RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 N4BP2Q86UW6 1770 aaPredicted RBP30.86■■■□□ 2.53
R3HCC1-201ENST00000265806 SLC4A10Q6U841 1118 aa30.85■■■□□ 2.53
R3HCC1-201ENST00000265806 ITGB4P16144 1822 aa30.85■■■□□ 2.53
R3HCC1-201ENST00000265806 PDIA6Q15084 440 aa30.84■■■□□ 2.53
R3HCC1-201ENST00000265806 LAMB4A4D0S4 1761 aa30.84■■■□□ 2.53
R3HCC1-201ENST00000265806 ANXA1P04083 346 aa30.83■■■□□ 2.53
R3HCC1-201ENST00000265806 PROSER3Q2NL68 480 aa30.83■■■□□ 2.53
R3HCC1-201ENST00000265806 PIGBQ92521 554 aa30.83■■■□□ 2.53
R3HCC1-201ENST00000265806 USP21Q9UK80 565 aa30.83■■■□□ 2.53
R3HCC1-201ENST00000265806 USP16Q9Y5T5 823 aa30.83■■■□□ 2.53
R3HCC1-201ENST00000265806 BCL9O00512 1426 aa30.82■■■□□ 2.52
R3HCC1-201ENST00000265806 MEX3CQ5U5Q3 659 aaKnown RBP30.79■■■□□ 2.52
R3HCC1-201ENST00000265806 ERBB4Q15303 1308 aa30.79■■■□□ 2.52
R3HCC1-201ENST00000265806 PI4KAP2A4QPH2 592 aa30.78■■■□□ 2.52
R3HCC1-201ENST00000265806 PI4KAP1Q8N8J0 262 aa30.78■■■□□ 2.52
R3HCC1-201ENST00000265806 MARCH10Q8NA82 808 aaPredicted RBP30.78■■■□□ 2.52
R3HCC1-201ENST00000265806 DNAAF4Q8WXU2 420 aa30.78■■■□□ 2.52
R3HCC1-201ENST00000265806 MEIS3Q99687 375 aa30.78■■■□□ 2.52
R3HCC1-201ENST00000265806 ADCY9O60503 1353 aa30.78■■■□□ 2.52
R3HCC1-201ENST00000265806 C1orf115Q9H7X2 142 aa30.77■■■□□ 2.52
R3HCC1-201ENST00000265806 FAM98CQ17RN3 349 aaKnown RBP30.77■■■□□ 2.52
R3HCC1-201ENST00000265806 ATG3Q9NT62 314 aa30.76■■■□□ 2.51
R3HCC1-201ENST00000265806 DOT1LQ8TEK3 1739 aa30.76■■■□□ 2.51
R3HCC1-201ENST00000265806 ATP10DQ9P241 1426 aa30.75■■■□□ 2.51
R3HCC1-201ENST00000265806 PTCD1O75127 700 aaKnown RBP30.75■■■□□ 2.51
R3HCC1-201ENST00000265806 KSR2Q6VAB6 950 aa30.75■■■□□ 2.51
R3HCC1-201ENST00000265806 LRP10Q7Z4F1 713 aa30.75■■■□□ 2.51
R3HCC1-201ENST00000265806 ASAP1Q9ULH1 1129 aa30.75■■■□□ 2.51
R3HCC1-201ENST00000265806 DDX58O95786 925 aaKnown RBP30.74■■■□□ 2.51
R3HCC1-201ENST00000265806 VSIG10Q8N0Z9 540 aa30.74■■■□□ 2.51
R3HCC1-201ENST00000265806 SMC5Q8IY18 1101 aa30.74■■■□□ 2.51
R3HCC1-201ENST00000265806 TSHZ2Q9NRE2 1034 aa30.74■■■□□ 2.51
R3HCC1-201ENST00000265806 SRCIN1Q9C0H9 1055 aa30.73■■■□□ 2.51
R3HCC1-201ENST00000265806 GNAI3P08754 354 aa30.72■■■□□ 2.51
R3HCC1-201ENST00000265806 BEND3Q5T5X7 828 aa30.72■■■□□ 2.51
R3HCC1-201ENST00000265806 AFF2P51816 1311 aa30.72■■■□□ 2.51
R3HCC1-201ENST00000265806 PRIM1P49642 420 aaKnown RBP30.71■■■□□ 2.51
R3HCC1-201ENST00000265806 SIRT2Q8IXJ6 389 aa30.71■■■□□ 2.51
R3HCC1-201ENST00000265806 RPAP2Q8IXW5 612 aaPredicted RBP30.71■■■□□ 2.51
R3HCC1-201ENST00000265806 KAT6BQ8WYB5 2073 aa30.71■■■□□ 2.51
R3HCC1-201ENST00000265806 MYL6BP14649 208 aa30.71■■■□□ 2.51
R3HCC1-201ENST00000265806 SKAP1Q86WV1 359 aa30.71■■■□□ 2.51
R3HCC1-201ENST00000265806 TEX13AQ9BXU3 409 aaPredicted RBP30.7■■■□□ 2.51
R3HCC1-201ENST00000265806 MAP3K2Q9Y2U5 619 aa30.7■■■□□ 2.51
R3HCC1-201ENST00000265806 ANKRD44Q8N8A2 993 aa30.69■■■□□ 2.5
R3HCC1-201ENST00000265806 THSD7AQ9UPZ6 1657 aa30.69■■■□□ 2.5
R3HCC1-201ENST00000265806 XAGE3Q8WTP9 111 aa30.69■■■□□ 2.5
R3HCC1-201ENST00000265806 SYTL4Q96C24 671 aaPredicted RBP30.69■■■□□ 2.5
R3HCC1-201ENST00000265806 CEP85Q6P2H3 762 aa30.68■■■□□ 2.5
R3HCC1-201ENST00000265806 USP44Q9H0E7 712 aa30.68■■■□□ 2.5
R3HCC1-201ENST00000265806 AIMP1Q12904 312 aaKnown RBP30.67■■■□□ 2.5
R3HCC1-201ENST00000265806 COPS6Q7L5N1 327 aa30.67■■■□□ 2.5
R3HCC1-201ENST00000265806 GJD4Q96KN9 370 aaPredicted RBP30.67■■■□□ 2.5
R3HCC1-201ENST00000265806 PDZRN3Q9UPQ7 1066 aa30.67■■■□□ 2.5
R3HCC1-201ENST00000265806 ATRNO75882 1429 aa30.67■■■□□ 2.5
R3HCC1-201ENST00000265806 GNAI2P04899 355 aa30.66■■■□□ 2.5
R3HCC1-201ENST00000265806 NBPF26B4DH59 902 aa30.66■■■□□ 2.5
R3HCC1-201ENST00000265806 ALDH1L1O75891 902 aa30.66■■■□□ 2.5
R3HCC1-201ENST00000265806 NBPF14Q5TI25 921 aa30.66■■■□□ 2.5
R3HCC1-201ENST00000265806 NBPF10Q6P3W6 841 aaKnown RBP30.66■■■□□ 2.5
R3HCC1-201ENST00000265806 NBPF15Q8N660 670 aa30.66■■■□□ 2.5
R3HCC1-201ENST00000265806 GCC1Q96CN9 775 aa30.66■■■□□ 2.5
R3HCC1-201ENST00000265806 IBTKQ9P2D0 1353 aaPredicted RBP30.65■■■□□ 2.5
R3HCC1-201ENST00000265806 TRPC5Q9UL62 973 aaPredicted RBP30.64■■■□□ 2.5
R3HCC1-201ENST00000265806 RIC3Q7Z5B4 369 aa30.64■■■□□ 2.49
R3HCC1-201ENST00000265806 PIP4K2AP48426 406 aaPredicted RBP30.63■■■□□ 2.49
R3HCC1-201ENST00000265806 LINS1Q8NG48 757 aa30.63■■■□□ 2.49
R3HCC1-201ENST00000265806 RBM42Q9BTD8 480 aaKnown RBP30.63■■■□□ 2.49
R3HCC1-201ENST00000265806 A1BGP04217 495 aa30.62■■■□□ 2.49
R3HCC1-201ENST00000265806 ANKRD13DQ6ZTN6 518 aa30.62■■■□□ 2.49
R3HCC1-201ENST00000265806 UBTFL1P0CB47 393 aaPredicted RBP30.61■■■□□ 2.49
R3HCC1-201ENST00000265806 DNAJC10Q8IXB1 793 aa30.61■■■□□ 2.49
R3HCC1-201ENST00000265806 ACSBG1Q96GR2 724 aa30.61■■■□□ 2.49
R3HCC1-201ENST00000265806 RGS3P49796 1198 aa30.61■■■□□ 2.49
R3HCC1-201ENST00000265806 ONECUT3O60422 494 aaPredicted RBP30.6■■■□□ 2.49
R3HCC1-201ENST00000265806 STARD3NLO95772 234 aa30.6■■■□□ 2.49
R3HCC1-201ENST00000265806 SLC4A9Q96Q91 983 aa30.59■■■□□ 2.49
R3HCC1-201ENST00000265806 METTL22Q9BUU2 404 aaPredicted RBP30.59■■■□□ 2.49
R3HCC1-201ENST00000265806 A0A0G2JS52 829 aa30.59■■■□□ 2.49
R3HCC1-201ENST00000265806 MYT1Q01538 1121 aa30.59■■■□□ 2.49
R3HCC1-201ENST00000265806 NUCB1Q02818 461 aa30.59■■■□□ 2.49
R3HCC1-201ENST00000265806 DCTPP1Q9H773 170 aa30.59■■■□□ 2.49
R3HCC1-201ENST00000265806 HMMRO75330 724 aa30.58■■■□□ 2.49
R3HCC1-201ENST00000265806 PLBD2Q8NHP8 589 aa30.58■■■□□ 2.49
R3HCC1-201ENST00000265806 NEXNQ0ZGT2 675 aa30.57■■■□□ 2.48
R3HCC1-201ENST00000265806 LRRFIP2Q9Y608 721 aaKnown RBP30.56■■■□□ 2.48
R3HCC1-201ENST00000265806 ARFGEF2Q9Y6D5 1785 aa30.55■■■□□ 2.48
R3HCC1-201ENST00000265806 NBPF7P0C2Y1 421 aaPredicted RBP30.55■■■□□ 2.48
R3HCC1-201ENST00000265806 CWF19L2Q2TBE0 894 aaKnown RBP30.55■■■□□ 2.48
R3HCC1-201ENST00000265806 IGKV5-2P06315 115 aa30.54■■■□□ 2.48
R3HCC1-201ENST00000265806 ATP8B2P98198 1209 aa30.54■■■□□ 2.48
R3HCC1-201ENST00000265806 TJP1Q07157 1748 aa30.54■■■□□ 2.48
R3HCC1-201ENST00000265806 UTYO14607 1347 aa30.54■■■□□ 2.48
R3HCC1-201ENST00000265806 CYP19A1P11511 503 aaPredicted RBP30.54■■■□□ 2.48
R3HCC1-201ENST00000265806 SMARCC1Q92922 1105 aaPredicted RBP30.54■■■□□ 2.48
R3HCC1-201ENST00000265806 HDAC5Q9UQL6 1122 aa30.54■■■□□ 2.48
R3HCC1-201ENST00000265806 CHD1LQ86WJ1 897 aa30.53■■■□□ 2.48
R3HCC1-201ENST00000265806 CICQ96RK0 1608 aaPredicted RBP30.52■■■□□ 2.48
R3HCC1-201ENST00000265806 NEURL1BA8MQ27 555 aa30.52■■■□□ 2.48
R3HCC1-201ENST00000265806 MYD88Q99836 296 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms