RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 SURF6O75683 361 aaKnown RBP26.67■■□□□ 1.86
CLN6-201ENST00000249806 POLA2Q14181 598 aa26.67■■□□□ 1.86
CLN6-201ENST00000249806 PHKG2P15735 406 aa26.67■■□□□ 1.86
CLN6-201ENST00000249806 DDIT3P35638 169 aa26.67■■□□□ 1.86
CLN6-201ENST00000249806 NFATC2IPQ8NCF5 419 aa26.67■■□□□ 1.86
CLN6-201ENST00000249806 MEGF6O75095 1541 aa26.67■■□□□ 1.86
CLN6-201ENST00000249806 SPATA31A3Q5VYP0 1347 aa26.67■■□□□ 1.86
CLN6-201ENST00000249806 ADAMTS7Q9UKP4 1686 aa26.66■■□□□ 1.86
CLN6-201ENST00000249806 KDM6AO15550 1401 aaPredicted RBP26.66■■□□□ 1.86
CLN6-201ENST00000249806 ZNF790Q6PG37 636 aa26.66■■□□□ 1.86
CLN6-201ENST00000249806 SLC52A2Q9HAB3 445 aa26.66■■□□□ 1.86
CLN6-201ENST00000249806 SPG7Q9UQ90 795 aa26.66■■□□□ 1.86
CLN6-201ENST00000249806 K7ELQ4 463 aaPredicted RBP26.65■■□□□ 1.86
CLN6-201ENST00000249806 CRYBG1Q9Y4K1 1723 aa26.65■■□□□ 1.86
CLN6-201ENST00000249806 KSR2Q6VAB6 950 aa26.65■■□□□ 1.86
CLN6-201ENST00000249806 FOXD4L1Q9NU39 408 aa26.65■■□□□ 1.86
CLN6-201ENST00000249806 ERC2O15083 957 aa26.63■■□□□ 1.85
CLN6-201ENST00000249806 STAP2Q9UGK3 403 aa26.63■■□□□ 1.85
CLN6-201ENST00000249806 AIMP1Q12904 312 aaKnown RBP26.63■■□□□ 1.85
CLN6-201ENST00000249806 CWF19L2Q2TBE0 894 aaKnown RBP26.63■■□□□ 1.85
CLN6-201ENST00000249806 NUTM1Q86Y26 1132 aa26.63■■□□□ 1.85
CLN6-201ENST00000249806 HYPKQ9NX55 129 aa26.63■■□□□ 1.85
CLN6-201ENST00000249806 SCN11AQ9UI33 1791 aa26.62■■□□□ 1.85
CLN6-201ENST00000249806 REC8O95072 547 aa26.62■■□□□ 1.85
CLN6-201ENST00000249806 PDIA6Q15084 440 aa26.62■■□□□ 1.85
CLN6-201ENST00000249806 RILPL2Q969X0 211 aa26.62■■□□□ 1.85
CLN6-201ENST00000249806 TUBGCP6Q96RT7 1819 aa26.62■■□□□ 1.85
CLN6-201ENST00000249806 LMTK3Q96Q04 1460 aa26.62■■□□□ 1.85
CLN6-201ENST00000249806 TRIM6-TRIM34B2RNG4 842 aa26.62■■□□□ 1.85
CLN6-201ENST00000249806 IFNL2Q8IZJ0 200 aa26.62■■□□□ 1.85
CLN6-201ENST00000249806 RAB11FIP3O75154 756 aa26.61■■□□□ 1.85
CLN6-201ENST00000249806 HSP90AA1P07900 732 aaKnown RBP26.61■■□□□ 1.85
CLN6-201ENST00000249806 MCM4P33991 863 aa26.61■■□□□ 1.85
CLN6-201ENST00000249806 RABEP1Q15276 862 aa26.61■■□□□ 1.85
CLN6-201ENST00000249806 BRINP3Q76B58 766 aa26.61■■□□□ 1.85
CLN6-201ENST00000249806 RHPN1Q8TCX5 695 aa26.61■■□□□ 1.85
CLN6-201ENST00000249806 DDX21Q9NR30 783 aaKnown RBP eCLIP26.61■■□□□ 1.85
CLN6-201ENST00000249806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.61■■□□□ 1.85
CLN6-201ENST00000249806 XIRP1Q702N8 1843 aaKnown RBP26.61■■□□□ 1.85
CLN6-201ENST00000249806 CYP27B1O15528 508 aa26.61■■□□□ 1.85
CLN6-201ENST00000249806 C9orf78Q9NZ63 289 aaPredicted RBP26.61■■□□□ 1.85
CLN6-201ENST00000249806 UNC5CLQ8IV45 518 aa26.6■■□□□ 1.85
CLN6-201ENST00000249806 ALDH1L1O75891 902 aa26.58■■□□□ 1.85
CLN6-201ENST00000249806 KIF1BPQ96EK5 621 aa26.57■■□□□ 1.84
CLN6-201ENST00000249806 ZNF496Q96IT1 587 aaPredicted RBP26.57■■□□□ 1.84
CLN6-201ENST00000249806 MYL6BP14649 208 aa26.57■■□□□ 1.84
CLN6-201ENST00000249806 ESYT1Q9BSJ8 1104 aa26.57■■□□□ 1.84
CLN6-201ENST00000249806 CHMLP26374 656 aa26.56■■□□□ 1.84
CLN6-201ENST00000249806 DCAF5Q96JK2 942 aa26.55■■□□□ 1.84
CLN6-201ENST00000249806 C5P01031 1676 aa26.55■■□□□ 1.84
CLN6-201ENST00000249806 CPDO75976 1380 aa26.55■■□□□ 1.84
CLN6-201ENST00000249806 DDX58O95786 925 aaKnown RBP26.54■■□□□ 1.84
CLN6-201ENST00000249806 LINS1Q8NG48 757 aa26.54■■□□□ 1.84
CLN6-201ENST00000249806 MAP4K4O95819 1239 aaPredicted RBP26.54■■□□□ 1.84
CLN6-201ENST00000249806 MTX1Q13505 466 aa26.54■■□□□ 1.84
CLN6-201ENST00000249806 CIZ1Q9ULV3 898 aaPredicted RBP26.54■■□□□ 1.84
CLN6-201ENST00000249806 USP16Q9Y5T5 823 aa26.54■■□□□ 1.84
CLN6-201ENST00000249806 TNPO1Q92973 898 aaKnown RBP26.53■■□□□ 1.84
CLN6-201ENST00000249806 AOX1Q06278 1338 aa26.53■■□□□ 1.84
CLN6-201ENST00000249806 RIC3Q7Z5B4 369 aa26.53■■□□□ 1.84
CLN6-201ENST00000249806 PI4K2BQ8TCG2 481 aa26.53■■□□□ 1.84
CLN6-201ENST00000249806 GRM8O00222 908 aa26.51■■□□□ 1.84
CLN6-201ENST00000249806 PIP4K2AP48426 406 aaPredicted RBP26.51■■□□□ 1.84
CLN6-201ENST00000249806 OS9Q13438 667 aaPredicted RBP26.51■■□□□ 1.84
CLN6-201ENST00000249806 PA2G4Q9UQ80 394 aaKnown RBP26.51■■□□□ 1.84
CLN6-201ENST00000249806 TTC5Q8N0Z6 440 aa26.51■■□□□ 1.83
CLN6-201ENST00000249806 XAGE3Q8WTP9 111 aa26.51■■□□□ 1.83
CLN6-201ENST00000249806 KAZALD1Q96I82 304 aa26.51■■□□□ 1.83
CLN6-201ENST00000249806 SLAIN2Q9P270 581 aa26.51■■□□□ 1.83
CLN6-201ENST00000249806 IGKV5-2P06315 115 aa26.5■■□□□ 1.83
CLN6-201ENST00000249806 RAB3GAP1Q15042 981 aa26.5■■□□□ 1.83
CLN6-201ENST00000249806 HSP90AB4PQ58FF6 505 aa26.5■■□□□ 1.83
CLN6-201ENST00000249806 COPS6Q7L5N1 327 aa26.5■■□□□ 1.83
CLN6-201ENST00000249806 SUCLG2Q96I99 432 aa26.5■■□□□ 1.83
CLN6-201ENST00000249806 PRDM11Q9NQV5 511 aa26.5■■□□□ 1.83
CLN6-201ENST00000249806 ZNF335Q9H4Z2 1342 aaPredicted RBP26.5■■□□□ 1.83
CLN6-201ENST00000249806 ABCC6O95255 1503 aa26.49■■□□□ 1.83
CLN6-201ENST00000249806 ANO2Q9NQ90 1003 aa26.49■■□□□ 1.83
CLN6-201ENST00000249806 STRCQ7RTU9 1775 aa26.49■■□□□ 1.83
CLN6-201ENST00000249806 SNRPA1P09661 255 aaKnown RBP26.49■■□□□ 1.83
CLN6-201ENST00000249806 CABP4P57796 275 aa26.49■■□□□ 1.83
CLN6-201ENST00000249806 IL25Q9H293 177 aa26.49■■□□□ 1.83
CLN6-201ENST00000249806 PKD1L3Q7Z443 1732 aa26.48■■□□□ 1.83
CLN6-201ENST00000249806 ST18O60284 1047 aa26.47■■□□□ 1.83
CLN6-201ENST00000249806 LARP1Q6PKG0 1096 aaKnown RBP26.47■■□□□ 1.83
CLN6-201ENST00000249806 BICC1Q9H694 974 aaKnown RBP26.47■■□□□ 1.83
CLN6-201ENST00000249806 TOM1L2Q6ZVM7 507 aa26.47■■□□□ 1.83
CLN6-201ENST00000249806 UTYO14607 1347 aa26.47■■□□□ 1.83
CLN6-201ENST00000249806 FMNL2Q96PY5 1086 aa26.46■■□□□ 1.83
CLN6-201ENST00000249806 LRP10Q7Z4F1 713 aa26.46■■□□□ 1.83
CLN6-201ENST00000249806 PALD1Q9ULE6 856 aa26.46■■□□□ 1.83
CLN6-201ENST00000249806 HDAC5Q9UQL6 1122 aa26.46■■□□□ 1.83
CLN6-201ENST00000249806 SOS2Q07890 1332 aaPredicted RBP26.46■■□□□ 1.83
CLN6-201ENST00000249806 MRC1P22897 1456 aa26.46■■□□□ 1.83
CLN6-201ENST00000249806 WDR17Q8IZU2 1322 aa26.45■■□□□ 1.82
CLN6-201ENST00000249806 AK9Q5TCS8 1911 aa26.45■■□□□ 1.82
CLN6-201ENST00000249806 KDM4FA0A1W2PPD8 638 aa26.45■■□□□ 1.82
CLN6-201ENST00000249806 TRAK2O60296 914 aa26.45■■□□□ 1.82
CLN6-201ENST00000249806 MYD88Q99836 296 aa26.45■■□□□ 1.82
CLN6-201ENST00000249806 NEURL1BA8MQ27 555 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms