RNA–Protein interactions for RNA: ENST00000256996.8

DDB2-201, Transcript of damage specific DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-201ENST00000256996 SHANK3Q9BYB0 1731 aa15.58■□□□□ 0.08
DDB2-201ENST00000256996 DDB1Q16531 1140 aa15.58■□□□□ 0.08
DDB2-201ENST00000256996 STK31Q9BXU1 1019 aa15.58■□□□□ 0.08
DDB2-201ENST00000256996 VIRMAQ69YN4 1812 aaKnown RBP15.58■□□□□ 0.08
DDB2-201ENST00000256996 SIPA1L3O60292 1781 aaPredicted RBP15.58■□□□□ 0.08
DDB2-201ENST00000256996 HDGFL1Q5TGJ6 251 aa15.57■□□□□ 0.08
DDB2-201ENST00000256996 TTC5Q8N0Z6 440 aa15.57■□□□□ 0.08
DDB2-201ENST00000256996 FRAT2O75474 233 aaPredicted RBP15.56■□□□□ 0.08
DDB2-201ENST00000256996 BECN1Q14457 450 aa15.56■□□□□ 0.08
DDB2-201ENST00000256996 MVPQ14764 893 aaKnown RBP15.56■□□□□ 0.08
DDB2-201ENST00000256996 FAM98CQ17RN3 349 aaKnown RBP15.56■□□□□ 0.08
DDB2-201ENST00000256996 NECTIN2Q92692 538 aa15.56■□□□□ 0.08
DDB2-201ENST00000256996 ZNF496Q96IT1 587 aaPredicted RBP15.56■□□□□ 0.08
DDB2-201ENST00000256996 API5Q9BZZ5 524 aaKnown RBP15.56■□□□□ 0.08
DDB2-201ENST00000256996 PTPRCP08575 1304 aa15.55■□□□□ 0.08
DDB2-201ENST00000256996 AFF2P51816 1311 aa15.55■□□□□ 0.08
DDB2-201ENST00000256996 EIF2S2P20042 333 aaKnown RBP15.54■□□□□ 0.08
DDB2-201ENST00000256996 CLCN1P35523 988 aa15.54■□□□□ 0.08
DDB2-201ENST00000256996 ZNF772Q68DY9 489 aaPredicted RBP15.54■□□□□ 0.08
DDB2-201ENST00000256996 ABCC4O15439 1325 aa15.54■□□□□ 0.08
DDB2-201ENST00000256996 PRAMEF22A3QJZ6 481 aa15.54■□□□□ 0.08
DDB2-201ENST00000256996 AAMPQ13685 434 aa15.54■□□□□ 0.08
DDB2-201ENST00000256996 G2E3Q7L622 706 aa15.54■□□□□ 0.08
DDB2-201ENST00000256996 TMEM57Q8N5G2 664 aa15.54■□□□□ 0.08
DDB2-201ENST00000256996 FMNL2Q96PY5 1086 aa15.54■□□□□ 0.08
DDB2-201ENST00000256996 TMOD3Q9NYL9 352 aa15.54■□□□□ 0.08
DDB2-201ENST00000256996 VSIG10Q8N0Z9 540 aa15.53■□□□□ 0.08
DDB2-201ENST00000256996 MARCH10Q8NA82 808 aaPredicted RBP15.53■□□□□ 0.08
DDB2-201ENST00000256996 ZMYND15Q9H091 742 aa15.53■□□□□ 0.08
DDB2-201ENST00000256996 ITPRIPQ8IWB1 547 aa15.52■□□□□ 0.08
DDB2-201ENST00000256996 PIGBQ92521 554 aa15.52■□□□□ 0.08
DDB2-201ENST00000256996 GJD4Q96KN9 370 aaPredicted RBP15.52■□□□□ 0.08
DDB2-201ENST00000256996 DDX19BQ9UMR2 479 aa15.52■□□□□ 0.08
DDB2-201ENST00000256996 WNK3Q9BYP7 1800 aa15.52■□□□□ 0.08
DDB2-201ENST00000256996 SNRPA1P09661 255 aaKnown RBP15.52■□□□□ 0.07
DDB2-201ENST00000256996 FLIIQ13045 1269 aa15.52■□□□□ 0.07
DDB2-201ENST00000256996 CHPF2Q9P2E5 772 aa15.52■□□□□ 0.07
DDB2-201ENST00000256996 DBF4Q9UBU7 674 aaPredicted RBP15.52■□□□□ 0.07
DDB2-201ENST00000256996 ISY1Q9ULR0 285 aaKnown RBP15.52■□□□□ 0.07
DDB2-201ENST00000256996 RGS12O14924 1447 aa15.51■□□□□ 0.07
DDB2-201ENST00000256996 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.51■□□□□ 0.07
DDB2-201ENST00000256996 SEC24BO95487 1268 aa15.5■□□□□ 0.07
DDB2-201ENST00000256996 TRPC5Q9UL62 973 aaPredicted RBP15.5■□□□□ 0.07
DDB2-201ENST00000256996 BCL9O00512 1426 aa15.5■□□□□ 0.07
DDB2-201ENST00000256996 TOGARAM1Q9Y4F4 1720 aa15.5■□□□□ 0.07
DDB2-201ENST00000256996 ATRNO75882 1429 aa15.49■□□□□ 0.07
DDB2-201ENST00000256996 RXRBP28702 533 aa15.49■□□□□ 0.07
DDB2-201ENST00000256996 PRIM1P49642 420 aaKnown RBP15.49■□□□□ 0.07
DDB2-201ENST00000256996 INTS3Q68E01 1043 aaKnown RBP15.49■□□□□ 0.07
DDB2-201ENST00000256996 PHAXQ9H814 394 aaKnown RBP15.49■□□□□ 0.07
DDB2-201ENST00000256996 ONECUT3O60422 494 aaPredicted RBP15.48■□□□□ 0.07
DDB2-201ENST00000256996 PTCD1O75127 700 aaKnown RBP15.48■□□□□ 0.07
DDB2-201ENST00000256996 FKBP5Q13451 457 aaPredicted RBP15.48■□□□□ 0.07
DDB2-201ENST00000256996 NAP1L5Q96NT1 182 aaPredicted RBP15.48■□□□□ 0.07
DDB2-201ENST00000256996 ASAP1Q9ULH1 1129 aa15.48■□□□□ 0.07
DDB2-201ENST00000256996 USP16Q9Y5T5 823 aa15.48■□□□□ 0.07
DDB2-201ENST00000256996 ZBTB7BO15156 539 aaPredicted RBP15.48■□□□□ 0.07
DDB2-201ENST00000256996 PDIA6Q15084 440 aa15.48■□□□□ 0.07
DDB2-201ENST00000256996 SYTL4Q96C24 671 aaPredicted RBP15.48■□□□□ 0.07
DDB2-201ENST00000256996 ATG3Q9NT62 314 aa15.48■□□□□ 0.07
DDB2-201ENST00000256996 ZBTB40Q9NUA8 1239 aa15.48■□□□□ 0.07
DDB2-201ENST00000256996 A0A0G2JS52 829 aa15.47■□□□□ 0.07
DDB2-201ENST00000256996 F6X3S4 739 aa15.47■□□□□ 0.07
DDB2-201ENST00000256996 ANXA1P04083 346 aa15.47■□□□□ 0.07
DDB2-201ENST00000256996 PROSER3Q2NL68 480 aa15.47■□□□□ 0.07
DDB2-201ENST00000256996 QTRT2Q9H974 415 aaKnown RBP15.47■□□□□ 0.07
DDB2-201ENST00000256996 DDX21Q9NR30 783 aaKnown RBP eCLIP15.47■□□□□ 0.07
DDB2-201ENST00000256996 HYPKQ9NX55 129 aa15.47■□□□□ 0.07
DDB2-201ENST00000256996 KCPQ6ZWJ8 1503 aa15.47■□□□□ 0.07
DDB2-201ENST00000256996 SRCAPQ6ZRS2 3230 aa15.47■□□□□ 0.07
DDB2-201ENST00000256996 CHMP4BQ9H444 224 aaKnown RBP15.46■□□□□ 0.07
DDB2-201ENST00000256996 TPM2P07951 284 aa15.46■□□□□ 0.06
DDB2-201ENST00000256996 PCDHB15Q9Y5E8 787 aa15.46■□□□□ 0.06
DDB2-201ENST00000256996 GLI3P10071 1580 aa15.45■□□□□ 0.06
DDB2-201ENST00000256996 PAPPAQ13219 1627 aa15.45■□□□□ 0.06
DDB2-201ENST00000256996 RRAGDQ9NQL2 400 aaPredicted RBP15.45■□□□□ 0.06
DDB2-201ENST00000256996 GOLGA6L3A6NEY3 463 aa15.44■□□□□ 0.06
DDB2-201ENST00000256996 CCT4P50991 539 aaKnown RBP15.44■□□□□ 0.06
DDB2-201ENST00000256996 SLC4A10Q6U841 1118 aa15.44■□□□□ 0.06
DDB2-201ENST00000256996 ACSBG1Q96GR2 724 aa15.44■□□□□ 0.06
DDB2-201ENST00000256996 THSD7AQ9UPZ6 1657 aa15.44■□□□□ 0.06
DDB2-201ENST00000256996 UBR2Q8IWV8 1755 aa15.43■□□□□ 0.06
DDB2-201ENST00000256996 LRP10Q7Z4F1 713 aa15.43■□□□□ 0.06
DDB2-201ENST00000256996 ANTXR1Q9H6X2 564 aa15.43■□□□□ 0.06
DDB2-201ENST00000256996 ERBB4Q15303 1308 aa15.42■□□□□ 0.06
DDB2-201ENST00000256996 PI4KAP2A4QPH2 592 aa15.42■□□□□ 0.06
DDB2-201ENST00000256996 PI4KAP1Q8N8J0 262 aa15.42■□□□□ 0.06
DDB2-201ENST00000256996 TEX13AQ9BXU3 409 aaPredicted RBP15.42■□□□□ 0.06
DDB2-201ENST00000256996 C5P01031 1676 aa15.42■□□□□ 0.06
DDB2-201ENST00000256996 CACNA1FO60840 1977 aa15.42■□□□□ 0.06
DDB2-201ENST00000256996 KCNQ2O43526 872 aa15.42■□□□□ 0.06
DDB2-201ENST00000256996 MYL6BP14649 208 aa15.42■□□□□ 0.06
DDB2-201ENST00000256996 SEPT12Q8IYM1 358 aa15.42■□□□□ 0.06
DDB2-201ENST00000256996 RBM42Q9BTD8 480 aaKnown RBP15.42■□□□□ 0.06
DDB2-201ENST00000256996 DNAAF4Q8WXU2 420 aa15.41■□□□□ 0.06
DDB2-201ENST00000256996 TBC1D32Q96NH3 1257 aa15.41■□□□□ 0.06
DDB2-201ENST00000256996 ITGB4P16144 1822 aa15.41■□□□□ 0.06
DDB2-201ENST00000256996 ADCY9O60503 1353 aa15.4■□□□□ 0.06
DDB2-201ENST00000256996 NBPF26B4DH59 902 aa15.4■□□□□ 0.06
DDB2-201ENST00000256996 NBPF14Q5TI25 921 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms