■■□□□ 1.18
CNIH3-201ENST00000272133 SBNO1A3KN83 1393 aa22.41■■□□□ 1.18
CNIH3-201ENST00000272133 CCDC83Q8IWF9 413 aa22.41■■□□□ 1.18
CNIH3-201ENST00000272133 CNTROBQ8N137 903 aa22.41■■□□□ 1.18
CNIH3-201ENST00000272133 ARHGAP23Q9P227 1491 aa22.41■■□□□ 1.18
CNIH3-201ENST00000272133 RAB11FIP3O75154 756 aa22.41■■□□□ 1.18
CNIH3-201ENST00000272133 LRRC37A3O60309 1634 aa22.4■■□□□ 1.18
CNIH3-201ENST00000272133 GNAT3A8MTJ3 354 aa22.4■■□□□ 1.18
CNIH3-201ENST00000272133 SRGAP3O43295 1099 aa22.4■■□□□ 1.18
CNIH3-201ENST00000272133 AMPHP49418 695 aa22.4■■□□□ 1.18
CNIH3-201ENST00000272133 POLA2Q14181 598 aa22.4■■□□□ 1.18
CNIH3-201ENST00000272133 ATP6V1DQ9Y5K8 247 aa22.4■■□□□ 1.18
CNIH3-201ENST00000272133 SLIT1O75093 1534 aa22.4■■□□□ 1.18
CNIH3-201ENST00000272133 PXDNLA1KZ92 1463 aa22.4■■□□□ 1.18
CNIH3-201ENST00000272133 GJB2P29033 226 aa22.4■■□□□ 1.18
CNIH3-201ENST00000272133 N4BP2Q86UW6 1770 aaPredicted RBP22.39■■□□□ 1.18
CNIH3-201ENST00000272133 KCNF1Q9H3M0 494 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms