RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PCDHB15Q9Y5E8 787 aa18.22■□□□□ 0.51
TIMP3-201ENST00000266085 U3KPZ7 1027 aaPredicted RBP18.22■□□□□ 0.51
TIMP3-201ENST00000266085 KRT24Q2M2I5 525 aa18.21■□□□□ 0.51
TIMP3-201ENST00000266085 ORAI2Q96SN7 254 aa18.21■□□□□ 0.51
TIMP3-201ENST00000266085 TSPYL6Q8N831 410 aa18.21■□□□□ 0.51
TIMP3-201ENST00000266085 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.21■□□□□ 0.51
TIMP3-201ENST00000266085 CCDC39Q9UFE4 941 aa18.21■□□□□ 0.51
TIMP3-201ENST00000266085 PIK3C2GO75747 1445 aa18.21■□□□□ 0.51
TIMP3-201ENST00000266085 NFATC2IPQ8NCF5 419 aa18.21■□□□□ 0.5
TIMP3-201ENST00000266085 ANKIB1Q9P2G1 1089 aa18.21■□□□□ 0.5
TIMP3-201ENST00000266085 MAST1Q9Y2H9 1570 aa18.2■□□□□ 0.5
TIMP3-201ENST00000266085 CFAP65Q6ZU64 1925 aaKnown RBP18.2■□□□□ 0.5
TIMP3-201ENST00000266085 HOXC9P31274 260 aa18.2■□□□□ 0.5
TIMP3-201ENST00000266085 TRPM2O94759 1503 aa18.2■□□□□ 0.5
TIMP3-201ENST00000266085 COL17A1Q9UMD9 1497 aaPredicted RBP18.2■□□□□ 0.5
TIMP3-201ENST00000266085 TSHZ3Q63HK5 1081 aa18.19■□□□□ 0.5
TIMP3-201ENST00000266085 PLEKHH1Q9ULM0 1364 aa18.19■□□□□ 0.5
TIMP3-201ENST00000266085 BMP2KLQ5H9B9 411 aa18.19■□□□□ 0.5
TIMP3-201ENST00000266085 IP6K1Q92551 441 aa18.19■□□□□ 0.5
TIMP3-201ENST00000266085 NEO1Q92859 1461 aa18.19■□□□□ 0.5
TIMP3-201ENST00000266085 VAMP4O75379 141 aa18.19■□□□□ 0.5
TIMP3-201ENST00000266085 CCDC192P0DO97 292 aa18.19■□□□□ 0.5
TIMP3-201ENST00000266085 PIP4K2AP48426 406 aaPredicted RBP18.19■□□□□ 0.5
TIMP3-201ENST00000266085 MRPL50Q8N5N7 158 aaKnown RBP18.19■□□□□ 0.5
TIMP3-201ENST00000266085 ACSBG1Q96GR2 724 aa18.19■□□□□ 0.5
TIMP3-201ENST00000266085 MAP3K12Q12852 859 aa18.19■□□□□ 0.5
TIMP3-201ENST00000266085 SNRKQ9NRH2 765 aa18.19■□□□□ 0.5
TIMP3-201ENST00000266085 CFAP45Q9UL16 551 aa18.19■□□□□ 0.5
TIMP3-201ENST00000266085 MINDY4BA8MYZ0 360 aa18.18■□□□□ 0.5
TIMP3-201ENST00000266085 SLC5A1P13866 664 aa18.18■□□□□ 0.5
TIMP3-201ENST00000266085 IL2RBP14784 551 aa18.18■□□□□ 0.5
TIMP3-201ENST00000266085 DDX11Q96FC9 970 aa18.18■□□□□ 0.5
TIMP3-201ENST00000266085 CDK5RAP3Q96JB5 506 aa18.18■□□□□ 0.5
TIMP3-201ENST00000266085 HSP90AA2PQ14568 343 aaPredicted RBP18.18■□□□□ 0.5
TIMP3-201ENST00000266085 DDB1Q16531 1140 aa18.18■□□□□ 0.5
TIMP3-201ENST00000266085 NAPBQ9H115 298 aa18.18■□□□□ 0.5
TIMP3-201ENST00000266085 TNMDQ9H2S6 317 aa18.18■□□□□ 0.5
TIMP3-201ENST00000266085 OFD1O75665 1012 aa18.17■□□□□ 0.5
TIMP3-201ENST00000266085 PDILTQ8N807 584 aa18.17■□□□□ 0.5
TIMP3-201ENST00000266085 SPATA32Q96LK8 384 aa18.17■□□□□ 0.5
TIMP3-201ENST00000266085 TNNQ9UQP3 1299 aa18.17■□□□□ 0.5
TIMP3-201ENST00000266085 RHPN1Q8TCX5 695 aa18.17■□□□□ 0.5
TIMP3-201ENST00000266085 AK7Q96M32 723 aa18.17■□□□□ 0.5
TIMP3-201ENST00000266085 C8orf37Q96NL8 207 aa18.17■□□□□ 0.5
TIMP3-201ENST00000266085 ANO8Q9HCE9 1232 aaPredicted RBP18.17■□□□□ 0.5
TIMP3-201ENST00000266085 KSR2Q6VAB6 950 aa18.16■□□□□ 0.5
TIMP3-201ENST00000266085 ZFYVE9O95405 1425 aa18.16■□□□□ 0.5
TIMP3-201ENST00000266085 GPS2Q13227 327 aa18.16■□□□□ 0.5
TIMP3-201ENST00000266085 HDAC1Q13547 482 aaPredicted RBP18.16■□□□□ 0.5
TIMP3-201ENST00000266085 MBD5Q9P267 1494 aa18.16■□□□□ 0.5
TIMP3-201ENST00000266085 GOLIM4O00461 696 aa18.16■□□□□ 0.5
TIMP3-201ENST00000266085 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.16■□□□□ 0.5
TIMP3-201ENST00000266085 YEATS2Q9ULM3 1422 aa18.15■□□□□ 0.5
TIMP3-201ENST00000266085 SOGA3Q5TF21 947 aa18.15■□□□□ 0.5
TIMP3-201ENST00000266085 TBC1D9Q6ZT07 1266 aa18.15■□□□□ 0.5
TIMP3-201ENST00000266085 FERMT3Q86UX7 667 aa18.15■□□□□ 0.5
TIMP3-201ENST00000266085 CCDC83Q8IWF9 413 aa18.15■□□□□ 0.5
TIMP3-201ENST00000266085 SMC2O95347 1197 aa18.15■□□□□ 0.5
TIMP3-201ENST00000266085 LTKP29376 864 aa18.15■□□□□ 0.5
TIMP3-201ENST00000266085 RPGRQ92834 1020 aaKnown RBP18.15■□□□□ 0.5
TIMP3-201ENST00000266085 CDC5LQ99459 802 aaKnown RBP18.15■□□□□ 0.5
TIMP3-201ENST00000266085 EPS15P42566 896 aa18.15■□□□□ 0.5
TIMP3-201ENST00000266085 ANKRD44Q8N8A2 993 aa18.15■□□□□ 0.5
TIMP3-201ENST00000266085 EVI5LQ96CN4 794 aa18.15■□□□□ 0.5
TIMP3-201ENST00000266085 GRM8O00222 908 aa18.15■□□□□ 0.5
TIMP3-201ENST00000266085 FILIP1LQ4L180 1135 aa18.15■□□□□ 0.5
TIMP3-201ENST00000266085 NOL7Q9UMY1 257 aaKnown RBP18.15■□□□□ 0.5
TIMP3-201ENST00000266085 DZIP1Q86YF9 867 aaKnown RBP18.14■□□□□ 0.49
TIMP3-201ENST00000266085 PIBF1Q8WXW3 757 aa18.14■□□□□ 0.49
TIMP3-201ENST00000266085 USP5P45974 858 aa18.14■□□□□ 0.49
TIMP3-201ENST00000266085 TMEM2Q9UHN6 1383 aa18.14■□□□□ 0.49
TIMP3-201ENST00000266085 ALDH1L1O75891 902 aa18.14■□□□□ 0.49
TIMP3-201ENST00000266085 RLBP1P12271 317 aa18.14■□□□□ 0.49
TIMP3-201ENST00000266085 LMBR1LQ6UX01 489 aa18.13■□□□□ 0.49
TIMP3-201ENST00000266085 ATP6V1AP38606 617 aa18.13■□□□□ 0.49
TIMP3-201ENST00000266085 MNS1Q8NEH6 495 aa18.13■□□□□ 0.49
TIMP3-201ENST00000266085 DCAF5Q96JK2 942 aa18.13■□□□□ 0.49
TIMP3-201ENST00000266085 MAP3K5Q99683 1374 aa18.13■□□□□ 0.49
TIMP3-201ENST00000266085 C6orf229H3BNL8 230 aa18.13■□□□□ 0.49
TIMP3-201ENST00000266085 RFC4P35249 363 aa18.13■□□□□ 0.49
TIMP3-201ENST00000266085 NAP1L1P55209 391 aaKnown RBP18.13■□□□□ 0.49
TIMP3-201ENST00000266085 LINS1Q8NG48 757 aa18.13■□□□□ 0.49
TIMP3-201ENST00000266085 WASF1Q92558 559 aa18.13■□□□□ 0.49
TIMP3-201ENST00000266085 FAM13BQ9NYF5 915 aa18.13■□□□□ 0.49
TIMP3-201ENST00000266085 TMOD2Q9NZR1 351 aa18.13■□□□□ 0.49
TIMP3-201ENST00000266085 CCDC173Q0VFZ6 552 aa18.12■□□□□ 0.49
TIMP3-201ENST00000266085 CCAR1Q8IX12 1150 aaKnown RBP18.12■□□□□ 0.49
TIMP3-201ENST00000266085 SH2B1Q9NRF2 756 aaPredicted RBP18.12■□□□□ 0.49
TIMP3-201ENST00000266085 NPC1L1Q9UHC9 1359 aa18.12■□□□□ 0.49
TIMP3-201ENST00000266085 POLR3DP05423 398 aaPredicted RBP18.11■□□□□ 0.49
TIMP3-201ENST00000266085 IL13P35225 146 aa18.11■□□□□ 0.49
TIMP3-201ENST00000266085 TTC22Q5TAA0 569 aa18.11■□□□□ 0.49
TIMP3-201ENST00000266085 EDC4Q6P2E9 1401 aaKnown RBP18.11■□□□□ 0.49
TIMP3-201ENST00000266085 NUCB1Q02818 461 aa18.11■□□□□ 0.49
TIMP3-201ENST00000266085 DDX46Q7L014 1031 aaKnown RBP18.11■□□□□ 0.49
TIMP3-201ENST00000266085 ZNF213O14771 459 aa18.11■□□□□ 0.49
TIMP3-201ENST00000266085 HMGB1P09429 215 aaKnown RBP18.11■□□□□ 0.49
TIMP3-201ENST00000266085 MKNK2Q9HBH9 465 aa18.11■□□□□ 0.49
TIMP3-201ENST00000266085 ZNF219Q9P2Y4 722 aaPredicted RBP18.11■□□□□ 0.49
TIMP3-201ENST00000266085 KRT18P05783 430 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms