RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 MX1P20591 662 aa23.3■■□□□ 1.32
CPNE7-201ENST00000268720 CACNA1FO60840 1977 aa23.3■■□□□ 1.32
CPNE7-201ENST00000268720 PI4KAP2A4QPH2 592 aa23.3■■□□□ 1.32
CPNE7-201ENST00000268720 AKAP4Q5JQC9 854 aa23.3■■□□□ 1.32
CPNE7-201ENST00000268720 PI4KAP1Q8N8J0 262 aa23.3■■□□□ 1.32
CPNE7-201ENST00000268720 MED1Q15648 1581 aaPredicted RBP23.29■■□□□ 1.32
CPNE7-201ENST00000268720 GDPD2Q9HCC8 539 aa23.29■■□□□ 1.32
CPNE7-201ENST00000268720 ZDHHC9Q9Y397 364 aa23.29■■□□□ 1.32
CPNE7-201ENST00000268720 ANKRD24Q8TF21 1146 aa23.29■■□□□ 1.32
CPNE7-201ENST00000268720 TRIM44Q96DX7 344 aaPredicted RBP23.29■■□□□ 1.32
CPNE7-201ENST00000268720 DDX54Q8TDD1 881 aaKnown RBP23.28■■□□□ 1.32
CPNE7-201ENST00000268720 SRCIN1Q9C0H9 1055 aa23.28■■□□□ 1.32
CPNE7-201ENST00000268720 ERC2O15083 957 aa23.28■■□□□ 1.32
CPNE7-201ENST00000268720 PLEKHO1Q53GL0 409 aaPredicted RBP23.28■■□□□ 1.32
CPNE7-201ENST00000268720 PRAMEF22A3QJZ6 481 aa23.27■■□□□ 1.32
CPNE7-201ENST00000268720 PPP1R42Q7Z4L9 355 aa23.27■■□□□ 1.32
CPNE7-201ENST00000268720 ADAMTSL3P82987 1691 aa23.27■■□□□ 1.32
CPNE7-201ENST00000268720 GOLGA6L22H0YM25 854 aa23.26■■□□□ 1.31
CPNE7-201ENST00000268720 REC8O95072 547 aa23.26■■□□□ 1.31
CPNE7-201ENST00000268720 PXDNLA1KZ92 1463 aa23.26■■□□□ 1.31
CPNE7-201ENST00000268720 RNMTO43148 476 aaKnown RBP23.26■■□□□ 1.31
CPNE7-201ENST00000268720 KRT28Q7Z3Y7 464 aa23.26■■□□□ 1.31
CPNE7-201ENST00000268720 PROSER2Q86WR7 435 aaPredicted RBP23.26■■□□□ 1.31
CPNE7-201ENST00000268720 MPNDQ8N594 471 aa23.26■■□□□ 1.31
CPNE7-201ENST00000268720 SSH3Q8TE77 659 aa23.26■■□□□ 1.31
CPNE7-201ENST00000268720 BEND3Q5T5X7 828 aa23.25■■□□□ 1.31
CPNE7-201ENST00000268720 ZC3H6P61129 1189 aaKnown RBP23.25■■□□□ 1.31
CPNE7-201ENST00000268720 DNAAF4Q8WXU2 420 aa23.25■■□□□ 1.31
CPNE7-201ENST00000268720 ISY1Q9ULR0 285 aaKnown RBP23.25■■□□□ 1.31
CPNE7-201ENST00000268720 PROSER3Q2NL68 480 aa23.24■■□□□ 1.31
CPNE7-201ENST00000268720 SURF6O75683 361 aaKnown RBP23.24■■□□□ 1.31
CPNE7-201ENST00000268720 CPA1P15085 419 aa23.24■■□□□ 1.31
CPNE7-201ENST00000268720 C1orf141Q5JVX7 400 aa23.24■■□□□ 1.31
CPNE7-201ENST00000268720 DDX17Q92841 729 aaKnown RBP23.24■■□□□ 1.31
CPNE7-201ENST00000268720 KDM3BQ7LBC6 1761 aa23.23■■□□□ 1.31
CPNE7-201ENST00000268720 ST18O60284 1047 aa23.23■■□□□ 1.31
CPNE7-201ENST00000268720 GPT2Q8TD30 523 aa23.23■■□□□ 1.31
CPNE7-201ENST00000268720 SRGAP3O43295 1099 aa23.23■■□□□ 1.31
CPNE7-201ENST00000268720 AMOTQ4VCS5 1084 aa23.23■■□□□ 1.31
CPNE7-201ENST00000268720 RNF214Q8ND24 703 aa23.23■■□□□ 1.31
CPNE7-201ENST00000268720 PHRF1Q9P1Y6 1649 aaKnown RBP23.22■■□□□ 1.31
CPNE7-201ENST00000268720 HOXB7P09629 217 aa23.22■■□□□ 1.31
CPNE7-201ENST00000268720 NASPP49321 788 aaPredicted RBP23.22■■□□□ 1.31
CPNE7-201ENST00000268720 TMX3Q96JJ7 454 aa23.22■■□□□ 1.31
CPNE7-201ENST00000268720 LMBRD1Q9NUN5 540 aa23.22■■□□□ 1.31
CPNE7-201ENST00000268720 ADCY9O60503 1353 aa23.22■■□□□ 1.31
CPNE7-201ENST00000268720 KLHL40Q2TBA0 621 aa23.22■■□□□ 1.31
CPNE7-201ENST00000268720 ESYT1Q9BSJ8 1104 aa23.22■■□□□ 1.31
CPNE7-201ENST00000268720 STAP2Q9UGK3 403 aa23.21■■□□□ 1.31
CPNE7-201ENST00000268720 N4BP2Q86UW6 1770 aaPredicted RBP23.21■■□□□ 1.31
CPNE7-201ENST00000268720 LMO7Q8WWI1 1683 aa23.21■■□□□ 1.31
CPNE7-201ENST00000268720 SLIT3O75094 1523 aa23.21■■□□□ 1.31
CPNE7-201ENST00000268720 CHMLP26374 656 aa23.21■■□□□ 1.31
CPNE7-201ENST00000268720 GIGYF1O75420 1035 aaPredicted RBP23.2■■□□□ 1.3
CPNE7-201ENST00000268720 POLA2Q14181 598 aa23.2■■□□□ 1.3
CPNE7-201ENST00000268720 PTMSP20962 102 aa23.2■■□□□ 1.3
CPNE7-201ENST00000268720 PRIM1P49642 420 aaKnown RBP23.19■■□□□ 1.3
CPNE7-201ENST00000268720 ZSCAN23Q3MJ62 389 aa23.19■■□□□ 1.3
CPNE7-201ENST00000268720 NCAPD2Q15021 1401 aa23.19■■□□□ 1.3
CPNE7-201ENST00000268720 TUBGCP6Q96RT7 1819 aa23.19■■□□□ 1.3
CPNE7-201ENST00000268720 CLEC17AQ6ZS10 378 aa23.18■■□□□ 1.3
CPNE7-201ENST00000268720 RHPN1Q8TCX5 695 aa23.18■■□□□ 1.3
CPNE7-201ENST00000268720 DBF4Q9UBU7 674 aaPredicted RBP23.18■■□□□ 1.3
CPNE7-201ENST00000268720 C1orf167Q5SNV9 1468 aa23.18■■□□□ 1.3
CPNE7-201ENST00000268720 SYCE3A1L190 88 aa23.18■■□□□ 1.3
CPNE7-201ENST00000268720 RBSNQ9H1K0 784 aa23.18■■□□□ 1.3
CPNE7-201ENST00000268720 NUCB2P80303 420 aa23.17■■□□□ 1.3
CPNE7-201ENST00000268720 MAP3K2Q9Y2U5 619 aa23.17■■□□□ 1.3
CPNE7-201ENST00000268720 ERBB3P21860 1342 aa23.17■■□□□ 1.3
CPNE7-201ENST00000268720 CYP2E1P05181 493 aaPredicted RBP23.17■■□□□ 1.3
CPNE7-201ENST00000268720 SPG7Q9UQ90 795 aa23.17■■□□□ 1.3
CPNE7-201ENST00000268720 CWF19L2Q2TBE0 894 aaKnown RBP23.16■■□□□ 1.3
CPNE7-201ENST00000268720 C19orf44Q9H6X5 657 aa23.16■■□□□ 1.3
CPNE7-201ENST00000268720 TRPM3Q9HCF6 1732 aaPredicted RBP23.16■■□□□ 1.3
CPNE7-201ENST00000268720 TMEM63CQ9P1W3 806 aa23.16■■□□□ 1.3
CPNE7-201ENST00000268720 PA2G4Q9UQ80 394 aaKnown RBP23.16■■□□□ 1.3
CPNE7-201ENST00000268720 RGPD5Q99666 1765 aa23.15■■□□□ 1.3
CPNE7-201ENST00000268720 SLC39A6Q13433 755 aa23.15■■□□□ 1.3
CPNE7-201ENST00000268720 HEG1Q9ULI3 1381 aa23.14■■□□□ 1.3
CPNE7-201ENST00000268720 PI4K2BQ8TCG2 481 aa23.14■■□□□ 1.29
CPNE7-201ENST00000268720 PIP4K2AP48426 406 aaPredicted RBP23.14■■□□□ 1.29
CPNE7-201ENST00000268720 CWC27Q6UX04 472 aaKnown RBP23.14■■□□□ 1.29
CPNE7-201ENST00000268720 CABLES1Q8TDN4 633 aa23.14■■□□□ 1.29
CPNE7-201ENST00000268720 JARID2Q92833 1246 aaPredicted RBP23.14■■□□□ 1.29
CPNE7-201ENST00000268720 RAB11FIP3O75154 756 aa23.13■■□□□ 1.29
CPNE7-201ENST00000268720 AIMP1Q12904 312 aaKnown RBP23.13■■□□□ 1.29
CPNE7-201ENST00000268720 NLRP2Q9NX02 1062 aa23.13■■□□□ 1.29
CPNE7-201ENST00000268720 CCDC173Q0VFZ6 552 aa23.12■■□□□ 1.29
CPNE7-201ENST00000268720 COL9A3Q14050 684 aaPredicted RBP23.12■■□□□ 1.29
CPNE7-201ENST00000268720 KIF1BPQ96EK5 621 aa23.12■■□□□ 1.29
CPNE7-201ENST00000268720 OS9Q13438 667 aaPredicted RBP23.12■■□□□ 1.29
CPNE7-201ENST00000268720 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.12■■□□□ 1.29
CPNE7-201ENST00000268720 GADD45BO75293 160 aaPredicted RBP23.11■■□□□ 1.29
CPNE7-201ENST00000268720 C9orf78Q9NZ63 289 aaPredicted RBP23.11■■□□□ 1.29
CPNE7-201ENST00000268720 KSR2Q6VAB6 950 aa23.11■■□□□ 1.29
CPNE7-201ENST00000268720 UBE2Q2Q8WVN8 375 aa23.11■■□□□ 1.29
CPNE7-201ENST00000268720 CHMP4AQ9BY43 222 aa23.1■■□□□ 1.29
CPNE7-201ENST00000268720 ANP32BQ92688 251 aaKnown RBP23.1■■□□□ 1.29
CPNE7-201ENST00000268720 PPP1R9BQ96SB3 815 aa23.09■■□□□ 1.29
CPNE7-201ENST00000268720 CWC22Q9HCG8 908 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms