RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 NEUROD2Q15784 382 aa13.96□□□□□ -0.17
PFDN5-201ENST00000243040 COL15A1P39059 1388 aa13.96□□□□□ -0.18
PFDN5-201ENST00000243040 MSH5O43196 834 aa13.95□□□□□ -0.18
PFDN5-201ENST00000243040 STARD3NLO95772 234 aa13.95□□□□□ -0.18
PFDN5-201ENST00000243040 TRAPPC3LQ5T215 181 aa13.95□□□□□ -0.18
PFDN5-201ENST00000243040 SMIM5Q71RC9 77 aa13.95□□□□□ -0.18
PFDN5-201ENST00000243040 ZBTB1Q9Y2K1 713 aa13.95□□□□□ -0.18
PFDN5-201ENST00000243040 KIF13BQ9NQT8 1826 aa13.94□□□□□ -0.18
PFDN5-201ENST00000243040 SNRPA1P09661 255 aaKnown RBP13.94□□□□□ -0.18
PFDN5-201ENST00000243040 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
PFDN5-201ENST00000243040 ARHGEF1Q92888 912 aaKnown RBP13.94□□□□□ -0.18
PFDN5-201ENST00000243040 POLD1P28340 1107 aa13.93□□□□□ -0.18
PFDN5-201ENST00000243040 EIF4A1P60842 406 aaKnown RBP13.93□□□□□ -0.18
PFDN5-201ENST00000243040 MIS18AQ9NYP9 233 aa13.93□□□□□ -0.18
PFDN5-201ENST00000243040 PPP1R1BQ9UD71 204 aaPredicted RBP13.93□□□□□ -0.18
PFDN5-201ENST00000243040 TSPYL4Q9UJ04 414 aa13.93□□□□□ -0.18
PFDN5-201ENST00000243040 USP42Q9H9J4 1324 aaKnown RBP13.92□□□□□ -0.18
PFDN5-201ENST00000243040 CCDC27Q2M243 656 aa13.92□□□□□ -0.18
PFDN5-201ENST00000243040 ARXQ96QS3 562 aa13.92□□□□□ -0.18
PFDN5-201ENST00000243040 NRXN2Q9P2S2 1712 aa13.91□□□□□ -0.18
PFDN5-201ENST00000243040 PRAMEF22A3QJZ6 481 aa13.91□□□□□ -0.18
PFDN5-201ENST00000243040 CCER2I3L3R5 266 aa13.91□□□□□ -0.18
PFDN5-201ENST00000243040 CHL1O00533 1208 aa13.91□□□□□ -0.18
PFDN5-201ENST00000243040 GIGYF1O75420 1035 aaPredicted RBP13.91□□□□□ -0.18
PFDN5-201ENST00000243040 GYS1P13807 737 aa13.91□□□□□ -0.18
PFDN5-201ENST00000243040 RFC4P35249 363 aa13.91□□□□□ -0.18
PFDN5-201ENST00000243040 IL6STP40189 918 aaPredicted RBP13.91□□□□□ -0.18
PFDN5-201ENST00000243040 EIF5P55010 431 aaKnown RBP13.91□□□□□ -0.18
PFDN5-201ENST00000243040 MSL1Q68DK7 614 aa13.91□□□□□ -0.18
PFDN5-201ENST00000243040 USP16Q9Y5T5 823 aa13.91□□□□□ -0.18
PFDN5-201ENST00000243040 CALD1Q05682 793 aaKnown RBP13.9□□□□□ -0.18
PFDN5-201ENST00000243040 CFAP44Q96MT7 982 aa13.9□□□□□ -0.18
PFDN5-201ENST00000243040 AFDNP55196 1824 aaKnown RBP13.9□□□□□ -0.18
PFDN5-201ENST00000243040 A1BGP04217 495 aa13.89□□□□□ -0.19
PFDN5-201ENST00000243040 ZNF853P0CG23 659 aa13.89□□□□□ -0.19
PFDN5-201ENST00000243040 CANXP27824 592 aaKnown RBP13.89□□□□□ -0.19
PFDN5-201ENST00000243040 NLGN1Q8N2Q7 840 aa13.89□□□□□ -0.19
PFDN5-201ENST00000243040 IFT57Q9NWB7 429 aa13.89□□□□□ -0.19
PFDN5-201ENST00000243040 NARFQ9UHQ1 456 aa13.89□□□□□ -0.19
PFDN5-201ENST00000243040 KIAA1551Q9HCM1 1747 aa13.89□□□□□ -0.19
PFDN5-201ENST00000243040 A0A087WZG4 1122 aa13.88□□□□□ -0.19
PFDN5-201ENST00000243040 DIEXFQ68CQ4 756 aaKnown RBP13.88□□□□□ -0.19
PFDN5-201ENST00000243040 FAM9BQ8IZU0 186 aa13.88□□□□□ -0.19
PFDN5-201ENST00000243040 FHDC1Q9C0D6 1143 aaPredicted RBP13.88□□□□□ -0.19
PFDN5-201ENST00000243040 ERBB4Q15303 1308 aa13.88□□□□□ -0.19
PFDN5-201ENST00000243040 GNAI1P63096 354 aa13.87□□□□□ -0.19
PFDN5-201ENST00000243040 NGEFQ8N5V2 710 aa13.87□□□□□ -0.19
PFDN5-201ENST00000243040 SRP68Q9UHB9 627 aaKnown RBP13.87□□□□□ -0.19
PFDN5-201ENST00000243040 NUP98P52948 1817 aa13.86□□□□□ -0.19
PFDN5-201ENST00000243040 NBPF26B4DH59 902 aa13.86□□□□□ -0.19
PFDN5-201ENST00000243040 ZPR1O75312 459 aa13.86□□□□□ -0.19
PFDN5-201ENST00000243040 HOXB7P09629 217 aa13.86□□□□□ -0.19
PFDN5-201ENST00000243040 USPL1Q5W0Q7 1092 aa13.86□□□□□ -0.19
PFDN5-201ENST00000243040 NBPF10Q6P3W6 841 aaKnown RBP13.86□□□□□ -0.19
PFDN5-201ENST00000243040 WWC1Q8IX03 1113 aa13.86□□□□□ -0.19
PFDN5-201ENST00000243040 NBPF15Q8N660 670 aa13.86□□□□□ -0.19
PFDN5-201ENST00000243040 SYT17Q9BSW7 474 aa13.86□□□□□ -0.19
PFDN5-201ENST00000243040 MBIPQ9NS73 344 aa13.86□□□□□ -0.19
PFDN5-201ENST00000243040 IL16Q14005 1332 aa13.86□□□□□ -0.19
PFDN5-201ENST00000243040 BRCA1P38398 1863 aaKnown RBP13.85□□□□□ -0.19
PFDN5-201ENST00000243040 C10orf71Q711Q0 1435 aa13.85□□□□□ -0.19
PFDN5-201ENST00000243040 MMP10P09238 476 aa13.85□□□□□ -0.19
PFDN5-201ENST00000243040 FKBP8Q14318 412 aa13.85□□□□□ -0.19
PFDN5-201ENST00000243040 BCL2L12Q9HB09 334 aa13.85□□□□□ -0.19
PFDN5-201ENST00000243040 LAS1LQ9Y4W2 734 aaKnown RBP13.85□□□□□ -0.19
PFDN5-201ENST00000243040 ANKRD36CQ5JPF3 1778 aa13.85□□□□□ -0.19
PFDN5-201ENST00000243040 RGL2O15211 777 aa13.84□□□□□ -0.19
PFDN5-201ENST00000243040 DLEC1Q9Y238 1755 aa13.83□□□□□ -0.19
PFDN5-201ENST00000243040 CAMTA2O94983 1202 aa13.83□□□□□ -0.2
PFDN5-201ENST00000243040 TM4SF1P30408 202 aa13.83□□□□□ -0.2
PFDN5-201ENST00000243040 PIP4K2AP48426 406 aaPredicted RBP13.83□□□□□ -0.2
PFDN5-201ENST00000243040 NPM2Q86SE8 214 aaKnown RBP13.83□□□□□ -0.2
PFDN5-201ENST00000243040 DZIP3Q86Y13 1208 aaKnown RBP13.83□□□□□ -0.2
PFDN5-201ENST00000243040 ZNF330Q9Y3S2 320 aaPredicted RBP13.83□□□□□ -0.2
PFDN5-201ENST00000243040 CD2APQ9Y5K6 639 aa13.83□□□□□ -0.2
PFDN5-201ENST00000243040 N4BP2Q86UW6 1770 aaPredicted RBP13.83□□□□□ -0.2
PFDN5-201ENST00000243040 DDR1Q08345 913 aa13.82□□□□□ -0.2
PFDN5-201ENST00000243040 KRT24Q2M2I5 525 aa13.82□□□□□ -0.2
PFDN5-201ENST00000243040 WDR63Q8IWG1 891 aa13.82□□□□□ -0.2
PFDN5-201ENST00000243040 TBC1D2BQ9UPU7 963 aa13.82□□□□□ -0.2
PFDN5-201ENST00000243040 PARP3Q9Y6F1 533 aa13.82□□□□□ -0.2
PFDN5-201ENST00000243040 ANKRD31Q8N7Z5 1873 aa13.82□□□□□ -0.2
PFDN5-201ENST00000243040 CACNA1FO60840 1977 aa13.82□□□□□ -0.2
PFDN5-201ENST00000243040 POLRMTO00411 1230 aaKnown RBP13.81□□□□□ -0.2
PFDN5-201ENST00000243040 NFIXQ14938 502 aa13.81□□□□□ -0.2
PFDN5-201ENST00000243040 PDIA6Q15084 440 aa13.81□□□□□ -0.2
PFDN5-201ENST00000243040 LRP10Q7Z4F1 713 aa13.81□□□□□ -0.2
PFDN5-201ENST00000243040 SENP3-EIF4A1A0A087X0R7 540 aa13.8□□□□□ -0.2
PFDN5-201ENST00000243040 EIF2S2P20042 333 aaKnown RBP13.8□□□□□ -0.2
PFDN5-201ENST00000243040 CLEC4GQ6UXB4 293 aa13.8□□□□□ -0.2
PFDN5-201ENST00000243040 KLHL34Q8N239 644 aa13.8□□□□□ -0.2
PFDN5-201ENST00000243040 ZNF521Q96K83 1311 aa13.8□□□□□ -0.2
PFDN5-201ENST00000243040 ARFGEF2Q9Y6D5 1785 aa13.8□□□□□ -0.2
PFDN5-201ENST00000243040 CARMIL3Q8ND23 1372 aa13.8□□□□□ -0.2
PFDN5-201ENST00000243040 PXDNLA1KZ92 1463 aa13.8□□□□□ -0.2
PFDN5-201ENST00000243040 HDGFL1Q5TGJ6 251 aa13.79□□□□□ -0.2
PFDN5-201ENST00000243040 DUSP27Q5VZP5 1158 aa13.79□□□□□ -0.2
PFDN5-201ENST00000243040 MIER1Q8N108 512 aa13.79□□□□□ -0.2
PFDN5-201ENST00000243040 NLGN2Q8NFZ4 835 aa13.79□□□□□ -0.2
PFDN5-201ENST00000243040 ZNF652Q9Y2D9 606 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms