RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 UBR3Q6ZT12 1888 aa18.51■□□□□ 0.55
SSBP1-201ENST00000265304 C4BP0C0L5 1744 aa18.51■□□□□ 0.55
SSBP1-201ENST00000265304 CNTNAP4Q9C0A0 1308 aa18.5■□□□□ 0.55
SSBP1-201ENST00000265304 CT47B1P0C2W7 299 aaPredicted RBP18.5■□□□□ 0.55
SSBP1-201ENST00000265304 DNAJC10Q8IXB1 793 aa18.5■□□□□ 0.55
SSBP1-201ENST00000265304 CHMP4AQ9BY43 222 aa18.5■□□□□ 0.55
SSBP1-201ENST00000265304 USP16Q9Y5T5 823 aa18.5■□□□□ 0.55
SSBP1-201ENST00000265304 ERBB4Q15303 1308 aa18.49■□□□□ 0.55
SSBP1-201ENST00000265304 VAMP4O75379 141 aa18.48■□□□□ 0.55
SSBP1-201ENST00000265304 STARD3NLO95772 234 aa18.48■□□□□ 0.55
SSBP1-201ENST00000265304 EXOSC9Q06265 439 aaKnown RBP18.48■□□□□ 0.55
SSBP1-201ENST00000265304 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
SSBP1-201ENST00000265304 INTS5Q6P9B9 1019 aaKnown RBP18.48■□□□□ 0.55
SSBP1-201ENST00000265304 LINC00116Q8NCU8 138 aa18.48■□□□□ 0.55
SSBP1-201ENST00000265304 AKT1S1Q96B36 256 aa18.48■□□□□ 0.55
SSBP1-201ENST00000265304 ZNF428Q96B54 188 aa18.48■□□□□ 0.55
SSBP1-201ENST00000265304 PRAMEF22A3QJZ6 481 aa18.47■□□□□ 0.55
SSBP1-201ENST00000265304 TSPYL6Q8N831 410 aa18.47■□□□□ 0.55
SSBP1-201ENST00000265304 TUBGCP6Q96RT7 1819 aa18.46■□□□□ 0.55
SSBP1-201ENST00000265304 CRKLP46109 303 aaKnown RBP18.45■□□□□ 0.54
SSBP1-201ENST00000265304 KCNQ4P56696 695 aa18.45■□□□□ 0.54
SSBP1-201ENST00000265304 PDIA6Q15084 440 aa18.45■□□□□ 0.54
SSBP1-201ENST00000265304 TWISTNBQ3B726 338 aaPredicted RBP18.45■□□□□ 0.54
SSBP1-201ENST00000265304 LRP10Q7Z4F1 713 aa18.45■□□□□ 0.54
SSBP1-201ENST00000265304 RPS6KA4O75676 772 aa18.44■□□□□ 0.54
SSBP1-201ENST00000265304 CCDC87Q9NVE4 849 aa18.44■□□□□ 0.54
SSBP1-201ENST00000265304 NBPF26B4DH59 902 aa18.43■□□□□ 0.54
SSBP1-201ENST00000265304 EIF5P55010 431 aaKnown RBP18.43■□□□□ 0.54
SSBP1-201ENST00000265304 NBPF14Q5TI25 921 aa18.43■□□□□ 0.54
SSBP1-201ENST00000265304 NBPF10Q6P3W6 841 aaKnown RBP18.43■□□□□ 0.54
SSBP1-201ENST00000265304 NBPF15Q8N660 670 aa18.43■□□□□ 0.54
SSBP1-201ENST00000265304 IL6STP40189 918 aaPredicted RBP18.42■□□□□ 0.54
SSBP1-201ENST00000265304 BRPF1P55201 1214 aaPredicted RBP18.42■□□□□ 0.54
SSBP1-201ENST00000265304 SLC15A2Q16348 729 aa18.42■□□□□ 0.54
SSBP1-201ENST00000265304 DDX21Q9NR30 783 aaKnown RBP eCLIP18.42■□□□□ 0.54
SSBP1-201ENST00000265304 A1BGP04217 495 aa18.41■□□□□ 0.54
SSBP1-201ENST00000265304 CCDC30Q5VVM6 783 aa18.41■□□□□ 0.54
SSBP1-201ENST00000265304 ANO8Q9HCE9 1232 aaPredicted RBP18.41■□□□□ 0.54
SSBP1-201ENST00000265304 ELL2O00472 640 aaPredicted RBP18.4■□□□□ 0.54
SSBP1-201ENST00000265304 RGL2O15211 777 aa18.4■□□□□ 0.54
SSBP1-201ENST00000265304 SSFA2P28290 1259 aa18.4■□□□□ 0.54
SSBP1-201ENST00000265304 ZNF827Q17R98 1081 aa18.4■□□□□ 0.54
SSBP1-201ENST00000265304 HDGFL1Q5TGJ6 251 aa18.4■□□□□ 0.54
SSBP1-201ENST00000265304 DBF4Q9UBU7 674 aaPredicted RBP18.4■□□□□ 0.54
SSBP1-201ENST00000265304 ZBTB1Q9Y2K1 713 aa18.4■□□□□ 0.54
SSBP1-201ENST00000265304 ALDH1L2Q3SY69 923 aa18.39■□□□□ 0.53
SSBP1-201ENST00000265304 FLAD1Q8NFF5 587 aa18.39■□□□□ 0.53
SSBP1-201ENST00000265304 C4AP0C0L4 1744 aa18.38■□□□□ 0.53
SSBP1-201ENST00000265304 AMIGO3Q86WK7 504 aa18.38■□□□□ 0.53
SSBP1-201ENST00000265304 COL24A1Q17RW2 1714 aa18.37■□□□□ 0.53
SSBP1-201ENST00000265304 EIF2S2P20042 333 aaKnown RBP18.37■□□□□ 0.53
SSBP1-201ENST00000265304 YTHDC1Q96MU7 727 aaKnown RBP18.37■□□□□ 0.53
SSBP1-201ENST00000265304 HYPKQ9NX55 129 aa18.37■□□□□ 0.53
SSBP1-201ENST00000265304 STK32BQ9NY57 414 aa18.37■□□□□ 0.53
SSBP1-201ENST00000265304 RTCBQ9Y3I0 505 aaKnown RBP18.37■□□□□ 0.53
SSBP1-201ENST00000265304 AK7Q96M32 723 aa18.36■□□□□ 0.53
SSBP1-201ENST00000265304 CHPF2Q9P2E5 772 aa18.36■□□□□ 0.53
SSBP1-201ENST00000265304 CASZ1Q86V15 1759 aa18.35■□□□□ 0.53
SSBP1-201ENST00000265304 PNPLA7Q6ZV29 1317 aa18.35■□□□□ 0.53
SSBP1-201ENST00000265304 GNPATO15228 680 aa18.35■□□□□ 0.53
SSBP1-201ENST00000265304 RARSP54136 660 aaKnown RBP18.35■□□□□ 0.53
SSBP1-201ENST00000265304 PROSER3Q2NL68 480 aa18.35■□□□□ 0.53
SSBP1-201ENST00000265304 NUP98P52948 1817 aa18.35■□□□□ 0.53
SSBP1-201ENST00000265304 A0A087WZG4 1122 aa18.34■□□□□ 0.53
SSBP1-201ENST00000265304 SSH1Q8WYL5 1049 aa18.34■□□□□ 0.53
SSBP1-201ENST00000265304 BCORQ6W2J9 1755 aa18.34■□□□□ 0.53
SSBP1-201ENST00000265304 COL15A1P39059 1388 aa18.33■□□□□ 0.53
SSBP1-201ENST00000265304 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.33■□□□□ 0.52
SSBP1-201ENST00000265304 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.52
SSBP1-201ENST00000265304 TRAPPC3LQ5T215 181 aa18.33■□□□□ 0.52
SSBP1-201ENST00000265304 MRPL50Q8N5N7 158 aaKnown RBP18.33■□□□□ 0.52
SSBP1-201ENST00000265304 ARHGEF1Q92888 912 aaKnown RBP18.33■□□□□ 0.52
SSBP1-201ENST00000265304 TFCP2L1Q9NZI6 479 aa18.33■□□□□ 0.52
SSBP1-201ENST00000265304 ERVV-1B6SEH8 477 aa18.32■□□□□ 0.52
SSBP1-201ENST00000265304 SLC4A2P04920 1241 aa18.32■□□□□ 0.52
SSBP1-201ENST00000265304 COL23A1Q86Y22 540 aaPredicted RBP18.32■□□□□ 0.52
SSBP1-201ENST00000265304 SLC16A10Q8TF71 515 aa18.32■□□□□ 0.52
SSBP1-201ENST00000265304 STK31Q9BXU1 1019 aa18.32■□□□□ 0.52
SSBP1-201ENST00000265304 NARFQ9UHQ1 456 aa18.32■□□□□ 0.52
SSBP1-201ENST00000265304 SCN7AQ01118 1682 aa18.31■□□□□ 0.52
SSBP1-201ENST00000265304 USP42Q9H9J4 1324 aaKnown RBP18.3■□□□□ 0.52
SSBP1-201ENST00000265304 PIP4K2AP48426 406 aaPredicted RBP18.3■□□□□ 0.52
SSBP1-201ENST00000265304 CLEC4GQ6UXB4 293 aa18.3■□□□□ 0.52
SSBP1-201ENST00000265304 NECTIN2Q92692 538 aa18.3■□□□□ 0.52
SSBP1-201ENST00000265304 CAMTA2O94983 1202 aa18.29■□□□□ 0.52
SSBP1-201ENST00000265304 ANXA1P04083 346 aa18.29■□□□□ 0.52
SSBP1-201ENST00000265304 MYL6BP14649 208 aa18.29■□□□□ 0.52
SSBP1-201ENST00000265304 COPS6Q7L5N1 327 aa18.29■□□□□ 0.52
SSBP1-201ENST00000265304 PHAXQ9H814 394 aaKnown RBP18.29■□□□□ 0.52
SSBP1-201ENST00000265304 BCL2L12Q9HB09 334 aa18.29■□□□□ 0.52
SSBP1-201ENST00000265304 MAP3K15Q6ZN16 1313 aa18.28■□□□□ 0.52
SSBP1-201ENST00000265304 ANKRD36CQ5JPF3 1778 aa18.28■□□□□ 0.52
SSBP1-201ENST00000265304 ARFGEF2Q9Y6D5 1785 aa18.28■□□□□ 0.52
SSBP1-201ENST00000265304 TTLL7Q6ZT98 887 aa18.28■□□□□ 0.52
SSBP1-201ENST00000265304 G2E3Q7L622 706 aa18.28■□□□□ 0.52
SSBP1-201ENST00000265304 XAGE3Q8WTP9 111 aa18.28■□□□□ 0.52
SSBP1-201ENST00000265304 ARHGAP45Q92619 1136 aa18.28■□□□□ 0.52
SSBP1-201ENST00000265304 IBTKQ9P2D0 1353 aaPredicted RBP18.28■□□□□ 0.52
SSBP1-201ENST00000265304 RFC4P35249 363 aa18.27■□□□□ 0.52
SSBP1-201ENST00000265304 FLIIQ13045 1269 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms