RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 C14orf37Q86TY3 774 aa19.79■□□□□ 0.76
LTBR-201ENST00000228918 ANP32BQ92688 251 aaKnown RBP19.79■□□□□ 0.76
LTBR-201ENST00000228918 IL25Q9H293 177 aa19.79■□□□□ 0.76
LTBR-201ENST00000228918 PHF8Q9UPP1 1060 aa19.79■□□□□ 0.76
LTBR-201ENST00000228918 NUTM1Q86Y26 1132 aa19.78■□□□□ 0.76
LTBR-201ENST00000228918 CHAMP1Q96JM3 812 aa19.78■□□□□ 0.76
LTBR-201ENST00000228918 PHRF1Q9P1Y6 1649 aaKnown RBP19.78■□□□□ 0.76
LTBR-201ENST00000228918 RGPD2P0DJD1 1756 aa19.78■□□□□ 0.76
LTBR-201ENST00000228918 CRYBG1Q9Y4K1 1723 aa19.78■□□□□ 0.76
LTBR-201ENST00000228918 SURF6O75683 361 aaKnown RBP19.78■□□□□ 0.76
LTBR-201ENST00000228918 PI4K2BQ8TCG2 481 aa19.78■□□□□ 0.76
LTBR-201ENST00000228918 CHD2O14647 1828 aaKnown RBP19.78■□□□□ 0.76
LTBR-201ENST00000228918 RHPN1Q8TCX5 695 aa19.77■□□□□ 0.76
LTBR-201ENST00000228918 RBM27Q9P2N5 1060 aaKnown RBP19.77■□□□□ 0.76
LTBR-201ENST00000228918 SETD1BQ9UPS6 1966 aaKnown RBP19.77■□□□□ 0.76
LTBR-201ENST00000228918 EIF2S2P20042 333 aaKnown RBP19.77■□□□□ 0.75
LTBR-201ENST00000228918 NBPF6Q5VWK0 638 aa19.77■□□□□ 0.75
LTBR-201ENST00000228918 NBPF4Q96M43 638 aa19.77■□□□□ 0.75
LTBR-201ENST00000228918 NAP1L5Q96NT1 182 aaPredicted RBP19.77■□□□□ 0.75
LTBR-201ENST00000228918 RRP9O43818 475 aaKnown RBP19.76■□□□□ 0.75
LTBR-201ENST00000228918 HSPA4P34932 840 aa19.76■□□□□ 0.75
LTBR-201ENST00000228918 LGR6Q9HBX8 967 aa19.76■□□□□ 0.75
LTBR-201ENST00000228918 CHPF2Q9P2E5 772 aa19.76■□□□□ 0.75
LTBR-201ENST00000228918 SRGAP3O43295 1099 aa19.76■□□□□ 0.75
LTBR-201ENST00000228918 NBPF7P0C2Y1 421 aaPredicted RBP19.76■□□□□ 0.75
LTBR-201ENST00000228918 BEND3Q5T5X7 828 aa19.76■□□□□ 0.75
LTBR-201ENST00000228918 FOXD4L5Q5VV16 416 aaPredicted RBP19.76■□□□□ 0.75
LTBR-201ENST00000228918 FOXD4L4Q8WXT5 416 aaPredicted RBP19.76■□□□□ 0.75
LTBR-201ENST00000228918 DNAAF4Q8WXU2 420 aa19.76■□□□□ 0.75
LTBR-201ENST00000228918 KIF1BPQ96EK5 621 aa19.76■□□□□ 0.75
LTBR-201ENST00000228918 RBSNQ9H1K0 784 aa19.76■□□□□ 0.75
LTBR-201ENST00000228918 PRIM1P49642 420 aaKnown RBP19.75■□□□□ 0.75
LTBR-201ENST00000228918 NOL8Q76FK4 1167 aaKnown RBP19.75■□□□□ 0.75
LTBR-201ENST00000228918 UPF3BQ9BZI7 483 aaKnown RBP19.75■□□□□ 0.75
LTBR-201ENST00000228918 TMEM63CQ9P1W3 806 aa19.75■□□□□ 0.75
LTBR-201ENST00000228918 MBD3O95983 291 aa19.74■□□□□ 0.75
LTBR-201ENST00000228918 CHMP4AQ9BY43 222 aa19.74■□□□□ 0.75
LTBR-201ENST00000228918 NSFL1CQ9UNZ2 370 aaKnown RBP19.74■□□□□ 0.75
LTBR-201ENST00000228918 RAD50Q92878 1312 aa19.74■□□□□ 0.75
LTBR-201ENST00000228918 PI4KAP2A4QPH2 592 aa19.73■□□□□ 0.75
LTBR-201ENST00000228918 HSP90AA2PQ14568 343 aaPredicted RBP19.73■□□□□ 0.75
LTBR-201ENST00000228918 PI4KAP1Q8N8J0 262 aa19.73■□□□□ 0.75
LTBR-201ENST00000228918 ADGRL3Q9HAR2 1447 aa19.73■□□□□ 0.75
LTBR-201ENST00000228918 SGSM2O43147 1006 aa19.73■□□□□ 0.75
LTBR-201ENST00000228918 ADCY9O60503 1353 aa19.73■□□□□ 0.75
LTBR-201ENST00000228918 KCNQ3O43525 872 aa19.72■□□□□ 0.75
LTBR-201ENST00000228918 MAP4K4O95819 1239 aaPredicted RBP19.72■□□□□ 0.75
LTBR-201ENST00000228918 LRSAM1Q6UWE0 723 aa19.72■□□□□ 0.75
LTBR-201ENST00000228918 ZSCAN30Q86W11 494 aa19.72■□□□□ 0.75
LTBR-201ENST00000228918 ZMYND15Q9H091 742 aa19.72■□□□□ 0.75
LTBR-201ENST00000228918 USP42Q9H9J4 1324 aaKnown RBP19.71■□□□□ 0.75
LTBR-201ENST00000228918 AKAP4Q5JQC9 854 aa19.71■□□□□ 0.75
LTBR-201ENST00000228918 CNTROBQ8N137 903 aa19.71■□□□□ 0.75
LTBR-201ENST00000228918 PDLIM2Q96JY6 352 aa19.71■□□□□ 0.75
LTBR-201ENST00000228918 PLEKHG5O94827 1062 aa19.7■□□□□ 0.74
LTBR-201ENST00000228918 TEFQ10587 303 aa19.7■□□□□ 0.74
LTBR-201ENST00000228918 HSP90AB4PQ58FF6 505 aa19.7■□□□□ 0.74
LTBR-201ENST00000228918 ZNF530Q6P9A1 599 aaPredicted RBP19.7■□□□□ 0.74
LTBR-201ENST00000228918 VSIG10Q8N0Z9 540 aa19.7■□□□□ 0.74
LTBR-201ENST00000228918 KCNH5Q8NCM2 988 aa19.7■□□□□ 0.74
LTBR-201ENST00000228918 LSG1Q9H089 658 aaKnown RBP19.7■□□□□ 0.74
LTBR-201ENST00000228918 SYCE3A1L190 88 aa19.69■□□□□ 0.74
LTBR-201ENST00000228918 BTBD11A6QL63 1104 aa19.69■□□□□ 0.74
LTBR-201ENST00000228918 ANXA1P04083 346 aa19.69■□□□□ 0.74
LTBR-201ENST00000228918 PXDNQ92626 1479 aa19.69■□□□□ 0.74
LTBR-201ENST00000228918 NCAPD2Q15021 1401 aa19.69■□□□□ 0.74
LTBR-201ENST00000228918 MTX1Q13505 466 aa19.69■□□□□ 0.74
LTBR-201ENST00000228918 TTC41PQ6P2S7 1318 aa19.68■□□□□ 0.74
LTBR-201ENST00000228918 LRRC59Q96AG4 307 aaKnown RBP19.68■□□□□ 0.74
LTBR-201ENST00000228918 SNX14Q9Y5W7 946 aa19.68■□□□□ 0.74
LTBR-201ENST00000228918 OVOS2A0A0G2JMS6 1433 aa19.68■□□□□ 0.74
LTBR-201ENST00000228918 PLEKHO1Q53GL0 409 aaPredicted RBP19.68■□□□□ 0.74
LTBR-201ENST00000228918 HS1BP3Q53T59 392 aa19.68■□□□□ 0.74
LTBR-201ENST00000228918 WDR33Q9C0J8 1336 aaKnown RBP19.67■□□□□ 0.74
LTBR-201ENST00000228918 TTC14Q96N46 770 aa19.67■□□□□ 0.74
LTBR-201ENST00000228918 RPAP1Q9BWH6 1393 aaPredicted RBP19.67■□□□□ 0.74
LTBR-201ENST00000228918 ZBTB7CA1YPR0 619 aa19.67■□□□□ 0.74
LTBR-201ENST00000228918 MPRIPQ6WCQ1 1025 aa19.67■□□□□ 0.74
LTBR-201ENST00000228918 DBF4Q9UBU7 674 aaPredicted RBP19.67■□□□□ 0.74
LTBR-201ENST00000228918 PSME1Q06323 249 aa19.66■□□□□ 0.74
LTBR-201ENST00000228918 TCHHQ07283 1943 aa19.66■□□□□ 0.74
LTBR-201ENST00000228918 CAMTA1Q9Y6Y1 1673 aa19.66■□□□□ 0.74
LTBR-201ENST00000228918 SLIT3O75094 1523 aa19.66■□□□□ 0.74
LTBR-201ENST00000228918 RNMTO43148 476 aaKnown RBP19.65■□□□□ 0.74
LTBR-201ENST00000228918 GLRX3O76003 335 aaKnown RBP19.65■□□□□ 0.74
LTBR-201ENST00000228918 AMOTQ4VCS5 1084 aa19.65■□□□□ 0.74
LTBR-201ENST00000228918 SIPA1L3O60292 1781 aaPredicted RBP19.65■□□□□ 0.74
LTBR-201ENST00000228918 RASEFQ8IZ41 740 aa19.65■□□□□ 0.74
LTBR-201ENST00000228918 RBM33Q96EV2 1170 aaKnown RBP19.65■□□□□ 0.74
LTBR-201ENST00000228918 HEG1Q9ULI3 1381 aa19.64■□□□□ 0.74
LTBR-201ENST00000228918 ALDH1L1O75891 902 aa19.64■□□□□ 0.74
LTBR-201ENST00000228918 OS9Q13438 667 aaPredicted RBP19.64■□□□□ 0.74
LTBR-201ENST00000228918 ESCO1Q5FWF5 840 aa19.64■□□□□ 0.74
LTBR-201ENST00000228918 MSNP26038 577 aaKnown RBP19.64■□□□□ 0.73
LTBR-201ENST00000228918 CWC27Q6UX04 472 aaKnown RBP19.64■□□□□ 0.73
LTBR-201ENST00000228918 ZNF142P52746 1687 aaPredicted RBP19.64■□□□□ 0.73
LTBR-201ENST00000228918 AK2P54819 239 aa19.63■□□□□ 0.73
LTBR-201ENST00000228918 KIAA1211Q6ZU35 1233 aa19.63■□□□□ 0.73
LTBR-201ENST00000228918 MAP3K2Q9Y2U5 619 aa19.63■□□□□ 0.73
LTBR-201ENST00000228918 C1orf141Q5JVX7 400 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 1836.3 ms