RNA–Protein interactions for RNA: ENST00000261647.9

TTC19-201, Transcript of tetratricopeptide repeat domain 19, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC19, Length 3,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-201ENST00000261647 PRIMPOLQ96LW4 560 aa22.6■■□□□ 1.21
TTC19-201ENST00000261647 STAP2Q9UGK3 403 aa22.6■■□□□ 1.21
TTC19-201ENST00000261647 RTF1Q92541 710 aaKnown RBP22.6■■□□□ 1.21
TTC19-201ENST00000261647 STK31Q9BXU1 1019 aa22.59■■□□□ 1.21
TTC19-201ENST00000261647 KIF3AQ9Y496 699 aa22.59■■□□□ 1.21
TTC19-201ENST00000261647 UBE2HP62256 183 aa22.58■■□□□ 1.21
TTC19-201ENST00000261647 HMGN5P82970 282 aaKnown RBP22.58■■□□□ 1.21
TTC19-201ENST00000261647 CWC27Q6UX04 472 aaKnown RBP22.58■■□□□ 1.21
TTC19-201ENST00000261647 CCDC83Q8IWF9 413 aa22.58■■□□□ 1.21
TTC19-201ENST00000261647 TMEM87AQ8NBN3 555 aa22.58■■□□□ 1.21
TTC19-201ENST00000261647 TTC14Q96N46 770 aa22.58■■□□□ 1.21
TTC19-201ENST00000261647 F13A1P00488 732 aa22.57■■□□□ 1.2
TTC19-201ENST00000261647 FUCA2Q9BTY2 467 aa22.57■■□□□ 1.2
TTC19-201ENST00000261647 USP44Q9H0E7 712 aa22.57■■□□□ 1.2
TTC19-201ENST00000261647 SPTLC3Q9NUV7 552 aa22.57■■□□□ 1.2
TTC19-201ENST00000261647 SURF6O75683 361 aaKnown RBP22.57■■□□□ 1.2
TTC19-201ENST00000261647 GNAI3P08754 354 aa22.57■■□□□ 1.2
TTC19-201ENST00000261647 SMC3Q9UQE7 1217 aa22.57■■□□□ 1.2
TTC19-201ENST00000261647 MLECQ14165 292 aa22.56■■□□□ 1.2
TTC19-201ENST00000261647 BCL11BQ9C0K0 894 aaPredicted RBP22.56■■□□□ 1.2
TTC19-201ENST00000261647 RIOK3O14730 519 aaKnown RBP22.56■■□□□ 1.2
TTC19-201ENST00000261647 TTC21BQ7Z4L5 1316 aa22.55■■□□□ 1.2
TTC19-201ENST00000261647 GTF2F1P35269 517 aaKnown RBP eCLIP22.55■■□□□ 1.2
TTC19-201ENST00000261647 FAM173BQ6P4H8 233 aa22.55■■□□□ 1.2
TTC19-201ENST00000261647 SGSM2O43147 1006 aa22.55■■□□□ 1.2
TTC19-201ENST00000261647 COL9A3Q14050 684 aaPredicted RBP22.55■■□□□ 1.2
TTC19-201ENST00000261647 KIAA1524Q8TCG1 905 aa22.55■■□□□ 1.2
TTC19-201ENST00000261647 LSG1Q9H089 658 aaKnown RBP22.55■■□□□ 1.2
TTC19-201ENST00000261647 CASTP20810 708 aaKnown RBP22.55■■□□□ 1.2
TTC19-201ENST00000261647 PI4K2BQ8TCG2 481 aa22.55■■□□□ 1.2
TTC19-201ENST00000261647 CAMK4Q16566 473 aa22.54■■□□□ 1.2
TTC19-201ENST00000261647 ADCK5Q3MIX3 580 aa22.54■■□□□ 1.2
TTC19-201ENST00000261647 LIMCH1Q9UPQ0 1083 aa22.54■■□□□ 1.2
TTC19-201ENST00000261647 GJB2P29033 226 aa22.54■■□□□ 1.2
TTC19-201ENST00000261647 PPP1R42Q7Z4L9 355 aa22.54■■□□□ 1.2
TTC19-201ENST00000261647 PHAXQ9H814 394 aaKnown RBP22.54■■□□□ 1.2
TTC19-201ENST00000261647 RAD50Q92878 1312 aa22.53■■□□□ 1.2
TTC19-201ENST00000261647 NECAB1Q8N987 351 aa22.53■■□□□ 1.2
TTC19-201ENST00000261647 SSH2Q76I76 1423 aa22.53■■□□□ 1.2
TTC19-201ENST00000261647 RIMS1Q86UR5 1692 aaKnown RBP22.53■■□□□ 1.2
TTC19-201ENST00000261647 VPS37CA5D8V6 355 aaPredicted RBP22.53■■□□□ 1.2
TTC19-201ENST00000261647 IL17RAQ96F46 866 aa22.53■■□□□ 1.2
TTC19-201ENST00000261647 TUBGCP6Q96RT7 1819 aa22.53■■□□□ 1.2
TTC19-201ENST00000261647 ACEP12821 1306 aa22.52■■□□□ 1.2
TTC19-201ENST00000261647 UBTFL1P0CB47 393 aaPredicted RBP22.52■■□□□ 1.2
TTC19-201ENST00000261647 U2AF2P26368 475 aaKnown RBP eCLIP22.52■■□□□ 1.29e-7■■■■□ 22.5
TTC19-201ENST00000261647 FERMT3Q86UX7 667 aa22.52■■□□□ 1.19
TTC19-201ENST00000261647 MTMR6Q9Y217 621 aa22.52■■□□□ 1.19
TTC19-201ENST00000261647 PTH1RQ03431 593 aa22.51■■□□□ 1.19
TTC19-201ENST00000261647 PTGS1P23219 599 aa22.51■■□□□ 1.19
TTC19-201ENST00000261647 RHPN1Q8TCX5 695 aa22.51■■□□□ 1.19
TTC19-201ENST00000261647 SOS1Q07889 1333 aaPredicted RBP22.5■■□□□ 1.19
TTC19-201ENST00000261647 ST3GAL1Q11201 340 aa22.5■■□□□ 1.19
TTC19-201ENST00000261647 DLC1Q96QB1 1528 aa22.5■■□□□ 1.19
TTC19-201ENST00000261647 LETM1O95202 739 aaPredicted RBP22.49■■□□□ 1.19
TTC19-201ENST00000261647 CCDC30Q5VVM6 783 aa22.49■■□□□ 1.19
TTC19-201ENST00000261647 PDCL2Q8N4E4 241 aa22.49■■□□□ 1.19
TTC19-201ENST00000261647 HYPKQ9NX55 129 aa22.49■■□□□ 1.19
TTC19-201ENST00000261647 RIMBP3CA6NJZ7 1639 aa22.49■■□□□ 1.19
TTC19-201ENST00000261647 RIMBP3BA6NNM3 1639 aa22.49■■□□□ 1.19
TTC19-201ENST00000261647 RIMBP3Q9UFD9 1639 aa22.49■■□□□ 1.19
TTC19-201ENST00000261647 LRMPQ12912 555 aa22.49■■□□□ 1.19
TTC19-201ENST00000261647 LUZP1Q86V48 1076 aa22.49■■□□□ 1.19
TTC19-201ENST00000261647 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.49■■□□□ 1.19
TTC19-201ENST00000261647 A2ML1A8K2U0 1454 aa22.49■■□□□ 1.19
TTC19-201ENST00000261647 UTP14CQ5TAP6 766 aaKnown RBP22.49■■□□□ 1.19
TTC19-201ENST00000261647 EYA1Q99502 592 aa22.49■■□□□ 1.19
TTC19-201ENST00000261647 SRGAP3O43295 1099 aa22.48■■□□□ 1.19
TTC19-201ENST00000261647 PRPF40BQ6NWY9 871 aaKnown RBP22.48■■□□□ 1.19
TTC19-201ENST00000261647 CKAP2LQ8IYA6 745 aa22.48■■□□□ 1.19
TTC19-201ENST00000261647 JAKMIP1Q96N16 626 aaKnown RBP22.48■■□□□ 1.19
TTC19-201ENST00000261647 NBPF7P0C2Y1 421 aaPredicted RBP22.48■■□□□ 1.19
TTC19-201ENST00000261647 SSH3Q8TE77 659 aa22.48■■□□□ 1.19
TTC19-201ENST00000261647 NRBP1Q9UHY1 535 aa22.48■■□□□ 1.19
TTC19-201ENST00000261647 LIG1P18858 919 aa22.47■■□□□ 1.19
TTC19-201ENST00000261647 NAA30Q147X3 362 aaPredicted RBP22.47■■□□□ 1.19
TTC19-201ENST00000261647 TCEANC2Q96MN5 208 aa22.47■■□□□ 1.19
TTC19-201ENST00000261647 PEAK1Q9H792 1746 aa22.46■■□□□ 1.19
TTC19-201ENST00000261647 ME3Q16798 604 aa22.46■■□□□ 1.19
TTC19-201ENST00000261647 TTC6Q86TZ1 520 aa22.46■■□□□ 1.19
TTC19-201ENST00000261647 PDRG1Q9NUG6 133 aa22.45■■□□□ 1.18
TTC19-201ENST00000261647 C3P01024 1663 aa22.45■■□□□ 1.18
TTC19-201ENST00000261647 EIF2S2P20042 333 aaKnown RBP22.45■■□□□ 1.18
TTC19-201ENST00000261647 ANXA1P04083 346 aa22.44■■□□□ 1.18
TTC19-201ENST00000261647 CCDC186Q7Z3E2 898 aa22.44■■□□□ 1.18
TTC19-201ENST00000261647 CNTROBQ8N137 903 aa22.44■■□□□ 1.18
TTC19-201ENST00000261647 IL17REQ8NFR9 667 aa22.44■■□□□ 1.18
TTC19-201ENST00000261647 TFIP11Q9UBB9 837 aaKnown RBP22.44■■□□□ 1.18
TTC19-201ENST00000261647 NRKQ7Z2Y5 1582 aa22.43■■□□□ 1.18
TTC19-201ENST00000261647 MON2Q7Z3U7 1717 aa22.43■■□□□ 1.18
TTC19-201ENST00000261647 C16orf45Q96MC5 204 aaPredicted RBP22.43■■□□□ 1.18
TTC19-201ENST00000261647 NEO1Q92859 1461 aa22.43■■□□□ 1.18
TTC19-201ENST00000261647 CDC37L1Q7L3B6 337 aa22.43■■□□□ 1.18
TTC19-201ENST00000261647 ATP6V1DQ9Y5K8 247 aa22.43■■□□□ 1.18
TTC19-201ENST00000261647 MRVI1Q9Y6F6 885 aa22.43■■□□□ 1.18
TTC19-201ENST00000261647 CCDC192P0DO97 292 aa22.42■■□□□ 1.18
TTC19-201ENST00000261647 CHAF1AQ13111 956 aaPredicted RBP22.42■■□□□ 1.18
TTC19-201ENST00000261647 AOX1Q06278 1338 aa22.42■■□□□ 1.18
TTC19-201ENST00000261647 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.41■■□□□ 1.18
TTC19-201ENST00000261647 LTV1Q96GA3 475 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms