RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 ISM2Q6H9L7 571 aa15.9■□□□□ 0.14
TCF3-201ENST00000262965 MPRIPQ6WCQ1 1025 aa15.9■□□□□ 0.14
TCF3-201ENST00000262965 PROSER2Q86WR7 435 aaPredicted RBP15.9■□□□□ 0.14
TCF3-201ENST00000262965 DEF6Q9H4E7 631 aa15.9■□□□□ 0.14
TCF3-201ENST00000262965 ZHX3Q9H4I2 956 aa15.9■□□□□ 0.14
TCF3-201ENST00000262965 PPP4R3BQ5MIZ7 849 aa15.9■□□□□ 0.14
TCF3-201ENST00000262965 POLR3GO15318 223 aaPredicted RBP15.89■□□□□ 0.13
TCF3-201ENST00000262965 CDK5RAP3Q96JB5 506 aa15.89■□□□□ 0.13
TCF3-201ENST00000262965 SH2B1Q9NRF2 756 aaPredicted RBP15.89■□□□□ 0.13
TCF3-201ENST00000262965 SHANK2Q9UPX8 1470 aa15.89■□□□□ 0.13
TCF3-201ENST00000262965 TDO2P48775 406 aa15.89■□□□□ 0.13
TCF3-201ENST00000262965 TMCO3Q6UWJ1 677 aa15.89■□□□□ 0.13
TCF3-201ENST00000262965 CBFA2T2O43439 604 aa15.89■□□□□ 0.13
TCF3-201ENST00000262965 PPP1R42Q7Z4L9 355 aa15.89■□□□□ 0.13
TCF3-201ENST00000262965 RAB11FIP4Q86YS3 637 aa15.89■□□□□ 0.13
TCF3-201ENST00000262965 ZGPATQ8N5A5 531 aaKnown RBP15.89■□□□□ 0.13
TCF3-201ENST00000262965 DNAAF4Q8WXU2 420 aa15.88■□□□□ 0.13
TCF3-201ENST00000262965 NACAP1Q9BZK3 213 aa15.88■□□□□ 0.13
TCF3-201ENST00000262965 A2MP01023 1474 aa15.88■□□□□ 0.13
TCF3-201ENST00000262965 ANO10Q9NW15 660 aa15.88■□□□□ 0.13
TCF3-201ENST00000262965 CGNQ9P2M7 1197 aaKnown RBP15.88■□□□□ 0.13
TCF3-201ENST00000262965 CTNNA3Q9UI47 895 aa15.88■□□□□ 0.13
TCF3-201ENST00000262965 TOM1L2Q6ZVM7 507 aa15.88■□□□□ 0.13
TCF3-201ENST00000262965 MPHOSPH8Q99549 860 aa15.88■□□□□ 0.13
TCF3-201ENST00000262965 PARD3Q8TEW0 1356 aa15.88■□□□□ 0.13
TCF3-201ENST00000262965 ATP2B2Q01814 1243 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 LRSAM1Q6UWE0 723 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 FSIP1Q8NA03 581 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 C8orf58Q8NAV2 365 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 JARID2Q92833 1246 aaPredicted RBP15.87■□□□□ 0.13
TCF3-201ENST00000262965 CNPY2Q9Y2B0 182 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 ERLIN1O75477 346 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 MYD88Q99836 296 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 TANGO6Q9C0B7 1094 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 SMTNL1A8MU46 457 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 ANKLE2Q86XL3 938 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 CPLX3Q8WVH0 158 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 C8orf76Q96K31 380 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 TESK2Q96S53 571 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 UBAC1Q9BSL1 405 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 DACH1Q9UI36 760 aa15.87■□□□□ 0.13
TCF3-201ENST00000262965 SCAF11Q99590 1463 aaKnown RBP15.87■□□□□ 0.13
TCF3-201ENST00000262965 FAM135AQ9P2D6 1515 aa15.86■□□□□ 0.13
TCF3-201ENST00000262965 EPB41L2O43491 1005 aaKnown RBP15.86■□□□□ 0.13
TCF3-201ENST00000262965 IMMTQ16891 758 aaKnown RBP15.86■□□□□ 0.13
TCF3-201ENST00000262965 ABCF2Q9UG63 623 aa15.86■□□□□ 0.13
TCF3-201ENST00000262965 U3KPZ7 1027 aaPredicted RBP15.86■□□□□ 0.13
TCF3-201ENST00000262965 PI4KAP2A4QPH2 592 aa15.86■□□□□ 0.13
TCF3-201ENST00000262965 SSBP05455 408 aaKnown RBP eCLIP15.86■□□□□ 0.13
TCF3-201ENST00000262965 KRT24Q2M2I5 525 aa15.86■□□□□ 0.13
TCF3-201ENST00000262965 TSPYL6Q8N831 410 aa15.86■□□□□ 0.13
TCF3-201ENST00000262965 PI4KAP1Q8N8J0 262 aa15.86■□□□□ 0.13
TCF3-201ENST00000262965 RRAGDQ9NQL2 400 aaPredicted RBP15.86■□□□□ 0.13
TCF3-201ENST00000262965 ECHDC1Q9NTX5 307 aa15.86■□□□□ 0.13
TCF3-201ENST00000262965 KRT18P05783 430 aaKnown RBP15.86■□□□□ 0.13
TCF3-201ENST00000262965 HSP90AB2PQ58FF8 381 aa15.86■□□□□ 0.13
TCF3-201ENST00000262965 CCDC181Q5TID7 509 aa15.86■□□□□ 0.13
TCF3-201ENST00000262965 PIP4K2AP48426 406 aaPredicted RBP15.86■□□□□ 0.13
TCF3-201ENST00000262965 CCAR1Q8IX12 1150 aaKnown RBP15.86■□□□□ 0.13
TCF3-201ENST00000262965 ABCC10Q5T3U5 1492 aa15.85■□□□□ 0.13
TCF3-201ENST00000262965 TEX14Q8IWB6 1497 aa15.85■□□□□ 0.13
TCF3-201ENST00000262965 PDE1AP54750 535 aa15.85■□□□□ 0.13
TCF3-201ENST00000262965 LRRC2Q9BYS8 371 aa15.85■□□□□ 0.13
TCF3-201ENST00000262965 CTDP1Q9Y5B0 961 aaPredicted RBP15.85■□□□□ 0.13
TCF3-201ENST00000262965 CDKL5O76039 1030 aa15.85■□□□□ 0.13
TCF3-201ENST00000262965 UBE2HP62256 183 aa15.85■□□□□ 0.13
TCF3-201ENST00000262965 NOS1P29475 1434 aa15.85■□□□□ 0.13
TCF3-201ENST00000262965 SNRKQ9NRH2 765 aa15.85■□□□□ 0.13
TCF3-201ENST00000262965 EIF3JO75822 258 aaKnown RBP15.84■□□□□ 0.13
TCF3-201ENST00000262965 IFIT1P09914 478 aaKnown RBP15.84■□□□□ 0.13
TCF3-201ENST00000262965 USP48Q86UV5 1035 aa15.84■□□□□ 0.13
TCF3-201ENST00000262965 PER1O15534 1290 aaPredicted RBP15.84■□□□□ 0.13
TCF3-201ENST00000262965 POLR3DP05423 398 aaPredicted RBP15.84■□□□□ 0.13
TCF3-201ENST00000262965 TOP1P11387 765 aaKnown RBP15.84■□□□□ 0.13
TCF3-201ENST00000262965 DNMT1P26358 1616 aaKnown RBP15.84■□□□□ 0.13
TCF3-201ENST00000262965 HAND2P61296 217 aa15.84■□□□□ 0.13
TCF3-201ENST00000262965 ZSWIM4Q9H7M6 989 aa15.84■□□□□ 0.13
TCF3-201ENST00000262965 IGSF3O75054 1194 aa15.84■□□□□ 0.13
TCF3-201ENST00000262965 ODF2Q5BJF6 829 aa15.84■□□□□ 0.13
TCF3-201ENST00000262965 TMC6Q7Z403 805 aa15.84■□□□□ 0.13
TCF3-201ENST00000262965 EIF5P55010 431 aaKnown RBP15.83■□□□□ 0.13
TCF3-201ENST00000262965 STIM1Q13586 685 aa15.83■□□□□ 0.13
TCF3-201ENST00000262965 KIF4BQ2VIQ3 1234 aa15.83■□□□□ 0.13
TCF3-201ENST00000262965 CCDC186Q7Z3E2 898 aa15.83■□□□□ 0.13
TCF3-201ENST00000262965 DDX19AQ9NUU7 478 aaKnown RBP15.83■□□□□ 0.13
TCF3-201ENST00000262965 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.13
TCF3-201ENST00000262965 DHX8Q14562 1220 aaKnown RBP15.83■□□□□ 0.12
TCF3-201ENST00000262965 AIDAQ96BJ3 306 aa15.83■□□□□ 0.12
TCF3-201ENST00000262965 LRP2BPQ9P2M1 347 aa15.83■□□□□ 0.12
TCF3-201ENST00000262965 MAGI3Q5TCQ9 1506 aa15.83■□□□□ 0.12
TCF3-201ENST00000262965 NOLC1Q14978 699 aaKnown RBP eCLIP15.83■□□□□ 0.12
TCF3-201ENST00000262965 UBE2Q2Q8WVN8 375 aa15.83■□□□□ 0.12
TCF3-201ENST00000262965 ZBTB9Q96C00 473 aa15.83■□□□□ 0.12
TCF3-201ENST00000262965 PODXL2Q9NZ53 605 aa15.83■□□□□ 0.12
TCF3-201ENST00000262965 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.83■□□□□ 0.12
TCF3-201ENST00000262965 V9GYY5 206 aaPredicted RBP15.83■□□□□ 0.12
TCF3-201ENST00000262965 DTNBO60941 627 aa15.82■□□□□ 0.12
TCF3-201ENST00000262965 RDXP35241 583 aaKnown RBP15.82■□□□□ 0.12
TCF3-201ENST00000262965 HSP90AA4PQ58FG1 418 aa15.82■□□□□ 0.12
TCF3-201ENST00000262965 LARP1Q6PKG0 1096 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms