RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 PIGBQ92521 554 aa15.76■□□□□ 0.11
PRPF6-201ENST00000266079 PKD1L3Q7Z443 1732 aa15.76■□□□□ 0.11
PRPF6-201ENST00000266079 SLC4A2P04920 1241 aa15.75■□□□□ 0.11
PRPF6-201ENST00000266079 HDGFL1Q5TGJ6 251 aa15.75■□□□□ 0.11
PRPF6-201ENST00000266079 PTF1AQ7RTS3 328 aa15.75■□□□□ 0.11
PRPF6-201ENST00000266079 ARXQ96QS3 562 aa15.75■□□□□ 0.11
PRPF6-201ENST00000266079 TNS2Q63HR2 1409 aa15.75■□□□□ 0.11
PRPF6-201ENST00000266079 NKX1-1Q15270 411 aaPredicted RBP15.75■□□□□ 0.11
PRPF6-201ENST00000266079 PANK2Q9BZ23 570 aa15.75■□□□□ 0.11
PRPF6-201ENST00000266079 RBM42Q9BTD8 480 aaKnown RBP15.74■□□□□ 0.11
PRPF6-201ENST00000266079 ERVV-2B6SEH9 535 aa15.73■□□□□ 0.11
PRPF6-201ENST00000266079 RLBP1P12271 317 aa15.73■□□□□ 0.11
PRPF6-201ENST00000266079 MCM4P33991 863 aa15.73■□□□□ 0.11
PRPF6-201ENST00000266079 TBC1D2Q9BYX2 928 aa15.73■□□□□ 0.11
PRPF6-201ENST00000266079 COG6Q9Y2V7 657 aa15.73■□□□□ 0.11
PRPF6-201ENST00000266079 G2E3Q7L622 706 aa15.73■□□□□ 0.11
PRPF6-201ENST00000266079 LRRC37A3O60309 1634 aa15.73■□□□□ 0.11
PRPF6-201ENST00000266079 UPF2Q9HAU5 1272 aaKnown RBP15.73■□□□□ 0.11
PRPF6-201ENST00000266079 SHANK3Q9BYB0 1731 aa15.72■□□□□ 0.11
PRPF6-201ENST00000266079 ZNF428Q96B54 188 aa15.72■□□□□ 0.11
PRPF6-201ENST00000266079 TBC1D32Q96NH3 1257 aa15.72■□□□□ 0.11
PRPF6-201ENST00000266079 GIGYF1O75420 1035 aaPredicted RBP15.72■□□□□ 0.11
PRPF6-201ENST00000266079 CT47B1P0C2W7 299 aaPredicted RBP15.72■□□□□ 0.11
PRPF6-201ENST00000266079 MRPL50Q8N5N7 158 aaKnown RBP15.72■□□□□ 0.11
PRPF6-201ENST00000266079 USP16Q9Y5T5 823 aa15.72■□□□□ 0.11
PRPF6-201ENST00000266079 PDE3AQ14432 1141 aa15.71■□□□□ 0.11
PRPF6-201ENST00000266079 FTSJ3Q8IY81 847 aaKnown RBP15.71■□□□□ 0.11
PRPF6-201ENST00000266079 STK31Q9BXU1 1019 aa15.71■□□□□ 0.11
PRPF6-201ENST00000266079 CHPF2Q9P2E5 772 aa15.71■□□□□ 0.11
PRPF6-201ENST00000266079 GLI3P10071 1580 aa15.71■□□□□ 0.11
PRPF6-201ENST00000266079 SCN11AQ9UI33 1791 aa15.71■□□□□ 0.11
PRPF6-201ENST00000266079 TRIM27P14373 513 aa15.71■□□□□ 0.11
PRPF6-201ENST00000266079 ATRNO75882 1429 aa15.71■□□□□ 0.11
PRPF6-201ENST00000266079 MYL6BP14649 208 aa15.7■□□□□ 0.1
PRPF6-201ENST00000266079 MRE11P49959 708 aa15.7■□□□□ 0.1
PRPF6-201ENST00000266079 KCNQ4P56696 695 aa15.7■□□□□ 0.1
PRPF6-201ENST00000266079 ZKSCAN2Q63HK3 967 aa15.7■□□□□ 0.1
PRPF6-201ENST00000266079 ZNF330Q9Y3S2 320 aaPredicted RBP15.7■□□□□ 0.1
PRPF6-201ENST00000266079 PROSER3Q2NL68 480 aa15.7■□□□□ 0.1
PRPF6-201ENST00000266079 PHAXQ9H814 394 aaKnown RBP15.7■□□□□ 0.1
PRPF6-201ENST00000266079 ZNF772Q68DY9 489 aaPredicted RBP15.7■□□□□ 0.1
PRPF6-201ENST00000266079 FMNL2Q96PY5 1086 aa15.7■□□□□ 0.1
PRPF6-201ENST00000266079 GZF1Q9H116 711 aaPredicted RBP15.7■□□□□ 0.1
PRPF6-201ENST00000266079 BABAM1Q9NWV8 329 aa15.7■□□□□ 0.1
PRPF6-201ENST00000266079 F6X3S4 739 aa15.69■□□□□ 0.1
PRPF6-201ENST00000266079 ALDH1L2Q3SY69 923 aa15.69■□□□□ 0.1
PRPF6-201ENST00000266079 CCDC30Q5VVM6 783 aa15.69■□□□□ 0.1
PRPF6-201ENST00000266079 ATG3Q9NT62 314 aa15.69■□□□□ 0.1
PRPF6-201ENST00000266079 AIMP1Q12904 312 aaKnown RBP15.69■□□□□ 0.1
PRPF6-201ENST00000266079 RGS17Q9UGC6 210 aaPredicted RBP15.69■□□□□ 0.1
PRPF6-201ENST00000266079 ATF7IPQ6VMQ6 1270 aa15.68■□□□□ 0.1
PRPF6-201ENST00000266079 POTEAQ6S8J7 498 aa15.68■□□□□ 0.1
PRPF6-201ENST00000266079 SLC4A10Q6U841 1118 aa15.68■□□□□ 0.1
PRPF6-201ENST00000266079 TRAK2O60296 914 aa15.68■□□□□ 0.1
PRPF6-201ENST00000266079 FKBP5Q13451 457 aaPredicted RBP15.67■□□□□ 0.1
PRPF6-201ENST00000266079 ITPRIPQ8IWB1 547 aa15.67■□□□□ 0.1
PRPF6-201ENST00000266079 TOGARAM1Q9Y4F4 1720 aa15.67■□□□□ 0.1
PRPF6-201ENST00000266079 KIF16BQ96L93 1317 aa15.67■□□□□ 0.1
PRPF6-201ENST00000266079 SNRPA1P09661 255 aaKnown RBP15.67■□□□□ 0.1
PRPF6-201ENST00000266079 DZIP1LQ8IYY4 767 aaKnown RBP15.67■□□□□ 0.1
PRPF6-201ENST00000266079 PLEKHG2Q9H7P9 1386 aa15.66■□□□□ 0.1
PRPF6-201ENST00000266079 RBM6P78332 1123 aaKnown RBP15.66■□□□□ 0.1
PRPF6-201ENST00000266079 ESPNB1AK53 854 aa15.66■□□□□ 0.1
PRPF6-201ENST00000266079 CHMP5Q9NZZ3 219 aa15.66■□□□□ 0.1
PRPF6-201ENST00000266079 A1BGP04217 495 aa15.65■□□□□ 0.1
PRPF6-201ENST00000266079 RXRBP28702 533 aa15.65■□□□□ 0.1
PRPF6-201ENST00000266079 ILDR1Q86SU0 546 aaPredicted RBP15.65■□□□□ 0.1
PRPF6-201ENST00000266079 DNAJC10Q8IXB1 793 aa15.65■□□□□ 0.1
PRPF6-201ENST00000266079 TMEM57Q8N5G2 664 aa15.65■□□□□ 0.1
PRPF6-201ENST00000266079 WNK3Q9BYP7 1800 aa15.65■□□□□ 0.1
PRPF6-201ENST00000266079 IPO8O15397 1037 aaKnown RBP15.65■□□□□ 0.1
PRPF6-201ENST00000266079 FLIIQ13045 1269 aa15.65■□□□□ 0.1
PRPF6-201ENST00000266079 BCL9O00512 1426 aa15.65■□□□□ 0.1
PRPF6-201ENST00000266079 ADAMTS7Q9UKP4 1686 aa15.64■□□□□ 0.09
PRPF6-201ENST00000266079 KRT27Q7Z3Y8 459 aa15.64■□□□□ 0.09
PRPF6-201ENST00000266079 SLC4A9Q96Q91 983 aa15.64■□□□□ 0.09
PRPF6-201ENST00000266079 GRPEL1Q9HAV7 217 aa15.64■□□□□ 0.09
PRPF6-201ENST00000266079 ISY1Q9ULR0 285 aaKnown RBP15.64■□□□□ 0.09
PRPF6-201ENST00000266079 MRC1P22897 1456 aa15.64■□□□□ 0.09
PRPF6-201ENST00000266079 KDM3BQ7LBC6 1761 aa15.64■□□□□ 0.09
PRPF6-201ENST00000266079 SPRYD3Q8NCJ5 442 aa15.64■□□□□ 0.09
PRPF6-201ENST00000266079 ONECUT3O60422 494 aaPredicted RBP15.63■□□□□ 0.09
PRPF6-201ENST00000266079 SIPA1L3O60292 1781 aaPredicted RBP15.63■□□□□ 0.09
PRPF6-201ENST00000266079 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.63■□□□□ 0.09
PRPF6-201ENST00000266079 HEG1Q9ULI3 1381 aa15.63■□□□□ 0.09
PRPF6-201ENST00000266079 DOT1LQ8TEK3 1739 aa15.63■□□□□ 0.09
PRPF6-201ENST00000266079 DBF4Q9UBU7 674 aaPredicted RBP15.62■□□□□ 0.09
PRPF6-201ENST00000266079 TRIM37O94972 964 aa15.62■□□□□ 0.09
PRPF6-201ENST00000266079 AAMPQ13685 434 aa15.62■□□□□ 0.09
PRPF6-201ENST00000266079 ERBB4Q15303 1308 aa15.61■□□□□ 0.09
PRPF6-201ENST00000266079 ITGB4P16144 1822 aa15.61■□□□□ 0.09
PRPF6-201ENST00000266079 ATP6V1AP38606 617 aa15.61■□□□□ 0.09
PRPF6-201ENST00000266079 PDZRN3Q9UPQ7 1066 aa15.61■□□□□ 0.09
PRPF6-201ENST00000266079 PI4KAP2A4QPH2 592 aa15.6■□□□□ 0.09
PRPF6-201ENST00000266079 TPM2P07951 284 aa15.6■□□□□ 0.09
PRPF6-201ENST00000266079 HOXB7P09629 217 aa15.6■□□□□ 0.09
PRPF6-201ENST00000266079 PI4KAP1Q8N8J0 262 aa15.6■□□□□ 0.09
PRPF6-201ENST00000266079 C1orf115Q9H7X2 142 aa15.6■□□□□ 0.09
PRPF6-201ENST00000266079 DDX11L8A8MPP1 907 aa15.6■□□□□ 0.09
PRPF6-201ENST00000266079 PDIA6Q15084 440 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms