RNA–Protein interactions for RNA: ENST00000256646.6

NOTCH2-201, Transcript of notch 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH2, Length 11,389 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-201ENST00000256646 TFIP11Q9UBB9 837 aaKnown RBP11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 TCERG1LQ5VWI1 586 aa11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 DPH6Q7L8W6 267 aa11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 FEZ1Q99689 392 aa11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 CRACR2AQ9BSW2 395 aa11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 INCENPQ9NQS7 918 aa11.55□□□□□ -0.56
NOTCH2-201ENST00000256646 SSRP1Q08945 709 aaKnown RBP11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 KIF4BQ2VIQ3 1234 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 TXLNBQ8N3L3 684 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 NOP2P46087 812 aaKnown RBP11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 CUL5Q93034 780 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 RBM27Q9P2N5 1060 aaKnown RBP11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 CFAP65Q6ZU64 1925 aaKnown RBP11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 CADPSQ9ULU8 1353 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 GOLGA8BA8MQT2 603 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 FKBP15Q5T1M5 1219 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 CCDC150Q8NCX0 1101 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 ZNF622Q969S3 477 aaKnown RBP eCLIP11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 ANKRD50Q9ULJ7 1429 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 PPP1R12BO60237 982 aaPredicted RBP11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 VTI1AQ96AJ9 217 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 PAIP2Q9BPZ3 127 aaKnown RBP11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 PRC1O43663 620 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 SYCP3Q8IZU3 236 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 PKNOX2Q96KN3 472 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 SLC12A7Q9Y666 1083 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 CUX1P39880 1505 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 TMEM110-MUSTN1A8MSY1 372 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 HLTFQ14527 1009 aaKnown RBP eCLIP11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 C8orf76Q96K31 380 aa11.54□□□□□ -0.56
NOTCH2-201ENST00000256646 LMAN1P49257 510 aa11.53□□□□□ -0.56
NOTCH2-201ENST00000256646 APBB1IPQ7Z5R6 666 aaPredicted RBP11.53□□□□□ -0.56
NOTCH2-201ENST00000256646 ATP5J2-PTCD1G3V325 749 aa11.53□□□□□ -0.56
NOTCH2-201ENST00000256646 ARL1P40616 181 aaPredicted RBP11.53□□□□□ -0.56
NOTCH2-201ENST00000256646 WASF1Q92558 559 aa11.53□□□□□ -0.56
NOTCH2-201ENST00000256646 UBXN4Q92575 508 aa11.53□□□□□ -0.56
NOTCH2-201ENST00000256646 IFIT3O14879 490 aaKnown RBP11.53□□□□□ -0.56
NOTCH2-201ENST00000256646 FGD6Q6ZV73 1430 aa11.53□□□□□ -0.56
NOTCH2-201ENST00000256646 BICD1Q96G01 975 aa11.53□□□□□ -0.56
NOTCH2-201ENST00000256646 TOP1P11387 765 aaKnown RBP11.53□□□□□ -0.56
NOTCH2-201ENST00000256646 MTIF2P46199 727 aaKnown RBP11.53□□□□□ -0.56
NOTCH2-201ENST00000256646 TRMT112Q9UI30 125 aaKnown RBP11.53□□□□□ -0.56
NOTCH2-201ENST00000256646 ERBINQ96RT1 1412 aa11.53□□□□□ -0.56
NOTCH2-201ENST00000256646 PDCL2Q8N4E4 241 aa11.52□□□□□ -0.56
NOTCH2-201ENST00000256646 HOOK3Q86VS8 718 aa11.52□□□□□ -0.56
NOTCH2-201ENST00000256646 ZBTB3Q9H5J0 574 aa11.52□□□□□ -0.56
NOTCH2-201ENST00000256646 RAPGEF3O95398 923 aa11.52□□□□□ -0.56
NOTCH2-201ENST00000256646 GJC1P36383 396 aa11.52□□□□□ -0.56
NOTCH2-201ENST00000256646 MTERF4Q7Z6M4 381 aaKnown RBP11.52□□□□□ -0.56
NOTCH2-201ENST00000256646 MRPS9P82933 396 aaKnown RBP11.52□□□□□ -0.57
NOTCH2-201ENST00000256646 AKNAD1Q5T1N1 836 aa11.52□□□□□ -0.57
NOTCH2-201ENST00000256646 GPATCH11Q8N954 259 aa11.52□□□□□ -0.57
NOTCH2-201ENST00000256646 C16orf45Q96MC5 204 aaPredicted RBP11.52□□□□□ -0.57
NOTCH2-201ENST00000256646 MYO1BO43795 1136 aa11.52□□□□□ -0.57
NOTCH2-201ENST00000256646 PTPN14Q15678 1187 aa11.52□□□□□ -0.57
NOTCH2-201ENST00000256646 KIF5CO60282 957 aa11.52□□□□□ -0.57
NOTCH2-201ENST00000256646 KIF20AO95235 890 aa11.52□□□□□ -0.57
NOTCH2-201ENST00000256646 IQSEC3Q9UPP2 1182 aaPredicted RBP11.52□□□□□ -0.57
NOTCH2-201ENST00000256646 U3KPZ7 1027 aaPredicted RBP11.52□□□□□ -0.57
NOTCH2-201ENST00000256646 TMC6Q7Z403 805 aa11.52□□□□□ -0.57
NOTCH2-201ENST00000256646 IPO4Q8TEX9 1081 aaKnown RBP11.52□□□□□ -0.57
NOTCH2-201ENST00000256646 CLIP2Q9UDT6 1046 aa11.52□□□□□ -0.57
NOTCH2-201ENST00000256646 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
NOTCH2-201ENST00000256646 GOLGA8AA7E2F4 631 aa11.51□□□□□ -0.57
NOTCH2-201ENST00000256646 TAF7Q15545 349 aaPredicted RBP11.51□□□□□ -0.57
NOTCH2-201ENST00000256646 NSD3Q9BZ95 1437 aa11.51□□□□□ -0.57
NOTCH2-201ENST00000256646 FSIP1Q8NA03 581 aa11.51□□□□□ -0.57
NOTCH2-201ENST00000256646 CNNM3Q8NE01 707 aa11.51□□□□□ -0.57
NOTCH2-201ENST00000256646 SSFA2P28290 1259 aa11.51□□□□□ -0.57
NOTCH2-201ENST00000256646 PNISRQ8TF01 805 aaKnown RBP11.51□□□□□ -0.57
NOTCH2-201ENST00000256646 PPP6R1Q9UPN7 881 aa11.51□□□□□ -0.57
NOTCH2-201ENST00000256646 IFIT5Q13325 482 aaKnown RBP11.51□□□□□ -0.57
NOTCH2-201ENST00000256646 ZNF652Q9Y2D9 606 aa11.51□□□□□ -0.57
NOTCH2-201ENST00000256646 LRRC2Q9BYS8 371 aa11.51□□□□□ -0.57
NOTCH2-201ENST00000256646 MCM4P33991 863 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 CETN2P41208 172 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 MAATS1Q7Z4T9 603 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 FAM212AQ96EL1 285 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 ACSBG1Q96GR2 724 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 GOLIM4O00461 696 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 ZNF213O14771 459 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 SLC5A1P13866 664 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 IDEP14735 1019 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 C20orf194Q5TEA3 1177 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 PLS1Q14651 629 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 TMPOP42166 694 aaKnown RBP11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 STAMBPO95630 424 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 CTCFLQ8NI51 663 aaPredicted RBP11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 ZSCAN31Q96LW9 406 aaPredicted RBP11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 KIF21BO75037 1637 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 CCDC40Q4G0X9 1142 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 OTUD6BQ8N6M0 293 aa11.5□□□□□ -0.57
NOTCH2-201ENST00000256646 MX1P20591 662 aa11.49□□□□□ -0.57
NOTCH2-201ENST00000256646 SFPQP23246 707 aaKnown RBP eCLIP11.49□□□□□ -0.57
NOTCH2-201ENST00000256646 ANKLE2Q86XL3 938 aa11.49□□□□□ -0.57
NOTCH2-201ENST00000256646 SPECC1Q5M775 1068 aa11.49□□□□□ -0.57
NOTCH2-201ENST00000256646 MICU3Q86XE3 530 aa11.49□□□□□ -0.57
NOTCH2-201ENST00000256646 BACH2Q9BYV9 841 aa11.49□□□□□ -0.57
NOTCH2-201ENST00000256646 SHTN1A0MZ66 631 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms