RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 RILPL2Q969X0 211 aa28.3■■■□□ 2.12
CCM2L-201ENST00000262659 ERCC6LQ2NKX8 1250 aa28.3■■■□□ 2.12
CCM2L-201ENST00000262659 SYT10Q6XYQ8 523 aa28.3■■■□□ 2.12
CCM2L-201ENST00000262659 NRXN1Q9ULB1 1477 aa28.29■■■□□ 2.12
CCM2L-201ENST00000262659 MEIS3Q99687 375 aa28.29■■■□□ 2.12
CCM2L-201ENST00000262659 TRMT1Q9NXH9 659 aaKnown RBP28.29■■■□□ 2.12
CCM2L-201ENST00000262659 SMC3Q9UQE7 1217 aa28.29■■■□□ 2.12
CCM2L-201ENST00000262659 ZNF853P0CG23 659 aa28.29■■■□□ 2.12
CCM2L-201ENST00000262659 PNMA6AP0CW24 399 aaPredicted RBP28.29■■■□□ 2.12
CCM2L-201ENST00000262659 LIG1P18858 919 aa28.29■■■□□ 2.12
CCM2L-201ENST00000262659 NOP2P46087 812 aaKnown RBP28.29■■■□□ 2.12
CCM2L-201ENST00000262659 TMX1Q9H3N1 280 aa28.29■■■□□ 2.12
CCM2L-201ENST00000262659 NEURL4Q96JN8 1562 aa28.28■■■□□ 2.12
CCM2L-201ENST00000262659 CLCN6P51797 869 aa28.28■■■□□ 2.12
CCM2L-201ENST00000262659 EFCAB2Q5VUJ9 269 aa28.28■■■□□ 2.12
CCM2L-201ENST00000262659 NFE2L2Q16236 605 aa28.28■■■□□ 2.12
CCM2L-201ENST00000262659 IL25Q9H293 177 aa28.27■■■□□ 2.12
CCM2L-201ENST00000262659 MSH6P52701 1360 aa28.27■■■□□ 2.12
CCM2L-201ENST00000262659 POLR3GO15318 223 aaPredicted RBP28.27■■■□□ 2.12
CCM2L-201ENST00000262659 KRBA2Q6ZNG9 492 aa28.27■■■□□ 2.12
CCM2L-201ENST00000262659 TDRD7Q8NHU6 1098 aaKnown RBP28.27■■■□□ 2.12
CCM2L-201ENST00000262659 IFT172Q9UG01 1749 aa28.26■■■□□ 2.12
CCM2L-201ENST00000262659 TET3O43151 1660 aa28.26■■■□□ 2.11
CCM2L-201ENST00000262659 SETBP1Q9Y6X0 1596 aa28.26■■■□□ 2.11
CCM2L-201ENST00000262659 A0A1W2PP64 1363 aa28.26■■■□□ 2.11
CCM2L-201ENST00000262659 MUM1L1Q5H9M0 696 aa28.26■■■□□ 2.11
CCM2L-201ENST00000262659 YY1AP1Q9H869 796 aa28.26■■■□□ 2.11
CCM2L-201ENST00000262659 MTMR6Q9Y217 621 aa28.26■■■□□ 2.11
CCM2L-201ENST00000262659 EVC2Q86UK5 1308 aa28.26■■■□□ 2.11
CCM2L-201ENST00000262659 TRIM66O15016 1216 aa28.26■■■□□ 2.11
CCM2L-201ENST00000262659 AK2P54819 239 aa28.25■■■□□ 2.11
CCM2L-201ENST00000262659 RNF20Q5VTR2 975 aa28.25■■■□□ 2.11
CCM2L-201ENST00000262659 LRRN4CLQ8ND94 238 aa28.25■■■□□ 2.11
CCM2L-201ENST00000262659 SSH2Q76I76 1423 aa28.25■■■□□ 2.11
CCM2L-201ENST00000262659 SKILP12757 684 aa28.25■■■□□ 2.11
CCM2L-201ENST00000262659 TNMDQ9H2S6 317 aa28.25■■■□□ 2.11
CCM2L-201ENST00000262659 POLKQ9UBT6 870 aa28.25■■■□□ 2.11
CCM2L-201ENST00000262659 HTATSF1O43719 755 aaKnown RBP28.24■■■□□ 2.11
CCM2L-201ENST00000262659 DHX16O60231 1041 aaKnown RBP28.24■■■□□ 2.11
CCM2L-201ENST00000262659 HSPA4P34932 840 aa28.24■■■□□ 2.11
CCM2L-201ENST00000262659 RUFY3Q7L099 469 aa28.24■■■□□ 2.11
CCM2L-201ENST00000262659 C10orf67Q8IYJ2 551 aa28.24■■■□□ 2.11
CCM2L-201ENST00000262659 LCMT1Q9UIC8 334 aa28.24■■■□□ 2.11
CCM2L-201ENST00000262659 ABCC1P33527 1531 aa28.24■■■□□ 2.11
CCM2L-201ENST00000262659 ERCC6L2Q5T890 1561 aa28.24■■■□□ 2.11
CCM2L-201ENST00000262659 FYB1O15117 783 aa28.24■■■□□ 2.11
CCM2L-201ENST00000262659 HMOX1P09601 288 aa28.24■■■□□ 2.11
CCM2L-201ENST00000262659 TEX35Q5T0J7 233 aa28.24■■■□□ 2.11
CCM2L-201ENST00000262659 TTC6Q86TZ1 520 aa28.24■■■□□ 2.11
CCM2L-201ENST00000262659 TXLNBQ8N3L3 684 aa28.24■■■□□ 2.11
CCM2L-201ENST00000262659 AFAP1Q8N556 730 aa28.23■■■□□ 2.11
CCM2L-201ENST00000262659 ST5P78524 1137 aa28.23■■■□□ 2.11
CCM2L-201ENST00000262659 TTC14Q96N46 770 aa28.23■■■□□ 2.11
CCM2L-201ENST00000262659 GYS2P54840 703 aa28.22■■■□□ 2.11
CCM2L-201ENST00000262659 GEMIN8Q9NWZ8 242 aaKnown RBP28.22■■■□□ 2.11
CCM2L-201ENST00000262659 EXOC6BQ9Y2D4 811 aa28.22■■■□□ 2.11
CCM2L-201ENST00000262659 PNPLA6Q8IY17 1366 aa28.22■■■□□ 2.11
CCM2L-201ENST00000262659 MYO1CO00159 1063 aa28.22■■■□□ 2.11
CCM2L-201ENST00000262659 GJB2P29033 226 aa28.22■■■□□ 2.11
CCM2L-201ENST00000262659 UNC5CLQ8IV45 518 aa28.22■■■□□ 2.11
CCM2L-201ENST00000262659 DACT1Q9NYF0 836 aa28.22■■■□□ 2.11
CCM2L-201ENST00000262659 LIMCH1Q9UPQ0 1083 aa28.22■■■□□ 2.11
CCM2L-201ENST00000262659 SALL3Q9BXA9 1300 aa28.22■■■□□ 2.11
CCM2L-201ENST00000262659 TULP4Q9NRJ4 1543 aa28.21■■■□□ 2.11
CCM2L-201ENST00000262659 ZNF165P49910 485 aa28.21■■■□□ 2.11
CCM2L-201ENST00000262659 DNAJC25Q9H1X3 360 aa28.21■■■□□ 2.11
CCM2L-201ENST00000262659 C14orf93Q9H972 538 aaKnown RBP28.21■■■□□ 2.11
CCM2L-201ENST00000262659 KIF1BO60333 1816 aa28.21■■■□□ 2.11
CCM2L-201ENST00000262659 MROH2AA6NES4 1674 aa28.21■■■□□ 2.11
CCM2L-201ENST00000262659 LARGE1O95461 756 aa28.21■■■□□ 2.11
CCM2L-201ENST00000262659 CCAR2Q8N163 923 aaKnown RBP28.21■■■□□ 2.11
CCM2L-201ENST00000262659 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.21■■■□□ 2.11
CCM2L-201ENST00000262659 SMARCE1Q969G3 411 aa28.21■■■□□ 2.11
CCM2L-201ENST00000262659 LRRFIP2Q9Y608 721 aaKnown RBP28.2■■■□□ 2.11
CCM2L-201ENST00000262659 VPS37CA5D8V6 355 aaPredicted RBP28.2■■■□□ 2.1
CCM2L-201ENST00000262659 CDC25BP30305 580 aa28.2■■■□□ 2.1
CCM2L-201ENST00000262659 MLECQ14165 292 aa28.2■■■□□ 2.1
CCM2L-201ENST00000262659 SOX12O15370 315 aa28.19■■■□□ 2.1
CCM2L-201ENST00000262659 HMMRO75330 724 aa28.19■■■□□ 2.1
CCM2L-201ENST00000262659 VWDEQ8N2E2 1590 aa28.19■■■□□ 2.1
CCM2L-201ENST00000262659 PUS7Q96PZ0 661 aaKnown RBP28.18■■■□□ 2.1
CCM2L-201ENST00000262659 ADGRB1O14514 1584 aa28.18■■■□□ 2.1
CCM2L-201ENST00000262659 NEMFO60524 1076 aa28.18■■■□□ 2.1
CCM2L-201ENST00000262659 ZRANB2O95218 330 aaKnown RBP eCLIP28.18■■■□□ 2.1
CCM2L-201ENST00000262659 CHGAP10645 457 aaKnown RBP28.18■■■□□ 2.1
CCM2L-201ENST00000262659 CCZ1BP86790 482 aa28.18■■■□□ 2.1
CCM2L-201ENST00000262659 CCZ1P86791 482 aaPredicted RBP28.18■■■□□ 2.1
CCM2L-201ENST00000262659 CCDC83Q8IWF9 413 aa28.18■■■□□ 2.1
CCM2L-201ENST00000262659 TUBGCP6Q96RT7 1819 aa28.17■■■□□ 2.1
CCM2L-201ENST00000262659 TPM4P67936 248 aa28.17■■■□□ 2.1
CCM2L-201ENST00000262659 ARHGAP29Q52LW3 1261 aa28.17■■■□□ 2.1
CCM2L-201ENST00000262659 CCDC191Q8NCU4 936 aa28.17■■■□□ 2.1
CCM2L-201ENST00000262659 SNX14Q9Y5W7 946 aa28.17■■■□□ 2.1
CCM2L-201ENST00000262659 CHD1O14646 1710 aa28.17■■■□□ 2.1
CCM2L-201ENST00000262659 CCDC69A6NI79 296 aa28.17■■■□□ 2.1
CCM2L-201ENST00000262659 GTF2A1P52655 376 aaPredicted RBP28.17■■■□□ 2.1
CCM2L-201ENST00000262659 L2HGDHQ9H9P8 463 aa28.17■■■□□ 2.1
CCM2L-201ENST00000262659 CASQ1P31415 396 aa28.16■■■□□ 2.1
CCM2L-201ENST00000262659 ZSCAN26Q16670 478 aa28.16■■■□□ 2.1
CCM2L-201ENST00000262659 CPA1P15085 419 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms