RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 USP16Q9Y5T5 823 aa28.91■■■□□ 2.22
UFD1-201ENST00000263202 SBF2Q86WG5 1849 aa28.9■■■□□ 2.22
UFD1-201ENST00000263202 RGS12O14924 1447 aa28.9■■■□□ 2.22
UFD1-201ENST00000263202 RBM6P78332 1123 aaKnown RBP28.9■■■□□ 2.22
UFD1-201ENST00000263202 DBF4Q9UBU7 674 aaPredicted RBP28.9■■■□□ 2.22
UFD1-201ENST00000263202 NHSQ6T4R5 1651 aa28.89■■■□□ 2.22
UFD1-201ENST00000263202 FLIIQ13045 1269 aa28.88■■■□□ 2.21
UFD1-201ENST00000263202 ABCC4O15439 1325 aa28.88■■■□□ 2.21
UFD1-201ENST00000263202 KCNQ2O43526 872 aa28.87■■■□□ 2.21
UFD1-201ENST00000263202 MVPQ14764 893 aaKnown RBP28.87■■■□□ 2.21
UFD1-201ENST00000263202 FAM182BQ5T319 152 aa28.87■■■□□ 2.21
UFD1-201ENST00000263202 TMEM57Q8N5G2 664 aa28.87■■■□□ 2.21
UFD1-201ENST00000263202 VSIG10Q8N0Z9 540 aa28.86■■■□□ 2.21
UFD1-201ENST00000263202 PHAXQ9H814 394 aaKnown RBP28.86■■■□□ 2.21
UFD1-201ENST00000263202 PDIA6Q15084 440 aa28.85■■■□□ 2.21
UFD1-201ENST00000263202 DDX21Q9NR30 783 aaKnown RBP eCLIP28.85■■■□□ 2.21
UFD1-201ENST00000263202 ANXA1P04083 346 aa28.85■■■□□ 2.21
UFD1-201ENST00000263202 PROSER3Q2NL68 480 aa28.85■■■□□ 2.21
UFD1-201ENST00000263202 RBM42Q9BTD8 480 aaKnown RBP28.84■■■□□ 2.21
UFD1-201ENST00000263202 BTAF1O14981 1849 aa28.84■■■□□ 2.21
UFD1-201ENST00000263202 TJP1Q07157 1748 aa28.83■■■□□ 2.21
UFD1-201ENST00000263202 RGS17Q9UGC6 210 aaPredicted RBP28.83■■■□□ 2.21
UFD1-201ENST00000263202 ITPRIPQ8IWB1 547 aa28.83■■■□□ 2.21
UFD1-201ENST00000263202 HYPKQ9NX55 129 aa28.83■■■□□ 2.21
UFD1-201ENST00000263202 FKBP5Q13451 457 aaPredicted RBP28.82■■■□□ 2.2
UFD1-201ENST00000263202 N4BP2Q86UW6 1770 aaPredicted RBP28.82■■■□□ 2.2
UFD1-201ENST00000263202 SLC4A9Q96Q91 983 aa28.8■■■□□ 2.2
UFD1-201ENST00000263202 KRT27Q7Z3Y8 459 aa28.8■■■□□ 2.2
UFD1-201ENST00000263202 TEX13AQ9BXU3 409 aaPredicted RBP28.8■■■□□ 2.2
UFD1-201ENST00000263202 DDX19BQ9UMR2 479 aa28.8■■■□□ 2.2
UFD1-201ENST00000263202 CICQ96RK0 1608 aaPredicted RBP28.79■■■□□ 2.2
UFD1-201ENST00000263202 ERBB4Q15303 1308 aa28.79■■■□□ 2.2
UFD1-201ENST00000263202 RXRBP28702 533 aa28.79■■■□□ 2.2
UFD1-201ENST00000263202 F6X3S4 739 aa28.78■■■□□ 2.2
UFD1-201ENST00000263202 INTS3Q68E01 1043 aaKnown RBP28.78■■■□□ 2.2
UFD1-201ENST00000263202 DNAJC10Q8IXB1 793 aa28.78■■■□□ 2.2
UFD1-201ENST00000263202 B4GALNT3Q6L9W6 998 aa28.78■■■□□ 2.2
UFD1-201ENST00000263202 PTF1AQ7RTS3 328 aa28.78■■■□□ 2.2
UFD1-201ENST00000263202 SMARCC1Q92922 1105 aaPredicted RBP28.78■■■□□ 2.2
UFD1-201ENST00000263202 PALLDQ8WX93 1383 aa28.78■■■□□ 2.2
UFD1-201ENST00000263202 ZNF831Q5JPB2 1677 aa28.77■■■□□ 2.2
UFD1-201ENST00000263202 MYL6BP14649 208 aa28.77■■■□□ 2.2
UFD1-201ENST00000263202 LRP10Q7Z4F1 713 aa28.77■■■□□ 2.2
UFD1-201ENST00000263202 PIP4K2AP48426 406 aaPredicted RBP28.76■■■□□ 2.19
UFD1-201ENST00000263202 AAMPQ13685 434 aa28.76■■■□□ 2.19
UFD1-201ENST00000263202 PXDNLA1KZ92 1463 aa28.75■■■□□ 2.19
UFD1-201ENST00000263202 NBPF26B4DH59 902 aa28.75■■■□□ 2.19
UFD1-201ENST00000263202 A1BGP04217 495 aa28.75■■■□□ 2.19
UFD1-201ENST00000263202 NBPF14Q5TI25 921 aa28.75■■■□□ 2.19
UFD1-201ENST00000263202 NBPF10Q6P3W6 841 aaKnown RBP28.75■■■□□ 2.19
UFD1-201ENST00000263202 NBPF15Q8N660 670 aa28.75■■■□□ 2.19
UFD1-201ENST00000263202 CCDC136Q96JN2 1154 aa28.75■■■□□ 2.19
UFD1-201ENST00000263202 POTEAQ6S8J7 498 aa28.74■■■□□ 2.19
UFD1-201ENST00000263202 ADCY9O60503 1353 aa28.73■■■□□ 2.19
UFD1-201ENST00000263202 LOC102724428A0A0B4J2F2 783 aa28.73■■■□□ 2.19
UFD1-201ENST00000263202 STARD3NLO95772 234 aa28.73■■■□□ 2.19
UFD1-201ENST00000263202 SIK1P57059 783 aa28.73■■■□□ 2.19
UFD1-201ENST00000263202 SLC4A10Q6U841 1118 aa28.73■■■□□ 2.19
UFD1-201ENST00000263202 FAM196AQ6ZSG2 479 aa28.72■■■□□ 2.19
UFD1-201ENST00000263202 PI4KAP2A4QPH2 592 aa28.71■■■□□ 2.19
UFD1-201ENST00000263202 ZBTB7BO15156 539 aaPredicted RBP28.71■■■□□ 2.19
UFD1-201ENST00000263202 CYP19A1P11511 503 aaPredicted RBP28.71■■■□□ 2.19
UFD1-201ENST00000263202 CCT4P50991 539 aaKnown RBP28.71■■■□□ 2.19
UFD1-201ENST00000263202 PI4KAP1Q8N8J0 262 aa28.71■■■□□ 2.19
UFD1-201ENST00000263202 XAGE3Q8WTP9 111 aa28.71■■■□□ 2.19
UFD1-201ENST00000263202 AIMP1Q12904 312 aaKnown RBP28.71■■■□□ 2.19
UFD1-201ENST00000263202 COL5A3P25940 1745 aaPredicted RBP28.71■■■□□ 2.19
UFD1-201ENST00000263202 LY75O60449 1722 aa28.7■■■□□ 2.18
UFD1-201ENST00000263202 KSR2Q6VAB6 950 aa28.7■■■□□ 2.18
UFD1-201ENST00000263202 COPS6Q7L5N1 327 aa28.7■■■□□ 2.18
UFD1-201ENST00000263202 ZBTB40Q9NUA8 1239 aa28.7■■■□□ 2.18
UFD1-201ENST00000263202 DDX58O95786 925 aaKnown RBP28.69■■■□□ 2.18
UFD1-201ENST00000263202 ATP6V1AP38606 617 aa28.69■■■□□ 2.18
UFD1-201ENST00000263202 DNAAF4Q8WXU2 420 aa28.69■■■□□ 2.18
UFD1-201ENST00000263202 BCL11BQ9C0K0 894 aaPredicted RBP28.69■■■□□ 2.18
UFD1-201ENST00000263202 ARFGEF2Q9Y6D5 1785 aa28.68■■■□□ 2.18
UFD1-201ENST00000263202 RREB1Q92766 1687 aa28.68■■■□□ 2.18
UFD1-201ENST00000263202 CHMP4BQ9H444 224 aaKnown RBP28.68■■■□□ 2.18
UFD1-201ENST00000263202 MAP3K2Q9Y2U5 619 aa28.67■■■□□ 2.18
UFD1-201ENST00000263202 ITPK1Q13572 414 aa28.66■■■□□ 2.18
UFD1-201ENST00000263202 ATP10DQ9P241 1426 aa28.65■■■□□ 2.18
UFD1-201ENST00000263202 NUP188Q5SRE5 1749 aa28.65■■■□□ 2.18
UFD1-201ENST00000263202 PCDHB15Q9Y5E8 787 aa28.64■■■□□ 2.18
UFD1-201ENST00000263202 MYH14Q7Z406 1995 aaKnown RBP28.63■■■□□ 2.17
UFD1-201ENST00000263202 BEND3Q5T5X7 828 aa28.63■■■□□ 2.17
UFD1-201ENST00000263202 ANKRD13DQ6ZTN6 518 aa28.63■■■□□ 2.17
UFD1-201ENST00000263202 RIC3Q7Z5B4 369 aa28.63■■■□□ 2.17
UFD1-201ENST00000263202 SRCIN1Q9C0H9 1055 aa28.62■■■□□ 2.17
UFD1-201ENST00000263202 ZBTB1Q9Y2K1 713 aa28.62■■■□□ 2.17
UFD1-201ENST00000263202 TAF1LQ8IZX4 1826 aa28.61■■■□□ 2.17
UFD1-201ENST00000263202 TTLL7Q6ZT98 887 aa28.6■■■□□ 2.17
UFD1-201ENST00000263202 PLBD2Q8NHP8 589 aa28.6■■■□□ 2.17
UFD1-201ENST00000263202 MEIS3Q99687 375 aa28.6■■■□□ 2.17
UFD1-201ENST00000263202 TRIM37O94972 964 aa28.59■■■□□ 2.17
UFD1-201ENST00000263202 CRKLP46109 303 aaKnown RBP28.59■■■□□ 2.17
UFD1-201ENST00000263202 INTS5Q6P9B9 1019 aaKnown RBP28.59■■■□□ 2.17
UFD1-201ENST00000263202 CCDC87Q9NVE4 849 aa28.59■■■□□ 2.17
UFD1-201ENST00000263202 AFDNP55196 1824 aaKnown RBP28.58■■■□□ 2.17
UFD1-201ENST00000263202 METTL22Q9BUU2 404 aaPredicted RBP28.58■■■□□ 2.17
UFD1-201ENST00000263202 IL6STP40189 918 aaPredicted RBP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 282.4 ms