RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 KLHL23Q8NBE8 558 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 SMARCC1Q92922 1105 aaPredicted RBP7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 MYBBP1AQ9BQG0 1328 aaKnown RBP7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 MAGEA9P43362 315 aa7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 C22orf23Q9BZE7 217 aa7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 TRIM5Q9C035 493 aa7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 SDCCAG8Q86SQ7 713 aaPredicted RBP7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 SAMD9Q5K651 1589 aa7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 TCOF1Q13428 1488 aaKnown RBP7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 PFDN1O60925 122 aa7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 ZNF280DQ6N043 979 aa7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 USP6NLQ92738 828 aa7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 DDX27Q96GQ7 796 aaKnown RBP7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 TRIML1Q8N9V2 468 aa7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 N4BP2L2Q92802 583 aaPredicted RBP7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 FBXW7Q969H0 707 aa7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 AKAP17AQ02040 695 aaKnown RBP7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 NAA16Q6N069 864 aaPredicted RBP7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 EFCAB13Q8IY85 973 aa7.85□□□□□ -1.15
PDGFRA-201ENST00000257290 UBA5Q9GZZ9 404 aa7.84□□□□□ -1.15
PDGFRA-201ENST00000257290 ETAA1Q9NY74 926 aa7.84□□□□□ -1.15
PDGFRA-201ENST00000257290 ODF2LQ9ULJ1 636 aa7.84□□□□□ -1.15
PDGFRA-201ENST00000257290 DYTNA2CJ06 578 aa7.84□□□□□ -1.15
PDGFRA-201ENST00000257290 CREB3O43889 395 aa7.84□□□□□ -1.15
PDGFRA-201ENST00000257290 INPP5BP32019 993 aa7.84□□□□□ -1.15
PDGFRA-201ENST00000257290 FOSBP53539 338 aa7.84□□□□□ -1.15
PDGFRA-201ENST00000257290 SMC1AQ14683 1233 aaKnown RBP7.84□□□□□ -1.15
PDGFRA-201ENST00000257290 NLRP13Q86W25 1043 aa7.84□□□□□ -1.15
PDGFRA-201ENST00000257290 EVC2Q86UK5 1308 aa7.84□□□□□ -1.15
PDGFRA-201ENST00000257290 SPATA24Q86W54 205 aa7.84□□□□□ -1.15
PDGFRA-201ENST00000257290 CCDC7Q96M83 1385 aa7.84□□□□□ -1.15
PDGFRA-201ENST00000257290 FYB1O15117 783 aa7.84□□□□□ -1.15
PDGFRA-201ENST00000257290 FMNL2Q96PY5 1086 aa7.84□□□□□ -1.15
PDGFRA-201ENST00000257290 CNTLNQ9NXG0 1405 aa7.84□□□□□ -1.16
PDGFRA-201ENST00000257290 ZNF365Q70YC5 407 aa7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 GET4Q7L5D6 327 aaPredicted RBP7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 JMYQ8N9B5 988 aa7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 TAOK3Q9H2K8 898 aa7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 ADGRL1O94910 1474 aa7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 GPATCH8Q9UKJ3 1502 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 POTEB2H3BUK9 544 aa7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 MICAL1Q8TDZ2 1067 aa7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 SCLT1Q96NL6 688 aa7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 SEPT11Q9NVA2 429 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 PSEN1P49768 467 aa7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 CLASRPQ8N2M8 674 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 C16orf45Q96MC5 204 aaPredicted RBP7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 CRBNQ96SW2 442 aa7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 CD109Q6YHK3 1445 aa7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 STK10O94804 968 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 NUTM2DQ5VT03 806 aaPredicted RBP7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 GTF3C6Q969F1 213 aa7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 UBAP1Q9NZ09 502 aa7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 CLIP2Q9UDT6 1046 aa7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 ATP10BO94823 1461 aa7.83□□□□□ -1.16
PDGFRA-201ENST00000257290 ZFXP17010 805 aaPredicted RBP7.82□□□□□ -1.16
PDGFRA-201ENST00000257290 UVSSAQ2YD98 709 aa7.82□□□□□ -1.16
PDGFRA-201ENST00000257290 SYT10Q6XYQ8 523 aa7.82□□□□□ -1.16
PDGFRA-201ENST00000257290 PAIP2BQ9ULR5 123 aaKnown RBP7.82□□□□□ -1.16
PDGFRA-201ENST00000257290 ACBD5Q5T8D3 534 aaPredicted RBP7.82□□□□□ -1.16
PDGFRA-201ENST00000257290 TRAK1Q9UPV9 953 aa7.82□□□□□ -1.16
PDGFRA-201ENST00000257290 CCDC80Q76M96 950 aa7.82□□□□□ -1.16
PDGFRA-201ENST00000257290 DTNBP1Q96EV8 351 aa7.82□□□□□ -1.16
PDGFRA-201ENST00000257290 ARFGAP3Q9NP61 516 aa7.82□□□□□ -1.16
PDGFRA-201ENST00000257290 A0A087WUV0 522 aaPredicted RBP7.82□□□□□ -1.16
PDGFRA-201ENST00000257290 C17orf50Q8WW18 174 aa7.82□□□□□ -1.16
PDGFRA-201ENST00000257290 DISP1Q96F81 1524 aa7.82□□□□□ -1.16
PDGFRA-201ENST00000257290 ZFYP08048 801 aaPredicted RBP7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 NEUROD2Q15784 382 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 LMNTD2Q8IXW0 634 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 TEX11Q8IYF3 940 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 USP25Q9UHP3 1055 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 SLU7O95391 586 aaKnown RBP7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 FAM160A1Q05DH4 1040 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 PANK3Q9H999 370 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 FAM177BA6PVY3 158 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 KLHL40Q2TBA0 621 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 TSHZ1Q6ZSZ6 1077 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 MPP4Q96JB8 637 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 ATG3Q9NT62 314 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 NCOA1Q15788 1441 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 RIOK3O14730 519 aaKnown RBP7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 ERC2O15083 957 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 VIMP08670 466 aaKnown RBP7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 NEK11Q8NG66 645 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 EXOC1Q9NV70 894 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 GNL3LQ9NVN8 582 aaKnown RBP7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 TRAIPQ9BWF2 469 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 ZNF280CQ8ND82 737 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 ANKRD24Q8TF21 1146 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 PPP1R9BQ96SB3 815 aa7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 PRKRIP1Q9H875 184 aaPredicted RBP7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 UTP6Q9NYH9 597 aaKnown RBP7.81□□□□□ -1.16
PDGFRA-201ENST00000257290 NEMFO60524 1076 aa7.8□□□□□ -1.16
PDGFRA-201ENST00000257290 SLC8A1P32418 973 aa7.8□□□□□ -1.16
PDGFRA-201ENST00000257290 HHATQ5VTY9 493 aa7.8□□□□□ -1.16
PDGFRA-201ENST00000257290 MSL1Q68DK7 614 aa7.8□□□□□ -1.16
PDGFRA-201ENST00000257290 MYLK4Q86YV6 388 aaPredicted RBP7.8□□□□□ -1.16
PDGFRA-201ENST00000257290 PDCD7Q8N8D1 485 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms